C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000129_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023002-ENSDARG00000027017 CGP 7955 20:13056182-13226692
GeneTranscriptPositionBiotype
ENSDARG00000023002 (dtl)
denticleless homolog (Drosophila) 		ENSDART00000034098 (dtl-001) 13056182-13088939 protein_coding
ENSDARG00000027017 (ppp2r5a)
protein phosphatase 2, regulatory subunit B', alpha isoform 		ENSDART00000025644 (ppp2r5a-001) 13090153-13226692 protein_coding
ENSDART00000157067 (ppp2r5a-201) 13149253-13224184 protein_coding
ENSDARG00000094659 (si:dkey-18c8.3)
si:dkey-18c8.3 		ENSDART00000142724 (si:dkey-18c8.3-001) 13118840-13123526 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_000129_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143476-ENSG00000066027 CGP 9606 1:212035553-212361863
GeneTranscriptPositionBiotype
ENSG00000066027 (PPP2R5A)
protein phosphatase 2, regulatory subunit B', alpha 		ENST00000261461 (PPP2R5A-001) 212285537-212361863 protein_coding
ENST00000479259 (PPP2R5A-003) 212301863-212342280 processed_transcript
ENST00000498123 (PPP2R5A-004) 212301863-212319545 processed_transcript
ENST00000498129 (PPP2R5A-002) 212301863-212342280 processed_transcript
ENST00000537030 (PPP2R5A-005) 212301806-212360922 protein_coding
ENSG00000143476 (DTL)
denticleless E3 ubiquitin protein ligase homolog (Drosophila) 		ENST00000366991 (DTL-001) 212035577-212105006 protein_coding
ENST00000463791 (DTL-004) 212080369-212100426 processed_transcript
ENST00000475419 (DTL-002) 212035846-212104594 processed_transcript
ENST00000489149 (DTL-003) 212072074-212100700 processed_transcript
ENST00000496442 (DTL-005) 212100646-212107400 processed_transcript
ENST00000542077 (DTL-201) 212035553-212105006 protein_coding
ENSG00000201544 (SNORA16B)
small nucleolar RNA, H/ACA box 16B 		ENST00000364674 (SNORA16B-201) 212352816-212352950 snoRNA
ENSG00000212044 (AL360091.1)
 ENST00000390755 (AL360091.1-201) 212349978-212350069 miRNA
ENSG00000220749 (RPL21P28)
ribosomal protein L21 pseudogene 28 		ENST00000401418 (RPL21P28-001) 212051524-212052006 processed_pseudogene
ENSG00000225338 (RP11-384C4.3)
 ENST00000416139 (RP11-384C4.3-001) 212309051-212309518 processed_pseudogene
ENSG00000226251 (RP11-15I11.3)
 ENST00000412221 (RP11-15I11.3-002) 212225280-212226538 lincRNA
ENST00000431307 (RP11-15I11.3-003) 212225280-212238977 lincRNA
ENST00000443448 (RP11-15I11.3-001) 212225278-212234546 lincRNA
ENSG00000229832 (RP11-384C4.2)
 ENST00000447949 (RP11-384C4.2-001) 212357418-212358353 sense_intronic
ENSG00000229983 (RP11-15I11.2)
 ENST00000444750 (RP11-15I11.2-001) 212168207-212190259 lincRNA
ENSG00000230063 (RP11-384C4.6)
 ENST00000446847 (RP11-384C4.6-001) 212297448-212299579 sense_intronic
ENSG00000234915 (RP11-384C4.7)
 ENST00000442146 (RP11-384C4.7-001) 212299495-212331713 antisense
ENSG00000252879 (RN7SKP98)
RNA, 7SK small nuclear pseudogene 98 		ENST00000517070 (RN7SKP98-201) 212099521-212099676 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000129_0001ENSDARG00000023002ENSDART00000034098ENSDARG00000027017ENSDART00000025644ENSDART00000157067ENSDARG00000094659ENSDART00000142724CIL_000129_0002ENSG00000066027ENST00000261461ENST00000479259ENST00000498123ENST00000498129ENST00000537030ENSG00000143476ENST00000366991ENST00000463791ENST00000475419ENST00000489149ENST00000496442ENST00000542077ENSG00000201544ENST00000364674ENSG00000212044ENST00000390755ENSG00000220749ENST00000401418ENSG00000225338ENST00000416139ENSG00000226251ENST00000412221ENST00000431307ENST00000443448ENSG00000229832ENST00000447949ENSG00000229983ENST00000444750ENSG00000230063ENST00000446847ENSG00000234915ENST00000442146ENSG00000252879ENST00000517070
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000129_0001ENSDARG00000023002ENSDART00000034098ENSDARG00000027017ENSDART00000025644ENSDARG00000094659ENSDART00000142724CIL_000129_0002ENSG00000066027ENST00000261461ENST00000537030ENSG00000143476ENST00000366991ENST00000475419ENST00000489149ENST00000496442ENST00000542077ENSG00000201544ENST00000364674ENSG00000212044ENST00000390755ENSG00000220749ENST00000401418ENSG00000225338ENST00000416139ENSG00000226251ENST00000412221ENST00000431307ENST00000443448ENSG00000229832ENST00000447949ENSG00000229983ENST00000444750ENSG00000230063ENST00000446847ENSG00000234915ENST00000442146ENSG00000252879ENST00000517070
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023002 ENSDART00000034098 N/A N/A N/A 0.158±0.06 N/A N/A 0.202±0.13 11.785±3.78 0.258±0.00 N/A 0.112±0.00 N/A N/A N/A
ENSDARG00000027017 ENSDART00000025644 N/A N/A N/A 2.263±0.72 N/A N/A 3.807±0.72 1.057±0.12 0.183±0.00 N/A N/A N/A N/A N/A
ENSDART00000157067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094659 ENSDART00000142724 N/A N/A N/A 0.026±0.00 N/A N/A 0.027±0.00 0.130±0.07 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066027 ENST00000261461 20.631±0.00 14.319±0.00 2.145±0.00 5.379±1.51 20.930±16.81 8.579±6.24 12.128±8.59 12.195±8.38 10.603±5.91 17.530±9.61 9.090±0.00 8.888±4.39 12.934±0.72 7.371±1.36
ENST00000479259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.641±0.00
ENSG00000143476 ENST00000366991 N/A 0.400±0.00 N/A N/A 0.236±0.04 0.789±0.00 N/A N/A N/A N/A N/A 0.495±0.29 1.420±0.57 6.091±0.00
ENST00000463791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475419 0.058±0.00 N/A 0.089±0.00 0.048±0.00 0.140±0.00 N/A 0.020±0.00 0.061±0.00 N/A 1.236±0.00 N/A 0.560±0.36 1.569±0.00 2.393±0.00
ENST00000489149 N/A 0.606±0.00 N/A N/A N/A N/A N/A N/A N/A 0.444±0.00 N/A N/A N/A 8.725±0.00
ENST00000496442 N/A N/A N/A N/A N/A N/A N/A 0.754±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542077 0.048±0.00 N/A N/A 0.026±0.00 N/A N/A 0.124±0.00 N/A 0.042±0.00 N/A N/A 0.811±0.00 0.635±0.00 N/A
ENSG00000201544 ENST00000364674 N/A 0.539±0.00 N/A N/A 0.930±0.00 N/A 12.597±0.00 N/A 0.355±0.00 1.104±0.00 N/A N/A N/A 0.264±0.14
ENSG00000212044 ENST00000390755 N/A N/A N/A N/A N/A N/A N/A 1.518±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000220749 ENST00000401418 0.190±0.00 0.281±0.00 N/A 0.057±0.00 0.027±0.00 0.104±0.00 N/A N/A 0.025±0.00 0.026±0.00 0.026±0.00 0.073±0.03 N/A 0.075±0.00
ENSG00000225338 ENST00000416139 0.357±0.00 0.535±0.00 N/A 0.229±0.07 0.117±0.00 0.328±0.00 0.069±0.00 0.467±0.00 0.034±0.00 N/A N/A 0.095±0.04 0.209±0.00 0.050±0.00
ENSG00000226251 ENST00000412221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 0.451±0.00 0.318±0.00
ENST00000431307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.00
ENST00000443448 N/A N/A N/A N/A 1.012±0.00 N/A 1.703±1.56 N/A 0.318±0.00 0.081±0.00 1.402±0.00 N/A N/A N/A
ENSG00000229832 ENST00000447949 0.108±0.00 0.264±0.00 N/A 0.115±0.00 0.259±0.00 0.164±0.03 0.989±0.00 0.129±0.00 N/A 0.729±0.00 N/A 0.348±0.26 0.120±0.00 0.075±0.05
ENSG00000229983 ENST00000444750 0.260±0.00 0.039±0.00 N/A 0.088±0.00 0.123±0.00 0.037±0.00 0.073±0.00 0.081±0.00 0.071±0.00 0.038±0.00 N/A 0.280±0.02 N/A 0.445±0.23
ENSG00000230063 ENST00000446847 N/A 0.208±0.00 N/A 0.063±0.00 0.417±0.39 0.345±0.00 0.132±0.11 0.086±0.00 N/A 0.558±0.48 0.550±0.00 0.132±0.15 N/A N/A
ENSG00000234915 ENST00000442146 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252879 ENST00000517070 N/A N/A N/A N/A N/A 2.820±0.00 N/A N/A N/A N/A N/A N/A N/A 0.114±0.00

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