C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000130_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163810-ENSG00000163812 CGP 9606 3:44874608-44976185
GeneTranscriptPositionBiotype
ENSG00000075914 (EXOSC7)
exosome component 7 		ENST00000265564 (EXOSC7-001) 44976230-45011470 protein_coding
ENST00000459856 (EXOSC7-010) 45011233-45012668 processed_transcript
ENST00000461361 (EXOSC7-002) 44975241-45012666 processed_transcript
ENST00000467846 (EXOSC7-003) 44976251-45002239 retained_intron
ENST00000468667 (EXOSC7-008) 44976251-45012253 processed_transcript
ENST00000477865 (EXOSC7-007) 44975357-44989242 processed_transcript
ENST00000481405 (EXOSC7-009) 44976276-45036066 processed_transcript
ENST00000482004 (EXOSC7-012) 44975468-45005375 processed_transcript
ENST00000486727 (EXOSC7-004) 45004160-45011470 retained_intron
ENST00000491476 (EXOSC7-005) 44976264-45012633 processed_transcript
ENST00000498168 (EXOSC7-006) 44977092-44989242 processed_transcript
ENSG00000163810 (TGM4)
transglutaminase 4 		ENST00000296125 (TGM4-001) 44874611-44914990 protein_coding
ENST00000422219 (TGM4-003) 44874635-44901570 nonsense_mediated_decay
ENST00000459830 (TGM4-008) 44903535-44907202 retained_intron
ENST00000471637 (TGM4-009) 44874623-44876490 processed_transcript
ENST00000490928 (TGM4-004) 44874608-44889170 retained_intron
ENST00000495844 (TGM4-007) 44890339-44896739 retained_intron
ENSG00000163812 (ZDHHC3)
zinc finger, DHHC-type containing 3 		ENST00000296127 (ZDHHC3-001) 44924846-44976182 protein_coding
ENST00000339420 (ZDHHC3-003) 44915257-44945196 protein_coding
ENST00000342790 (ZDHHC3-005) 44926613-44976166 protein_coding
ENST00000419642 (ZDHHC3-010) 44933188-44959432 nonsense_mediated_decay
ENST00000424952 (ZDHHC3-002) 44925171-44976177 protein_coding
ENST00000433512 (ZDHHC3-007) 44929306-44945329 protein_coding
ENST00000443879 (ZDHHC3-009) 44919978-44929352 protein_coding
ENST00000455235 (ZDHHC3-004) 44933138-44976185 protein_coding
ENST00000466084 (ZDHHC3-006) 44917409-44919338 processed_transcript
ENST00000478669 (ZDHHC3-011) 44945168-44969931 processed_transcript
ENST00000479314 (ZDHHC3-008) 44926523-44933449 retained_intron
ENSG00000227123 (RPL12P44)
ribosomal protein L12 pseudogene 44 		ENST00000442319 (RPL12P44-001) 44937673-44938482 processed_pseudogene
ENSG00000235845 (RP11-272D20.2)
 ENST00000427258 (RP11-272D20.2-001) 44899178-44900925 antisense
CIL_000130_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025787-ENSMUSG00000025786 CGP 10090 9:123034739-123113205
GeneTranscriptPositionBiotype
ENSMUSG00000025786 (Zdhhc3)
zinc finger, DHHC domain containing 3 		ENSMUST00000026892 (Zdhhc3-008) 123076832-123113180 nonsense_mediated_decay
ENSMUST00000123937 (Zdhhc3-011) 123089033-123113178 nonsense_mediated_decay
ENSMUST00000129151 (Zdhhc3-002) 123082848-123113204 retained_intron
ENSMUST00000129862 (Zdhhc3-010) 123078300-123100349 nonsense_mediated_decay
ENSMUST00000130717 (Zdhhc3-007) 123100320-123112832 protein_coding
ENSMUST00000138622 (Zdhhc3-004) 123078040-123113178 nonsense_mediated_decay
ENSMUST00000140497 (Zdhhc3-001) 123066160-123113147 nonsense_mediated_decay
ENSMUST00000147563 (Zdhhc3-003) 123074146-123113205 protein_coding
ENSMUST00000150679 (Zdhhc3-006) 123084296-123113124 nonsense_mediated_decay
ENSMUST00000152396 (Zdhhc3-009) 123080358-123113121 nonsense_mediated_decay
ENSMUST00000155778 (Zdhhc3-005) 123077500-123113166 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000130_0001ENSG00000075914ENST00000265564ENST00000467846ENST00000482004ENST00000486727ENST00000491476ENSG00000163810ENST00000296125ENST00000459830ENSG00000163812ENST00000296127ENST00000339420ENST00000342790ENST00000419642ENST00000424952ENST00000479314ENSG00000227123ENST00000442319ENSG00000235845ENST00000427258CIL_000130_0002ENSMUSG00000025786ENSMUST00000026892ENSMUST00000123937ENSMUST00000129151ENSMUST00000140497ENSMUST00000147563ENSMUST00000155778
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075914 ENST00000265564 12.038±0.00 14.214±0.00 N/A 5.162±2.29 N/A 4.561±1.91 6.620±4.94 16.860±0.00 6.699±0.00 9.407±4.23 7.606±4.81 15.411±3.89 14.439±0.00 23.499±2.35
ENST00000459856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467846 N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A
ENST00000468667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482004 N/A N/A N/A N/A 3.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486727 N/A N/A N/A 1.513±0.00 N/A 1.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491476 N/A 5.477±0.00 N/A 1.429±0.00 N/A 4.105±0.00 0.711±0.00 N/A 2.576±0.00 N/A 2.165±0.33 5.108±1.53 N/A N/A
ENST00000498168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163810 ENST00000296125 N/A N/A 0.129±0.00 0.023±0.00 0.005±0.00 N/A N/A 0.027±0.00 0.126±0.00 0.009±0.00 0.176±0.00 0.016±0.01 0.028±0.00 N/A
ENST00000422219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459830 N/A N/A 0.123±0.00 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163812 ENST00000296127 N/A N/A N/A N/A N/A 2.178±0.00 N/A N/A N/A N/A N/A 3.493±0.00 N/A N/A
ENST00000339420 3.198±0.00 N/A N/A 2.363±1.29 6.239±0.00 N/A N/A 5.586±0.00 1.598±0.78 6.720±0.00 2.418±0.00 3.982±1.85 6.048±1.22 18.888±0.00
ENST00000342790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.519±0.00 23.395±0.00 65.288±0.00
ENST00000419642 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.635±0.00 N/A N/A N/A N/A
ENST00000424952 18.655±0.00 13.682±0.00 1.674±0.00 5.774±2.93 18.235±11.20 10.104±2.46 8.916±7.56 10.172±6.45 4.937±1.71 6.507±2.00 5.860±3.82 11.160±4.17 16.783±1.10 17.745±3.40
ENST00000433512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479314 N/A N/A 4.300±0.00 N/A N/A N/A N/A 3.047±0.00 N/A N/A N/A N/A N/A 58.351±0.00
ENSG00000227123 ENST00000442319 0.064±0.00 N/A N/A 0.143±0.00 0.262±0.12 N/A 0.093±0.00 0.205±0.00 0.091±0.00 0.130±0.00 0.059±0.00 0.363±0.31 N/A 0.090±0.00
ENSG00000235845 ENST00000427258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A 0.173±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025786 ENSMUST00000026892 11.259±3.02 11.965±2.31 14.312±0.16 10.904±0.83 12.941±1.97 16.578±3.81 4.952±1.02 9.781±0.94 6.312±2.21 37.749±5.24 8.930±0.38 12.498±3.43 7.886±2.54 2.359±1.02
ENSMUST00000123937 39.187±19.03 116.978±23.62 N/A N/A 91.194±20.13 95.535±38.83 17.921±3.27 42.187±14.32 14.496±2.50 131.706±65.67 N/A 111.880±10.87 N/A 6.807±0.85
ENSMUST00000129151 N/A 13.014±0.00 N/A N/A 14.813±0.00 N/A N/A N/A N/A N/A N/A 16.639±5.49 N/A N/A
ENSMUST00000129862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140497 5.941±2.01 9.664±1.34 6.356±0.02 1.949±0.15 7.369±1.15 6.495±1.30 4.011±1.45 4.974±0.43 2.619±0.44 13.537±2.29 3.882±1.76 7.871±2.09 4.605±2.19 0.735±0.28
ENSMUST00000147563 3.408±0.59 N/A 3.790±0.21 3.457±0.16 4.024±0.00 4.639±0.11 N/A 2.363±0.00 1.822±0.57 8.076±0.26 4.946±0.46 2.728±0.61 2.221±0.29 0.899±0.34
ENSMUST00000150679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155778 N/A N/A N/A 6.144±0.83 N/A N/A N/A N/A N/A N/A N/A 4.199±0.00 7.306±0.80 0.638±0.00

Loading