C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ZY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095596-ENSG00000138119 CGP 9606 10:93073475-93482317
GeneTranscriptPositionBiotype
ENSG00000095596 (CYP26A1)
cytochrome P450, family 26, subfamily A, polypeptide 1 		ENST00000224356 (CYP26A1-002) 93073890-93077890 protein_coding
ENST00000371531 (CYP26A1-001) 93073475-93077884 protein_coding
ENST00000622925 (CYP26A1-006) 93074078-93075275 retained_intron
ENST00000623162 (CYP26A1-004) 93075629-93077319 retained_intron
ENST00000624589 (CYP26A1-003) 93074312-93077479 nonsense_mediated_decay
ENST00000625202 (CYP26A1-005) 93076333-93077082 retained_intron
ENSG00000138119 (MYOF)
myoferlin 		ENST00000358334 (MYOF-004) 93306430-93482194 protein_coding
ENST00000359263 (MYOF-005) 93306430-93482194 protein_coding
ENST00000371488 (MYOF-002) 93425741-93482194 protein_coding
ENST00000371489 (MYOF-003) 93397185-93482317 protein_coding
ENST00000463743 (MYOF-006) 93306429-93379987 nonsense_mediated_decay
ENST00000474161 (MYOF-009) 93323118-93323675 retained_intron
ENST00000475358 (MYOF-007) 93337528-93340249 processed_transcript
ENST00000485212 (MYOF-008) 93324270-93329773 processed_transcript
ENST00000488645 (MYOF-001) 93426071-93482194 processed_transcript
ENSG00000213432 (RP11-624L12.1)
 ENST00000394133 (RP11-624L12.1-001) 93284004-93284558 processed_pseudogene
ENSG00000237417 (XRCC6P1)
X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 1 		ENST00000420392 (XRCC6P1-001) 93206857-93209627 processed_pseudogene
CIL_0000ZY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024987-ENSMUSG00000048612 CGP 10090 19:37697808-38043577
GeneTranscriptPositionBiotype
ENSMUSG00000024987 (Cyp26a1)
cytochrome P450, family 26, subfamily a, polypeptide 1 		ENSMUST00000025946 (Cyp26a1-201) 37697808-37701528 protein_coding
ENSMUSG00000048612 (Myof)
myoferlin 		ENSMUST00000041475 (Myof-201) 37899036-38043577 protein_coding
ENSMUST00000172095 (Myof-202) 37899036-38043577 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZY_0001ENSG00000095596ENST00000224356ENST00000371531ENST00000622925ENST00000623162ENST00000624589ENST00000625202ENSG00000138119ENST00000358334ENST00000359263ENST00000371488ENST00000371489ENST00000463743ENST00000474161ENST00000475358ENST00000485212ENST00000488645ENSG00000213432ENST00000394133ENSG00000237417ENST00000420392CIL_0000ZY_0002ENSMUSG00000024987ENSMUST00000025946ENSMUSG00000048612ENSMUST00000041475ENSMUST00000172095
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZY_0001ENSG00000095596ENST00000224356ENST00000622925ENST00000623162ENST00000624589ENST00000625202ENSG00000138119ENST00000358334ENST00000359263ENST00000463743ENSG00000213432ENST00000394133ENSG00000237417ENST00000420392CIL_0000ZY_0002ENSMUSG00000024987ENSMUST00000025946ENSMUSG00000048612ENSMUST00000041475ENSMUST00000172095
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095596 ENST00000224356 N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.261±0.00 N/A N/A N/A 3.226±0.00 0.055±0.00
ENST00000371531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622925 0.112±0.00 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A 0.067±0.00 N/A 0.111±0.01
ENST00000623162 N/A N/A N/A 0.463±0.00 0.086±0.00 N/A 0.164±0.00 N/A N/A N/A N/A 0.037±0.00 N/A N/A
ENST00000624589 0.032±0.00 0.014±0.00 N/A 0.319±0.01 N/A N/A N/A N/A 1.425±0.00 0.036±0.00 N/A N/A 2.677±1.51 0.057±0.01
ENST00000625202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 0.032±0.00
ENSG00000138119 ENST00000358334 N/A N/A 0.738±0.00 N/A 1.687±0.00 N/A N/A 0.056±0.00 0.182±0.00 1.242±0.00 N/A 1.449±0.00 3.829±0.00 N/A
ENST00000359263 15.542±0.00 6.485±0.00 0.714±0.00 0.439±0.25 7.810±0.22 6.077±2.85 2.870±0.00 7.925±0.00 4.513±4.23 2.458±0.42 1.697±0.00 5.390±0.70 10.418±2.95 6.082±0.00
ENST00000371488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463743 5.782±0.00 3.246±0.00 0.643±0.00 0.330±0.00 7.799±0.00 4.730±0.00 2.876±0.00 3.727±0.00 0.154±0.00 4.322±0.00 0.634±0.00 2.972±0.86 6.079±1.56 3.445±0.00
ENST00000474161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213432 ENST00000394133 0.127±0.00 0.371±0.00 N/A 0.136±0.00 0.104±0.00 0.390±0.00 0.025±0.00 0.161±0.00 0.072±0.00 0.447±0.00 0.047±0.00 0.122±0.04 0.060±0.00 0.143±0.00
ENSG00000237417 ENST00000420392 N/A 0.015±0.00 N/A 0.015±0.00 0.105±0.00 0.007±0.00 N/A 0.007±0.00 0.086±0.00 0.050±0.00 0.020±0.00 0.010±0.00 0.087±0.05 0.062±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024987 ENSMUST00000025946 0.323±0.25 N/A 0.054±0.01 0.079±0.06 0.145±0.10 0.042±0.02 0.149±0.02 0.149±0.06 24.532±38.99 0.063±0.05 0.042±0.01 5.921±3.21 0.259±0.15 0.646±0.29
ENSMUSG00000048612 ENSMUST00000041475 5.176±2.03 0.931±0.43 43.729±11.96 0.333±0.18 3.090±0.80 3.991±1.70 0.573±0.21 4.295±0.96 0.499±0.70 12.562±0.28 0.556±0.21 7.828±8.08 29.851±21.38 0.291±0.10
ENSMUST00000172095 N/A 0.445±0.15 N/A N/A 0.573±0.00 N/A N/A N/A 0.068±0.01 N/A N/A 2.263±1.41 N/A N/A

Loading