C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00012Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010437-ENSDARG00000021569 CGP 7955 9:21814158-21886812
GeneTranscriptPositionBiotype
ENSDARG00000010437 (fam46c)
family with sequence similarity 46, member C 		ENSDART00000032307 (fam46c-201) 21814444-21819950 protein_coding
ENSDART00000139174 (fam46c-001) 21814392-21817392 protein_coding
ENSDART00000142787 (fam46c-002) 21814158-21816583 protein_coding
ENSDARG00000021569 (gdap2)
ganglioside induced differentiation associated protein 2 		ENSDART00000028247 (gdap2-201) 21839679-21886784 protein_coding
ENSDART00000124301 (gdap2-202) 21856303-21886784 protein_coding
ENSDART00000133321 (gdap2-001) 21857623-21886812 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00012Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183508-ENSG00000196505 CGP 9606 1:117605934-117929630
GeneTranscriptPositionBiotype
ENSG00000183508 (FAM46C)
family with sequence similarity 46, member C 		ENST00000369448 (FAM46C-001) 117605934-117628372 protein_coding
ENSG00000196505 (GDAP2)
ganglioside induced differentiation associated protein 2 		ENST00000369442 (GDAP2-002) 117877222-117929583 protein_coding
ENST00000369443 (GDAP2-001) 117863485-117929630 protein_coding
ENST00000464026 (GDAP2-006) 117882904-117899130 processed_transcript
ENST00000491626 (GDAP2-005) 117870184-117887733 processed_transcript
ENST00000493555 (GDAP2-004) 117896616-117920207 processed_transcript
ENST00000494224 (GDAP2-003) 117912530-117929560 processed_transcript
ENSG00000213262 (AL365331.2)
 ENST00000430995 (AL365331.2-001) 117640812-117641639 processed_pseudogene
ENSG00000228217 (AL390877.1)
 ENST00000423940 (AL390877.1-001) 117778087-117778506 processed_pseudogene
ENSG00000270719 (RP11-134N8.2)
 ENST00000605704 (RP11-134N8.2-001) 117700029-117700242 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012Q_0001ENSDARG00000010437ENSDART00000032307ENSDART00000139174ENSDART00000142787ENSDARG00000021569ENSDART00000028247ENSDART00000124301ENSDART00000133321CIL_00012Q_0002ENSG00000183508ENST00000369448ENSG00000196505ENST00000369442ENST00000369443ENST00000464026ENST00000491626ENST00000493555ENST00000494224ENSG00000213262ENST00000430995ENSG00000228217ENST00000423940ENSG00000270719ENST00000605704
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012Q_0001ENSDARG00000010437ENSDART00000032307ENSDART00000139174ENSDARG00000021569ENSDART00000028247ENSDART00000133321CIL_00012Q_0002ENSG00000183508ENST00000369448ENSG00000196505ENST00000369442ENST00000369443ENST00000491626ENST00000493555ENSG00000213262ENST00000430995ENSG00000228217ENST00000423940ENSG00000270719ENST00000605704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010437 ENSDART00000032307 N/A N/A N/A 2.716±0.26 N/A N/A 4.013±1.28 14.589±2.12 N/A N/A N/A N/A N/A N/A
ENSDART00000139174 N/A N/A N/A 0.891±0.00 N/A N/A 3.251±0.00 N/A 1.175±0.00 N/A N/A N/A N/A N/A
ENSDART00000142787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000021569 ENSDART00000028247 N/A N/A N/A 4.870±0.70 N/A N/A 6.080±2.21 8.850±1.70 1.436±0.00 N/A 1.932±0.00 N/A N/A N/A
ENSDART00000124301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133321 N/A N/A N/A 2.942±0.00 N/A N/A 3.915±0.00 3.761±0.00 0.474±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183508 ENST00000369448 0.871±0.00 5.892±0.00 1.862±0.00 0.109±0.10 3.493±1.41 5.818±2.11 1.391±0.35 2.700±1.60 2.231±0.01 5.169±2.86 4.603±3.45 3.665±1.89 1.785±1.05 22.821±10.67
ENSG00000196505 ENST00000369442 N/A N/A N/A 1.351±0.98 2.538±0.00 2.182±0.00 0.460±0.00 N/A 0.336±0.00 3.585±0.00 N/A 1.023±0.00 0.661±0.12 1.968±0.00
ENST00000369443 1.374±0.00 0.209±0.00 3.625±0.00 0.820±0.74 1.556±0.70 3.589±0.00 0.583±0.00 1.589±1.13 6.716±0.00 4.644±0.00 0.581±0.34 1.362±1.29 0.488±0.12 0.871±0.24
ENST00000464026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491626 N/A N/A N/A N/A N/A 1.860±0.00 N/A 2.901±0.00 N/A N/A 0.659±0.00 2.239±0.00 2.211±0.61 5.761±1.14
ENST00000493555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.826±0.00 1.808±0.95 5.891±1.62
ENST00000494224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213262 ENST00000430995 N/A 0.044±0.00 1.058±0.00 N/A 0.196±0.17 0.139±0.00 0.013±0.00 0.332±0.28 N/A 0.141±0.00 N/A 0.096±0.10 N/A 0.087±0.06
ENSG00000228217 ENST00000423940 N/A N/A 0.151±0.00 N/A 0.351±0.00 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270719 ENST00000605704 N/A N/A 0.652±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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