C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000147_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155158-ENSG00000164975 CGP 9606 9:15163622-15465953
GeneTranscriptPositionBiotype
ENSG00000155158 (TTC39B)
tetratricopeptide repeat domain 39B 		ENST00000297615 (TTC39B-201) 15170845-15307360 protein_coding
ENST00000380850 (TTC39B-202) 15170845-15307360 protein_coding
ENST00000380853 (TTC39B-003) 15171564-15188065 retained_intron
ENST00000505732 (TTC39B-006) 15186587-15307360 retained_intron
ENST00000506891 (TTC39B-004) 15249042-15307209 protein_coding
ENST00000507285 (TTC39B-007) 15171929-15232444 protein_coding
ENST00000507993 (TTC39B-005) 15171946-15250116 protein_coding
ENST00000512701 (TTC39B-001) 15163622-15307360 protein_coding
ENST00000582994 (TTC39B-010) 15214138-15232444 processed_transcript
ENSG00000164985 (PSIP1)
PC4 and SFRS1 interacting protein 1 		ENST00000380715 (PSIP1-006) 15470636-15510991 protein_coding
ENST00000380716 (PSIP1-007) 15470636-15510994 protein_coding
ENST00000380733 (PSIP1-003) 15464066-15511019 protein_coding
ENST00000380738 (PSIP1-004) 15464066-15510995 protein_coding
ENST00000397519 (PSIP1-201) 15470646-15510289 protein_coding
ENST00000463712 (PSIP1-010) 15489270-15510946 processed_transcript
ENST00000481862 (PSIP1-005) 15470990-15472750 protein_coding
ENST00000484265 (PSIP1-008) 15504959-15510989 processed_transcript
ENST00000487363 (PSIP1-009) 15485903-15510289 processed_transcript
ENST00000488797 (PSIP1-001) 15491952-15510991 processed_transcript
ENST00000495873 (PSIP1-002) 15472081-15474201 processed_transcript
ENSG00000215236 (RPL7P33)
ribosomal protein L7 pseudogene 33 		ENST00000444159 (RPL7P33-001) 15361393-15362134 processed_pseudogene
CIL_000147_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038172-ENSMUSG00000028483 CGP 10090 4:83220300-83467676
GeneTranscriptPositionBiotype
ENSMUSG00000028483 (Snapc3)
small nuclear RNA activating complex, polypeptide 3 		ENSMUST00000030206 (Snapc3-006) 83417724-83453340 protein_coding
ENSMUST00000071544 (Snapc3-003) 83417731-83442086 protein_coding
ENSMUST00000123262 (Snapc3-005) 83417724-83461846 nonsense_mediated_decay
ENSMUST00000124856 (Snapc3-004) 83417744-83467219 nonsense_mediated_decay
ENSMUST00000130676 (Snapc3-007) 83463976-83467211 retained_intron
ENSMUST00000137512 (Snapc3-002) 83417744-83454033 nonsense_mediated_decay
ENSMUST00000143533 (Snapc3-001) 83417749-83467676 nonsense_mediated_decay
ENSMUST00000159518 (Snapc3-009) 83453806-83467166 processed_transcript
ENSMUST00000160742 (Snapc3-008) 83453954-83466127 processed_transcript
ENSMUSG00000028484 (Psip1)
PC4 and SFRS1 interacting protein 1 		ENSMUST00000030207 (Psip1-001) 83455680-83486459 protein_coding
ENSMUST00000107214 (Psip1-003) 83461871-83486453 protein_coding
ENSMUST00000107215 (Psip1-002) 83461871-83486458 protein_coding
ENSMUST00000126706 (Psip1-004) 83461871-83464964 protein_coding
ENSMUST00000130626 (Psip1-006) 83476298-83486178 protein_coding
ENSMUST00000144349 (Psip1-005) 83462830-83465043 retained_intron
ENSMUST00000152382 (Psip1-008) 83458075-83460292 retained_intron
ENSMUSG00000086321 (Gm11413)
predicted gene 11413 		ENSMUST00000155822 (Gm11413-001) 83378317-83390668 antisense
ENSMUSG00000087592 (Gm11184)
predicted gene 11184 		ENSMUST00000126437 (Gm11184-001) 83383064-83392205 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000147_0001ENSG00000155158ENST00000297615ENST00000380850ENST00000380853ENST00000505732ENST00000506891ENST00000507285ENST00000507993ENST00000512701ENST00000582994ENSG00000164985ENST00000380715ENST00000380716ENST00000380733ENST00000380738ENST00000397519ENST00000463712ENST00000481862ENST00000484265ENST00000487363ENST00000488797ENST00000495873ENSG00000215236ENST00000444159CIL_000147_0002ENSMUSG00000028483ENSMUST00000030206ENSMUST00000071544ENSMUST00000123262ENSMUST00000124856ENSMUST00000130676ENSMUST00000137512ENSMUST00000143533ENSMUST00000159518ENSMUST00000160742ENSMUSG00000028484ENSMUST00000030207ENSMUST00000107214ENSMUST00000107215ENSMUST00000126706ENSMUST00000130626ENSMUST00000144349ENSMUST00000152382ENSMUSG00000086321ENSMUST00000155822ENSMUSG00000087592ENSMUST00000126437
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000147_0001ENSG00000155158ENST00000297615ENST00000380850ENST00000380853ENST00000505732ENST00000507993ENST00000512701ENSG00000164985ENST00000380715ENST00000380733ENST00000380738ENST00000397519ENST00000495873ENSG00000215236ENST00000444159CIL_000147_0002ENSMUSG00000028483ENSMUST00000030206ENSMUST00000071544ENSMUST00000143533ENSMUSG00000028484ENSMUST00000030207ENSMUST00000107214ENSMUST00000107215ENSMUST00000130626ENSMUST00000152382ENSMUSG00000086321ENSMUST00000155822ENSMUSG00000087592ENSMUST00000126437
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155158 ENST00000297615 N/A N/A N/A N/A 1.929±0.00 N/A N/A 0.550±0.00 N/A 2.698±0.00 0.438±0.00 N/A 0.369±0.00 N/A
ENST00000380850 N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000380853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.803±0.00 3.602±0.00
ENST00000505732 N/A N/A N/A N/A 2.792±0.00 2.551±0.00 N/A N/A 2.046±0.00 N/A N/A N/A N/A N/A
ENST00000506891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A 3.040±1.16
ENST00000512701 0.953±0.00 0.988±0.00 2.494±0.00 0.548±0.00 N/A 1.125±0.00 0.284±0.00 2.592±0.00 0.485±0.00 1.950±0.09 1.324±0.00 1.871±1.09 0.277±0.21 0.822±0.36
ENST00000582994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164985 ENST00000380715 N/A N/A 1.927±0.00 9.498±0.00 N/A N/A N/A N/A N/A 2.503±0.00 N/A N/A N/A N/A
ENST00000380716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380733 3.134±0.00 N/A N/A 4.251±0.00 5.914±2.78 N/A 3.394±2.40 6.158±5.08 5.161±0.00 6.265±0.00 0.596±0.00 7.907±3.74 5.305±0.00 27.348±0.00
ENST00000380738 8.525±0.00 22.634±0.00 2.332±0.00 23.340±0.00 N/A 17.799±13.27 N/A N/A 2.332±0.00 4.647±1.65 6.192±0.00 14.314±8.83 12.770±7.29 38.832±0.00
ENST00000397519 N/A N/A N/A 28.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.917±0.00
ENST00000463712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495873 N/A N/A N/A 12.866±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215236 ENST00000444159 0.063±0.00 0.164±0.00 N/A 0.064±0.00 0.080±0.00 0.134±0.00 0.043±0.00 0.048±0.00 0.014±0.00 0.030±0.00 0.141±0.00 0.091±0.07 N/A 0.220±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028483 ENSMUST00000030206 7.687±1.28 N/A N/A N/A 6.991±0.79 N/A 6.939±1.27 3.643±0.29 2.746±0.33 7.304±1.91 3.140±0.61 N/A N/A N/A
ENSMUST00000071544 N/A 25.659±4.15 N/A N/A 23.135±0.00 11.428±1.98 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143533 N/A N/A N/A N/A 3.337±0.07 N/A N/A 1.997±0.00 N/A 3.644±0.00 N/A N/A N/A N/A
ENSMUST00000159518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028484 ENSMUST00000030207 5.392±1.63 N/A 13.334±0.67 36.151±3.67 3.647±0.53 N/A 2.783±0.68 2.494±0.30 14.940±10.38 5.618±0.69 3.282±0.78 26.113±6.78 30.574±20.44 57.371±50.54
ENSMUST00000107214 12.949±0.00 35.046±20.16 N/A 41.348±1.02 32.073±0.00 20.516±9.63 3.279±0.68 N/A 8.370±4.24 7.888±2.09 1.605±0.44 99.370±32.70 12.359±0.00 N/A
ENSMUST00000107215 10.416±0.00 67.738±24.73 N/A 37.976±8.71 42.709±16.27 17.849±5.17 N/A 9.638±8.55 6.566±4.25 10.101±2.99 N/A 64.188±35.55 25.339±14.55 30.298±2.02
ENSMUST00000126706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130626 28.289±0.00 N/A N/A N/A 20.415±0.00 N/A N/A 6.043±0.00 N/A 7.767±0.00 N/A 56.139±22.51 N/A 37.086±0.00
ENSMUST00000144349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 78.620±0.00 61.449±0.00 523.090±0.00
ENSMUSG00000086321 ENSMUST00000155822 N/A N/A 0.013±0.01 0.059±0.02 0.059±0.00 0.372±0.00 N/A N/A 0.022±0.02 0.100±0.00 N/A 0.151±0.03 0.017±0.01 0.056±0.04
ENSMUSG00000087592 ENSMUST00000126437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.809±1.91

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