C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000134_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101182-ENSG00000184402 CGP 9606 20:62136735-62182484
GeneTranscriptPositionBiotype
ENSG00000184402 (SS18L1)
synovial sarcoma translocation gene on chromosome 18-like 1 		ENST00000331758 (SS18L1-003) 62143795-62182484 protein_coding
ENST00000370848 (SS18L1-201) 62161418-62180280 protein_coding
ENST00000450482 (SS18L1-004) 62143795-62161580 protein_coding
ENST00000491916 (SS18L1-002) 62162548-62163529 processed_transcript
ENST00000492466 (SS18L1-001) 62163458-62180284 nonsense_mediated_decay
CIL_000134_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027566-ENSMUSG00000039086 CGP 10090 2:180036373-180070201
GeneTranscriptPositionBiotype
ENSMUSG00000027566 (Psma7)
proteasome (prosome, macropain) subunit, alpha type 7 		ENSMUST00000029082 (Psma7-001) 180036374-180042433 protein_coding
ENSMUST00000126021 (Psma7-002) 180036374-180042395 retained_intron
ENSMUST00000129529 (Psma7-007) 180036373-180037384 retained_intron
ENSMUST00000132431 (Psma7-004) 180038069-180040145 retained_intron
ENSMUST00000135650 (Psma7-006) 180036819-180037488 retained_intron
ENSMUST00000142042 (Psma7-005) 180037634-180038821 retained_intron
ENSMUST00000155898 (Psma7-003) 180039296-180042385 processed_transcript
ENSMUSG00000039086 (Ss18l1)
synovial sarcoma translocation gene on chromosome 18-like 1 		ENSMUST00000041126 (Ss18l1-001) 180042509-180070201 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000134_0001ENSG00000184402ENST00000331758ENST00000370848ENST00000450482ENST00000491916ENST00000492466CIL_000134_0002ENSMUSG00000027566ENSMUST00000029082ENSMUST00000126021ENSMUST00000129529ENSMUST00000132431ENSMUST00000135650ENSMUST00000142042ENSMUST00000155898ENSMUSG00000039086ENSMUST00000041126
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000134_0001ENSG00000184402ENST00000331758ENST00000370848ENST00000492466CIL_000134_0002ENSMUSG00000027566ENSMUST00000029082ENSMUST00000126021ENSMUST00000132431ENSMUSG00000039086ENSMUST00000041126
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184402 ENST00000331758 0.910±0.00 0.790±0.00 N/A 3.333±1.42 1.176±0.79 0.817±0.16 0.868±0.79 N/A 1.156±0.26 0.702±0.00 1.020±0.00 2.433±0.45 0.640±0.30 1.528±1.07
ENST00000370848 N/A N/A N/A 1.412±0.00 N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000450482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492466 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.323±0.00 3.109±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027566 ENSMUST00000029082 87.193±7.00 78.159±23.90 97.715±12.97 56.457±22.24 82.288±21.60 89.984±4.64 64.499±10.96 95.854±4.94 119.140±25.67 63.569±5.34 70.497±2.65 145.130±21.06 161.640±49.72 22.950±1.18
ENSMUST00000126021 N/A 9.156±2.51 N/A N/A 9.374±1.02 5.640±0.06 N/A N/A N/A 6.013±0.40 N/A 8.933±2.04 N/A N/A
ENSMUST00000129529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132431 N/A 12.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.809±0.00
ENSMUST00000135650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039086 ENSMUST00000041126 3.752±0.51 9.896±1.25 2.643±0.02 18.827±8.84 3.641±2.05 4.393±1.19 1.460±0.43 3.557±0.37 1.665±0.66 4.347±0.42 0.630±0.22 6.935±3.89 1.202±0.40 1.652±0.71

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