C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000103_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095464-ENSG00000148690 CGP 9606 10:93612588-93702572
GeneTranscriptPositionBiotype
ENSG00000095464 (PDE6C)
phosphodiesterase 6C, cGMP-specific, cone, alpha prime
ENST00000371447 (PDE6C-001) 93612588-93666010 protein_coding
ENST00000475427 (PDE6C-002) 93662056-93665673 processed_transcript
ENSG00000148690 (FRA10AC1)
fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
ENST00000359204 (FRA10AC1-001) 93667883-93702572 protein_coding
ENST00000460752 (FRA10AC1-002) 93669624-93675304 processed_transcript
ENST00000462771 (FRA10AC1-003) 93670775-93673031 processed_transcript
ENST00000472153 (FRA10AC1-005) 93684055-93685463 processed_transcript
ENST00000482719 (FRA10AC1-006) 93685253-93687941 processed_transcript
ENST00000483229 (FRA10AC1-004) 93669679-93672091 processed_transcript
CIL_000103_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024992-ENSMUSG00000054237 CGP 10090 19:38132781-38224138
GeneTranscriptPositionBiotype
ENSMUSG00000024992 (Pde6c)
phosphodiesterase 6C, cGMP specific, cone, alpha prime
ENSMUST00000025956 (Pde6c-201) 38132781-38183947 protein_coding
ENSMUST00000112329 (Pde6c-202) 38132781-38183947 protein_coding
ENSMUSG00000054237 (Fra10ac1)
FRA10AC1 homolog (human)
ENSMUST00000067167 (Fra10ac1-201) 38188481-38224138 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000103_0001ENSG00000095464ENST00000371447ENST00000475427ENSG00000148690ENST00000359204ENST00000460752ENST00000462771ENST00000472153ENST00000482719ENST00000483229CIL_000103_0002ENSMUSG00000024992ENSMUST00000025956ENSMUST00000112329ENSMUSG00000054237ENSMUST00000067167
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000103_0001ENSG00000095464ENST00000371447ENST00000475427ENSG00000148690ENST00000359204ENST00000460752ENST00000472153ENST00000482719ENST00000483229CIL_000103_0002ENSMUSG00000024992ENSMUST00000025956ENSMUST00000112329ENSMUSG00000054237ENSMUST00000067167
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095464 ENST00000371447 0.020±0.00 N/A N/A 0.076±0.00 0.035±0.01 0.060±0.00 0.033±0.01 N/A N/A 0.040±0.00 N/A 0.052±0.02 0.017±0.00 0.041±0.00
ENST00000475427 N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.309±0.00 0.038±0.00 N/A
ENSG00000148690 ENST00000359204 6.488±0.00 2.893±0.00 2.221±0.00 5.747±1.92 4.416±0.00 5.307±4.15 2.595±1.33 4.072±0.00 1.989±0.75 1.673±0.65 1.586±0.99 8.244±3.95 3.545±2.19 9.156±2.67
ENST00000460752 N/A 1.061±0.00 N/A N/A 0.951±0.52 0.463±0.00 0.494±0.00 0.355±0.00 0.384±0.21 0.890±0.63 N/A 0.963±0.16 N/A 1.548±0.89
ENST00000462771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.034±0.00 N/A N/A N/A
ENST00000482719 N/A N/A N/A N/A 6.256±0.00 N/A N/A N/A 6.277±0.00 N/A 1.623±0.00 N/A N/A N/A
ENST00000483229 N/A N/A N/A N/A N/A N/A N/A N/A 2.455±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024992 ENSMUST00000025956 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.563±0.31 0.062±0.02
ENSMUST00000112329 N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A 0.065±0.03 N/A N/A 0.009±0.00 0.025±0.00 0.040±0.00
ENSMUSG00000054237 ENSMUST00000067167 2.489±0.73 4.518±1.90 6.148±0.32 7.524±1.45 2.464±0.87 1.941±0.28 2.641±0.88 3.549±0.64 5.220±2.45 3.413±0.87 5.453±0.22 6.014±4.49 6.350±2.19 8.582±7.82

Loading