C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000WN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184164-ENSG00000198355 CGP 9606 22:49918167-49964080
GeneTranscriptPositionBiotype
ENSG00000182858 (ALG12)
ALG12, alpha-1,6-mannosyltransferase 		ENST00000330817 (ALG12-001) 49900229-49918458 protein_coding
ENST00000486602 (ALG12-003) 49903650-49907918 protein_coding
ENST00000492791 (ALG12-002) 49903961-49910088 nonsense_mediated_decay
ENSG00000184164 (CRELD2)
cysteine-rich with EGF-like domains 2 		ENST00000328268 (CRELD2-001) 49918696-49927528 protein_coding
ENST00000403427 (CRELD2-005) 49918733-49927534 protein_coding
ENST00000404488 (CRELD2-002) 49918635-49927540 protein_coding
ENST00000407217 (CRELD2-003) 49918733-49927534 protein_coding
ENST00000444954 (CRELD2-011) 49921584-49925129 processed_transcript
ENST00000450207 (CRELD2-008) 49918167-49922707 protein_coding
ENST00000462253 (CRELD2-010) 49921307-49923264 processed_transcript
ENST00000482956 (CRELD2-006) 49918770-49923400 retained_intron
ENST00000483652 (CRELD2-004) 49918733-49926505 retained_intron
ENST00000487969 (CRELD2-007) 49923210-49927528 retained_intron
ENST00000498354 (CRELD2-009) 49921289-49922033 processed_transcript
ENSG00000198355 (PIM3)
Pim-3 proto-oncogene, serine/threonine kinase 		ENST00000360612 (PIM3-001) 49960513-49964080 protein_coding
ENST00000467480 (PIM3-002) 49960768-49961646 retained_intron
ENSG00000276753 (MIR6821)
microRNA 6821 		ENST00000617625 (MIR6821-201) 49962866-49962939 miRNA
ENSG00000278869 (CITF22-49E9.3)
 ENST00000623759 (CITF22-49E9.3-001) 49933198-49934074 lincRNA
CIL_0000WN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023272-ENSMUSG00000035828 CGP 10090 15:88819646-88865718
GeneTranscriptPositionBiotype
ENSMUSG00000023272 (Creld2)
cysteine-rich with EGF-like domains 2 		ENSMUST00000024042 (Creld2-201) 88819646-88826681 protein_coding
ENSMUSG00000035828 (Pim3)
proviral integration site 3 		ENSMUST00000042818 (Pim3-201) 88862186-88865718 protein_coding
ENSMUSG00000093831 (Gm23144)
predicted gene, 23144 		ENSMUST00000180226 (Gm23144-201) 88835300-88835406 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WN_0001ENSG00000182858ENST00000330817ENST00000486602ENST00000492791ENSG00000184164ENST00000328268ENST00000403427ENST00000404488ENST00000407217ENST00000444954ENST00000450207ENST00000462253ENST00000482956ENST00000483652ENST00000487969ENST00000498354ENSG00000198355ENST00000360612ENST00000467480ENSG00000276753ENST00000617625ENSG00000278869ENST00000623759CIL_0000WN_0002ENSMUSG00000023272ENSMUST00000024042ENSMUSG00000035828ENSMUST00000042818ENSMUSG00000093831ENSMUST00000180226
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WN_0001ENSG00000182858ENST00000330817ENST00000492791ENSG00000184164ENST00000328268ENST00000404488ENST00000407217ENST00000450207ENST00000482956ENST00000483652ENST00000487969ENSG00000198355ENST00000360612ENST00000467480ENSG00000276753ENST00000617625ENSG00000278869ENST00000623759CIL_0000WN_0002ENSMUSG00000023272ENSMUST00000024042ENSMUSG00000035828ENSMUST00000042818ENSMUSG00000093831ENSMUST00000180226
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182858 ENST00000330817 N/A 2.026±0.00 0.191±0.00 N/A N/A 0.930±0.00 N/A N/A N/A N/A N/A 1.821±0.02 1.593±0.00 N/A
ENST00000486602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492791 8.361±0.00 N/A N/A N/A 9.853±0.00 9.981±0.00 4.100±0.00 N/A N/A N/A 2.471±1.19 N/A 12.436±0.00 N/A
ENSG00000184164 ENST00000328268 12.742±0.00 30.451±0.00 N/A 4.656±2.30 7.056±6.15 17.545±0.00 5.408±0.00 53.528±0.00 50.659±0.00 7.956±6.15 2.385±0.00 24.128±12.53 18.344±2.23 24.114±11.41
ENST00000403427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404488 N/A N/A 0.713±0.00 1.851±0.00 2.682±0.00 2.329±0.00 1.376±0.65 1.657±0.00 6.576±5.29 1.540±0.00 2.812±0.00 N/A N/A 19.821±0.00
ENST00000407217 N/A N/A N/A 1.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450207 N/A N/A N/A N/A 2.032±0.00 N/A 0.976±0.00 N/A N/A N/A N/A 23.851±20.83 14.507±0.00 24.935±0.00
ENST00000462253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482956 N/A N/A N/A N/A N/A N/A N/A N/A 2.151±0.00 N/A N/A N/A N/A N/A
ENST00000483652 N/A N/A N/A N/A N/A 0.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487969 N/A N/A N/A 1.115±0.00 0.514±0.00 N/A N/A N/A N/A 1.965±0.00 N/A N/A N/A N/A
ENST00000498354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198355 ENST00000360612 31.551±0.00 62.193±0.00 1.743±0.00 5.603±2.17 19.261±15.12 16.416±13.74 11.756±11.33 27.582±26.84 14.285±11.95 79.639±76.50 29.623±23.56 33.507±27.44 44.722±10.62 32.530±3.09
ENST00000467480 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.512±0.00 N/A N/A N/A N/A
ENSG00000276753 ENST00000617625 0.730±0.00 1.485±0.00 N/A N/A 3.245±0.00 0.721±0.00 0.812±0.00 0.829±0.00 3.899±0.00 4.141±0.00 N/A N/A N/A 0.719±0.00
ENSG00000278869 ENST00000623759 0.589±0.00 1.394±0.00 N/A N/A 0.877±0.00 N/A 0.235±0.00 0.220±0.00 0.235±0.15 N/A 0.263±0.00 0.395±0.33 0.706±0.29 0.097±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023272 ENSMUST00000024042 14.266±4.21 22.631±16.02 16.678±2.62 14.430±4.89 12.055±3.28 25.472±6.06 7.995±0.23 14.442±2.52 19.549±5.90 15.761±6.66 2.529±0.46 66.291±25.76 93.310±32.92 212.936±5.57
ENSMUSG00000035828 ENSMUST00000042818 25.746±9.45 57.020±6.94 5.395±0.16 7.010±2.15 21.963±4.58 25.828±1.73 15.215±5.27 31.921±2.67 7.123±4.60 31.290±9.55 9.584±2.46 22.222±5.48 20.680±8.85 4.045±1.24
ENSMUSG00000093831 ENSMUST00000180226 N/A N/A N/A N/A 2977.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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