C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00013J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163798-ENSG00000243147 CGP 9606 2:27663471-27988087
GeneTranscriptPositionBiotype
ENSG00000119760 (SUPT7L)
suppressor of Ty 7 (S. cerevisiae)-like 		ENST00000337768 (SUPT7L-001) 27650812-27663809 protein_coding
ENST00000404798 (SUPT7L-201) 27650812-27663840 protein_coding
ENST00000405491 (SUPT7L-003) 27653063-27663639 protein_coding
ENST00000406540 (SUPT7L-002) 27653052-27663640 protein_coding
ENST00000464789 (SUPT7L-005) 27653070-27663639 protein_coding
ENSG00000163798 (SLC4A1AP)
solute carrier family 4 (anion exchanger), member 1, adaptor protein 		ENST00000326019 (SLC4A1AP-001) 27663471-27694969 protein_coding
ENST00000427424 (SLC4A1AP-003) 27664467-27675692 nonsense_mediated_decay
ENST00000492196 (SLC4A1AP-002) 27691558-27694973 retained_intron
ENST00000613058 (SLC4A1AP-201) 27663471-27694976 protein_coding
ENST00000613517 (SLC4A1AP-004) 27663915-27677297 protein_coding
ENST00000618046 (SLC4A1AP-005) 27663889-27694972 protein_coding
ENSG00000171174 (RBKS)
ribokinase 		ENST00000302188 (RBKS-001) 27781364-27891098 protein_coding
ENST00000449378 (RBKS-002) 27781573-27890366 nonsense_mediated_decay
ENST00000453412 (RBKS-003) 27858501-27890681 nonsense_mediated_decay
ENST00000458185 (RBKS-004) 27809687-27843161 protein_coding
ENST00000612015 (RBKS-201) 27781523-27781916 protein_coding
ENSG00000205334 (LINC01460)
long intergenic non-protein coding RNA 1460 		ENST00000379677 (LINC01460-001) 27705786-27715732 lincRNA
ENSG00000243147 (MRPL33)
mitochondrial ribosomal protein L33 		ENST00000296102 (MRPL33-001) 27771717-27779741 protein_coding
ENST00000379666 (MRPL33-002) 27771717-27779734 protein_coding
ENST00000448427 (MRPL33-006) 27771739-27988087 nonsense_mediated_decay
ENST00000472192 (MRPL33-003) 27771744-27772855 retained_intron
ENST00000476552 (MRPL33-005) 27772190-27779697 processed_transcript
ENST00000483992 (MRPL33-004) 27771975-27779731 processed_transcript
ENSG00000270846 (RP11-674I16.1)
 ENST00000603006 (RP11-674I16.1-001) 27896116-27897195 processed_pseudogene
CIL_00013J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029141-ENSMUSG00000029142 CGP 10090 5:31526995-31701972
GeneTranscriptPositionBiotype
ENSMUSG00000029136 (Rbks)
ribokinase 		ENSMUST00000031018 (Rbks-001) 31624439-31697627 protein_coding
ENSMUST00000123679 (Rbks-002) 31624439-31640538 processed_transcript
ENSMUST00000128047 (Rbks-003) 31660045-31686093 processed_transcript
ENSMUSG00000029141 (Slc4a1ap)
solute carrier family 4 (anion exchanger), member 1, adaptor protein 		ENSMUST00000114533 (Slc4a1ap-001) 31526997-31554040 protein_coding
ENSMUST00000117262 (Slc4a1ap-002) 31527012-31554042 protein_coding
ENSMUST00000117319 (Slc4a1ap-003) 31527012-31536822 protein_coding
ENSMUST00000127416 (Slc4a1ap-004) 31526997-31534449 retained_intron
ENSMUST00000131584 (Slc4a1ap-008) 31527601-31532228 retained_intron
ENSMUST00000138086 (Slc4a1ap-006) 31543594-31554038 retained_intron
ENSMUST00000146720 (Slc4a1ap-005) 31526995-31529405 retained_intron
ENSMUST00000149198 (Slc4a1ap-009) 31531973-31534990 retained_intron
ENSMUSG00000029142 (Mrpl33)
mitochondrial ribosomal protein L33 		ENSMUST00000031024 (Mrpl33-001) 31613939-31622644 protein_coding
ENSMUST00000128529 (Mrpl33-009) 31613956-31641792 processed_transcript
ENSMUST00000133516 (Mrpl33-011) 31654625-31658130 processed_transcript
ENSMUST00000137652 (Mrpl33-008) 31598733-31622644 processed_transcript
ENSMUST00000138996 (Mrpl33-010) 31613972-31701952 processed_transcript
ENSMUST00000142345 (Mrpl33-006) 31596935-31654861 processed_transcript
ENSMUST00000142394 (Mrpl33-007) 31596938-31701972 processed_transcript
ENSMUST00000145264 (Mrpl33-003) 31613972-31654861 processed_transcript
ENSMUST00000152261 (Mrpl33-004) 31613985-31664384 nonsense_mediated_decay
ENSMUST00000154286 (Mrpl33-005) 31655496-31663431 processed_transcript
ENSMUST00000155497 (Mrpl33-002) 31614013-31622642 retained_intron
ENSMUSG00000053134 (Supt7l)
suppressor of Ty 7-like 		ENSMUST00000065388 (Supt7l-001) 31514569-31526773 protein_coding
ENSMUST00000117642 (Supt7l-002) 31514570-31526736 protein_coding
ENSMUST00000118874 (Supt7l-003) 31516499-31526731 protein_coding
ENSMUST00000120574 (Supt7l-005) 31515322-31525268 protein_coding
ENSMUST00000123329 (Supt7l-004) 31522033-31527807 retained_intron
ENSMUSG00000099301 (Mir3473e)
microRNA 3473e 		ENSMUST00000183932 (Mir3473e-201) 31667231-31667340 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00013J_0001ENSG00000119760ENST00000337768ENST00000404798ENST00000405491ENST00000406540ENST00000464789ENSG00000163798ENST00000326019ENST00000427424ENST00000492196ENST00000613058ENST00000613517ENST00000618046ENSG00000171174ENST00000302188ENST00000449378ENST00000453412ENST00000458185ENST00000612015ENSG00000205334ENST00000379677ENSG00000243147ENST00000296102ENST00000379666ENST00000448427ENST00000472192ENST00000476552ENST00000483992ENSG00000270846ENST00000603006CIL_00013J_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00013J_0001ENSG00000119760ENST00000337768ENST00000405491ENST00000406540ENST00000464789ENSG00000163798ENST00000326019ENST00000618046ENSG00000171174ENST00000302188ENSG00000205334ENST00000379677ENSG00000243147ENST00000296102ENST00000379666ENSG00000270846ENST00000603006CIL_00013J_0002ENSMUSG00000029136ENSMUST00000031018ENSMUST00000123679ENSMUSG00000029141ENSMUST00000114533ENSMUST00000117262ENSMUST00000127416ENSMUST00000131584ENSMUST00000149198ENSMUSG00000029142ENSMUST00000031024ENSMUST00000137652ENSMUST00000155497ENSMUSG00000053134ENSMUST00000065388ENSMUST00000117642ENSMUST00000120574ENSMUST00000123329ENSMUSG00000099301ENSMUST00000183932
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119760 ENST00000337768 N/A 3.586±0.00 2.910±0.00 5.762±0.38 3.869±0.00 N/A 2.489±0.27 3.640±0.60 3.291±1.87 3.135±1.04 2.179±0.51 5.204±1.48 3.539±0.06 N/A
ENST00000404798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405491 N/A N/A N/A 11.509±2.67 N/A N/A 5.338±0.00 9.596±0.00 4.736±0.00 5.062±0.00 4.040±0.00 N/A 7.618±0.34 N/A
ENST00000406540 N/A 5.799±0.00 4.304±0.00 N/A N/A 11.337±0.00 3.224±0.00 N/A N/A 5.894±0.00 2.338±0.00 4.863±0.00 N/A N/A
ENST00000464789 N/A N/A N/A N/A 8.155±0.00 N/A N/A 4.905±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000163798 ENST00000326019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.959±0.00
ENST00000427424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618046 7.682±0.00 8.123±0.00 N/A 12.734±5.91 6.634±1.18 6.811±0.00 4.128±2.14 7.558±3.84 3.933±0.00 4.520±0.09 7.714±0.00 10.959±5.58 11.107±5.14 42.617±1.04
ENSG00000171174 ENST00000302188 N/A N/A 1.824±0.00 N/A N/A N/A N/A 5.974±2.96 13.227±0.00 11.332±0.00 N/A N/A N/A 7.441±0.00
ENST00000449378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205334 ENST00000379677 0.033±0.00 0.083±0.00 0.093±0.00 0.065±0.00 0.018±0.00 0.088±0.00 0.055±0.00 0.009±0.00 0.028±0.00 0.070±0.00 N/A 0.068±0.04 0.030±0.01 0.070±0.01
ENSG00000243147 ENST00000296102 14.881±0.00 26.156±0.00 5.971±0.00 12.887±4.02 22.396±0.00 18.269±12.92 33.900±26.26 27.796±19.38 26.046±0.00 56.493±0.00 30.180±13.10 33.747±16.47 31.463±2.80 32.326±2.81
ENST00000379666 N/A N/A N/A 22.382±4.23 13.648±0.00 29.939±0.00 65.482±50.03 N/A 4.927±0.00 54.158±0.00 12.882±0.00 63.816±11.03 43.592±8.30 41.746±4.72
ENST00000448427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270846 ENST00000603006 N/A N/A N/A 0.089±0.00 0.030±0.00 N/A 0.039±0.00 0.150±0.09 0.105±0.07 N/A N/A 0.129±0.10 0.042±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029136 ENSMUST00000031018 2.385±0.65 3.693±0.85 1.752±0.27 0.824±0.54 1.877±0.80 5.820±0.40 1.088±0.36 9.074±0.59 8.912±1.80 2.566±0.30 1.151±0.25 1.750±0.61 4.499±1.51 8.873±3.06
ENSMUST00000123679 N/A N/A N/A 0.255±0.00 0.923±0.00 N/A 0.178±0.00 N/A N/A 0.572±0.00 0.570±0.00 0.985±0.47 N/A N/A
ENSMUST00000128047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029141 ENSMUST00000114533 N/A N/A 2.890±0.33 8.318±6.06 N/A 2.443±0.00 2.402±0.00 3.340±0.00 3.693±0.61 N/A 2.552±0.52 6.258±2.88 9.425±7.82 14.224±0.00
ENSMUST00000117262 1.751±0.00 N/A 2.946±0.32 7.799±4.46 2.555±0.00 N/A 1.352±0.01 N/A 2.587±0.88 N/A 2.019±0.27 6.780±4.63 7.265±4.47 6.596±7.41
ENSMUST00000117319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127416 3.322±0.00 11.559±2.23 N/A N/A 10.053±1.10 6.828±0.70 N/A 5.311±0.16 2.955±1.22 8.133±1.65 N/A 9.296±1.66 N/A 3.115±0.83
ENSMUST00000131584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.533±0.00
ENSMUST00000138086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.922±0.00 N/A N/A
ENSMUSG00000029142 ENSMUST00000031024 N/A N/A 89.458±21.72 31.779±6.17 N/A N/A 35.355±3.83 N/A 74.927±17.45 N/A 95.388±8.82 78.582±11.87 35.698±11.64 50.989±0.00
ENSMUST00000128529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137652 N/A N/A N/A 70.036±0.00 N/A N/A N/A N/A N/A N/A N/A 143.248±0.36 64.748±22.40 149.375±0.00
ENSMUST00000138996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155497 6.871±0.46 23.558±2.95 6.951±2.34 3.313±0.12 6.508±0.29 3.180±0.35 2.709±0.04 N/A 2.946±0.61 6.587±1.05 N/A 7.078±1.97 2.196±0.61 N/A
ENSMUSG00000053134 ENSMUST00000065388 6.959±0.96 5.440±1.29 6.089±0.22 6.050±1.19 5.704±1.65 5.510±1.31 4.487±0.73 9.281±1.13 4.534±0.86 7.248±0.57 2.898±0.19 6.844±1.56 5.279±0.92 3.136±0.40
ENSMUST00000117642 1.272±0.00 2.873±0.00 N/A N/A N/A N/A 0.844±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000120574 N/A N/A N/A N/A N/A 2.970±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123329 N/A 5.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.139±0.00 N/A N/A
ENSMUSG00000099301 ENSMUST00000183932 2417.160±0.00 N/A N/A N/A N/A N/A 1639.395±123.27 N/A N/A 1180.758±216.18 N/A N/A 10.282±0.00 1585.550±0.00

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