C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00014Z_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000160293-ENSG00000169925 | CGP | 9606 | 9:133761894-134068535  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000160293  (VAV2)vav 2 guanine nucleotide exchange factor |
ENST00000371850 (VAV2-001)
|
133761894-133992310 | protein_coding | |
|
ENST00000371851 (VAV2-002)
|
133761894-133992604 | protein_coding | ||
|
ENST00000406606 (VAV2-003)
|
133761894-133992281 | protein_coding | ||
|
ENST00000472905 (VAV2-005)
|
133925851-133939301 | processed_transcript | ||
|
ENST00000486113 (VAV2-004)
|
133861212-133992259 | processed_transcript | ||
|
ENSG00000169925 (BRD3) bromodomain containing 3 |
ENST00000303407 (BRD3-001)
|
134030305-134068017 | protein_coding | |
|
ENST00000371834 (BRD3-002)
|
134036028-134068535 | protein_coding | ||
|
ENST00000371842 (BRD3-004)
|
134052433-134056012 | protein_coding | ||
|
ENST00000433041 (BRD3-005)
|
134053418-134054140 | protein_coding | ||
|
ENST00000473349 (BRD3-003)
|
134033402-134041794 | processed_transcript | ||
|
ENST00000494743 (BRD3-006)
|
134048002-134050427 | retained_intron | ||
|
ENSG00000235106 (LINC00094) long intergenic non-protein coding RNA 94 |
ENST00000430633 (LINC00094-001)
|
134025439-134028102 | antisense | |
|
ENST00000432807 (LINC00094-002)
|
134025495-134028102 | antisense | ||
|
ENST00000550853 (LINC00094-004)
|
134025486-134029254 | antisense | ||
|
ENST00000552018 (LINC00094-003)
|
134027151-134029515 | antisense | ||
|
ENST00000599836 (LINC00094-201)
|
134028771-134030459 | antisense | ||
|
ENST00000603928 (LINC00094-005)
|
134026407-134031585 | antisense | ||
|
ENST00000605164 (LINC00094-006)
|
134029039-134034666 | antisense | ||
|
ENST00000624381 (LINC00094-009)
|
134027752-134031435 | antisense | ||
|
ENSG00000235138 (RP11-374P20.4) |
ENST00000412181 (RP11-374P20.4-001)
|
134054290-134058805 | antisense | |
| CIL_00014Z_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000009621-ENSMUSG00000026918 | CGP | 10090 | 2:27262104-27507662 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000009621 (Vav2) vav 2 oncogene |
ENSMUST00000056176 (Vav2-001)
|
27262104-27427033 | protein_coding | |
|
ENSMUST00000132642 (Vav2-003)
|
27302025-27344480 | processed_transcript | ||
|
ENSMUST00000135584 (Vav2-006)
|
27269581-27271875 | processed_transcript | ||
|
ENSMUST00000146843 (Vav2-007)
|
27269581-27271798 | processed_transcript | ||
|
ENSMUST00000148067 (Vav2-004)
|
27268919-27278879 | processed_transcript | ||
|
ENSMUST00000149758 (Vav2-005)
|
27268455-27277341 | processed_transcript | ||
|
ENSMUST00000185188 (Vav2-002)
|
27262104-27426912 | nonsense_mediated_decay | ||
|
ENSMUSG00000026918 (Brd3) bromodomain containing 3 |
ENSMUST00000028282 (Brd3-001)
|
27445579-27475398 | protein_coding | |
|
ENSMUST00000077737 (Brd3-002)
|
27445579-27475686 | protein_coding | ||
|
ENSMUST00000113941 (Brd3-201)
|
27445600-27475673 | protein_coding | ||
|
ENSMUST00000126059 (Brd3-007)
|
27463999-27475181 | processed_transcript | ||
|
ENSMUST00000130932 (Brd3-005)
|
27452996-27475653 | processed_transcript | ||
|
ENSMUST00000138693 (Brd3-003)
|
27449269-27475654 | protein_coding | ||
|
ENSMUST00000144758 (Brd3-008)
|
27463892-27464582 | processed_transcript | ||
|
ENSMUST00000147736 (Brd3-006)
|
27463531-27475607 | protein_coding | ||
|
ENSMUST00000154316 (Brd3-004)
|
27449269-27507662 | protein_coding | ||
|
ENSMUST00000164296 (Brd3-202)
|
27447843-27464116 | protein_coding | ||
|
ENSMUSG00000086669 (AA645442) expressed sequence AA645442 |
ENSMUST00000156020 (AA645442-001)
|
27326704-27331297 | antisense | |
Expression Patterns
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