C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000X9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013153-ENSDARG00000077326 CGP 7955 16:33178778-33236091
GeneTranscriptPositionBiotype
ENSDARG00000013153 (dennd3b)
DENN/MADD domain containing 3b 		ENSDART00000035583 (dennd3b-201) 33179372-33207471 protein_coding
ENSDART00000124555 (dennd3b-202) 33179372-33183716 protein_coding
ENSDART00000131356 (dennd3b-003) 33183611-33189396 protein_coding
ENSDART00000141403 (dennd3b-002) 33178778-33182079 protein_coding
ENSDART00000143996 (dennd3b-001) 33197298-33207488 protein_coding
ENSDARG00000077326 (slc45a4)
solute carrier family 45, member 4 		ENSDART00000085761 (slc45a4-001) 33211929-33236091 protein_coding
ENSDART00000132643 (slc45a4-002) 33230746-33235209 protein_coding
ENSDART00000156804 (slc45a4-201) 33213044-33231006 protein_coding
CIL_0000X9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105339-ENSG00000022567 CGP 9606 8:141117278-141308305
GeneTranscriptPositionBiotype
ENSG00000022567 (SLC45A4)
solute carrier family 45, member 4 		ENST00000024061 (SLC45A4-001) 141210601-141228574 protein_coding
ENST00000517878 (SLC45A4-003) 141210529-141254229 protein_coding
ENST00000519067 (SLC45A4-002) 141207166-141228570 protein_coding
ENST00000519986 (SLC45A4-004) 141219747-141230348 protein_coding
ENST00000520137 (SLC45A4-005) 141218774-141308305 protein_coding
ENST00000521804 (SLC45A4-006) 141254101-141308292 processed_transcript
ENSG00000105339 (DENND3)
DENN/MADD domain containing 3 		ENST00000262585 (DENND3-201) 141128621-141195796 protein_coding
ENST00000424248 (DENND3-202) 141136626-141195511 protein_coding
ENST00000517813 (DENND3-006) 141184488-141195807 retained_intron
ENST00000517985 (DENND3-015) 141178121-141185458 protein_coding
ENST00000518198 (DENND3-003) 141128621-141142511 nonsense_mediated_decay
ENST00000518249 (DENND3-016) 141141203-141143008 protein_coding
ENST00000518347 (DENND3-011) 141128612-141141455 protein_coding
ENST00000518668 (DENND3-002) 141128779-141195808 protein_coding
ENST00000518806 (DENND3-020) 141177087-141185223 processed_transcript
ENST00000519291 (DENND3-010) 141117278-141141276 protein_coding
ENST00000519811 (DENND3-001) 141128638-141195808 protein_coding
ENST00000520482 (DENND3-005) 141157395-141176266 retained_intron
ENST00000520571 (DENND3-009) 141188898-141190624 retained_intron
ENST00000520725 (DENND3-014) 141192331-141193070 protein_coding
ENST00000520986 (DENND3-012) 141128649-141151837 protein_coding
ENST00000521477 (DENND3-018) 141155894-141166233 processed_transcript
ENST00000521835 (DENND3-008) 141191274-141195799 retained_intron
ENST00000523015 (DENND3-017) 141143914-141150889 retained_intron
ENST00000523058 (DENND3-021) 141128675-141150908 protein_coding
ENST00000523066 (DENND3-019) 141173505-141176652 processed_transcript
ENST00000523308 (DENND3-007) 141188349-141195802 protein_coding
ENST00000523530 (DENND3-013) 141191274-141192901 retained_intron
ENSG00000253210 (RP11-809O17.1)
 ENST00000517908 (RP11-809O17.1-002) 141126291-141129961 antisense
ENST00000520885 (RP11-809O17.1-001) 141126044-141128121 antisense
ENSG00000253307 (RP11-10J21.4)
 ENST00000517658 (RP11-10J21.4-001) 141252286-141253292 antisense
ENSG00000254197 (RP11-10J21.5)
 ENST00000520606 (RP11-10J21.5-001) 141278228-141292862 lincRNA
ENSG00000280035 (RP11-10J21.2)
 ENST00000624864 (RP11-10J21.2-001) 141224288-141226947 TEC
CIL_0000X9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036661-ENSMUSG00000079020 CGP 10090 15:73512560-73645762
GeneTranscriptPositionBiotype
ENSMUSG00000036661 (Dennd3)
DENN/MADD domain containing 3 		ENSMUST00000043414 (Dennd3-001) 73512560-73572242 protein_coding
ENSMUST00000159322 (Dennd3-006) 73564862-73567077 retained_intron
ENSMUST00000160267 (Dennd3-003) 73557636-73568107 nonsense_mediated_decay
ENSMUST00000160727 (Dennd3-007) 73567078-73570899 retained_intron
ENSMUST00000162488 (Dennd3-002) 73522342-73570954 protein_coding
ENSMUST00000162824 (Dennd3-005) 73518614-73523545 processed_transcript
ENSMUST00000173292 (Dennd3-008) 73512672-73572099 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000X9_0001ENSDARG00000013153ENSDART00000035583ENSDART00000124555ENSDART00000131356ENSDART00000141403ENSDART00000143996ENSDARG00000077326ENSDART00000085761ENSDART00000132643ENSDART00000156804CIL_0000X9_0002ENSG00000022567ENST00000024061ENST00000517878ENST00000519067ENST00000519986ENST00000520137ENST00000521804ENSG00000105339ENST00000262585ENST00000424248ENST00000517813ENST00000517985ENST00000518198ENST00000518249ENST00000518347ENST00000518668ENST00000518806ENST00000519291ENST00000519811ENST00000520482ENST00000520571ENST00000520725ENST00000520986ENST00000521477ENST00000521835ENST00000523015ENST00000523058ENST00000523066ENST00000523308ENST00000523530ENSG00000253210ENST00000517908ENST00000520885ENSG00000253307ENST00000517658ENSG00000254197ENST00000520606ENSG00000280035ENST00000624864CIL_0000X9_0003ENSMUSG00000036661ENSMUST00000043414ENSMUST00000159322ENSMUST00000160267ENSMUST00000160727ENSMUST00000162488ENSMUST00000162824ENSMUST00000173292
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000X9_0001ENSDARG00000013153ENSDART00000035583ENSDART00000124555ENSDART00000131356ENSDART00000141403ENSDART00000143996ENSDARG00000077326ENSDART00000085761ENSDART00000156804CIL_0000X9_0002ENSG00000022567ENST00000024061ENST00000517878ENST00000519067ENST00000521804ENSG00000105339ENST00000262585ENST00000424248ENST00000517813ENST00000517985ENST00000518668ENST00000518806ENST00000519811ENST00000520482ENST00000521835ENST00000523308ENSG00000253210ENST00000517908ENST00000520885ENSG00000253307ENST00000517658ENSG00000254197ENST00000520606ENSG00000280035ENST00000624864CIL_0000X9_0003ENSMUSG00000036661ENSMUST00000043414ENSMUST00000160727ENSMUST00000162488ENSMUST00000173292
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013153 ENSDART00000035583 N/A N/A N/A 0.043±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000124555 N/A N/A N/A N/A N/A N/A 0.666±0.00 N/A 0.121±0.00 N/A 1.343±0.00 N/A N/A N/A
ENSDART00000131356 N/A N/A N/A 0.049±0.00 N/A N/A 0.458±0.06 N/A 0.164±0.00 N/A 1.016±0.00 N/A N/A N/A
ENSDART00000141403 N/A N/A N/A 0.216±0.00 N/A N/A 0.839±0.18 17.734±7.45 N/A N/A N/A N/A N/A N/A
ENSDART00000143996 N/A N/A N/A 0.082±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000077326 ENSDART00000085761 N/A N/A N/A 2.633±0.73 N/A N/A 3.349±0.71 5.864±1.10 0.234±0.00 N/A 1.560±0.00 N/A N/A N/A
ENSDART00000132643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156804 N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000022567 ENST00000024061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A
ENST00000517878 0.637±0.00 1.223±0.00 N/A 2.017±0.00 0.609±0.24 0.471±0.00 0.472±0.21 0.276±0.00 1.112±0.00 0.327±0.00 0.336±0.00 2.520±2.74 3.538±1.29 7.567±0.00
ENST00000519067 N/A 0.241±0.00 N/A 0.663±0.00 0.520±0.00 N/A 0.159±0.00 N/A 0.258±0.17 1.055±0.00 0.303±0.26 0.675±0.01 0.463±0.00 N/A
ENST00000519986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521804 N/A N/A 3.886±0.00 24.104±0.00 5.607±0.00 2.220±0.00 3.409±0.00 N/A 10.450±0.00 1.843±0.00 N/A 10.833±0.00 N/A N/A
ENSG00000105339 ENST00000262585 5.772±0.00 N/A N/A 1.492±0.00 1.927±0.00 1.355±0.00 3.179±0.00 4.155±0.00 0.586±0.00 7.439±0.00 0.439±0.00 1.075±0.06 3.650±0.00 1.714±0.00
ENST00000424248 6.556±0.00 4.447±0.00 N/A 2.207±0.00 1.860±0.00 1.054±0.35 N/A 1.097±0.82 N/A 5.546±0.00 N/A 2.172±0.00 1.843±0.87 N/A
ENST00000517813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.106±0.00 N/A N/A
ENST00000517985 N/A N/A N/A N/A N/A N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A
ENST00000518198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518668 N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A 0.463±0.00 1.460±0.00 1.285±0.04 N/A
ENST00000518806 N/A N/A N/A N/A 2.967±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519811 2.543±0.00 N/A N/A 1.581±0.00 1.208±0.00 1.628±1.07 2.014±0.00 N/A N/A 4.568±1.48 0.461±0.00 1.015±0.12 1.784±0.48 N/A
ENST00000520482 N/A N/A N/A N/A 2.525±0.00 1.159±0.00 N/A 0.704±0.00 0.787±0.00 5.392±0.00 0.423±0.00 N/A N/A N/A
ENST00000520571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521835 N/A N/A 1.283±0.00 N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A 1.969±0.00
ENST00000523015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523308 N/A 4.876±0.00 N/A N/A N/A 0.983±0.00 N/A N/A 1.006±0.00 N/A 0.385±0.00 2.665±0.00 N/A N/A
ENST00000523530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253210 ENST00000517908 N/A N/A N/A 0.133±0.00 N/A 0.113±0.00 N/A N/A 0.795±0.00 N/A N/A N/A 0.213±0.00 N/A
ENST00000520885 N/A 1.295±0.00 N/A 0.646±0.00 0.648±0.00 0.347±0.19 1.141±0.73 0.457±0.00 0.120±0.02 0.253±0.00 0.192±0.00 1.217±0.68 0.744±0.09 2.198±0.85
ENSG00000253307 ENST00000517658 0.226±0.00 0.251±0.00 0.792±0.00 0.276±0.00 0.343±0.14 0.784±0.00 N/A N/A N/A 1.178±0.47 N/A 0.163±0.03 0.167±0.00 0.515±0.32
ENSG00000254197 ENST00000520606 N/A 0.078±0.00 2.186±0.00 N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A 0.169±0.00
ENSG00000280035 ENST00000624864 0.021±0.00 0.211±0.00 0.148±0.00 0.130±0.00 0.264±0.16 0.027±0.00 0.058±0.03 0.071±0.01 0.087±0.07 0.343±0.22 0.059±0.00 0.074±0.04 0.077±0.04 0.086±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036661 ENSMUST00000043414 3.572±0.64 2.013±0.52 2.870±0.04 0.404±0.00 4.440±1.23 4.048±0.60 2.375±0.89 8.873±1.22 0.833±0.35 26.286±3.92 0.650±0.29 3.633±0.87 0.955±0.62 0.487±0.14
ENSMUST00000159322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.603±0.00 N/A
ENSMUST00000162488 N/A N/A N/A N/A N/A N/A 0.653±0.00 N/A N/A N/A N/A 0.985±0.20 N/A 0.526±0.00
ENSMUST00000162824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173292 N/A N/A N/A 0.400±0.19 N/A N/A N/A 1.682±0.13 0.211±0.11 N/A 0.295±0.00 0.919±0.00 0.399±0.21 0.777±0.38

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