C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000150_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169925-ENSG00000196363 CGP 9606 9:134030305-134159968
GeneTranscriptPositionBiotype
ENSG00000169925 (BRD3)
bromodomain containing 3 		ENST00000303407 (BRD3-001) 134030305-134068017 protein_coding
ENST00000371834 (BRD3-002) 134036028-134068535 protein_coding
ENST00000371842 (BRD3-004) 134052433-134056012 protein_coding
ENST00000433041 (BRD3-005) 134053418-134054140 protein_coding
ENST00000473349 (BRD3-003) 134033402-134041794 processed_transcript
ENST00000494743 (BRD3-006) 134048002-134050427 retained_intron
ENSG00000196363 (WDR5)
WD repeat domain 5 		ENST00000358625 (WDR5-001) 134136088-134159968 protein_coding
ENST00000608739 (WDR5-003) 134135377-134141974 protein_coding
ENST00000608937 (WDR5-002) 134135365-134140790 protein_coding
ENSG00000235106 (LINC00094)
long intergenic non-protein coding RNA 94 		ENST00000430633 (LINC00094-001) 134025439-134028102 antisense
ENST00000432807 (LINC00094-002) 134025495-134028102 antisense
ENST00000550853 (LINC00094-004) 134025486-134029254 antisense
ENST00000552018 (LINC00094-003) 134027151-134029515 antisense
ENST00000599836 (LINC00094-201) 134028771-134030459 antisense
ENST00000603928 (LINC00094-005) 134026407-134031585 antisense
ENST00000605164 (LINC00094-006) 134029039-134034666 antisense
ENST00000624381 (LINC00094-009) 134027752-134031435 antisense
ENSG00000235138 (RP11-374P20.4)
 ENST00000412181 (RP11-374P20.4-001) 134054290-134058805 antisense
ENSG00000271525 (RP11-349K21.1)
 ENST00000605447 (RP11-349K21.1-001) 134078904-134079444 processed_pseudogene
CIL_000150_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026918-ENSMUSG00000026917 CGP 10090 2:27445579-27536535
GeneTranscriptPositionBiotype
ENSMUSG00000026917 (Wdr5)
WD repeat domain 5 		ENSMUST00000113952 (Wdr5-001) 27515157-27536535 protein_coding
ENSMUST00000125088 (Wdr5-004) 27527772-27533355 processed_transcript
ENSMUST00000140396 (Wdr5-003) 27519761-27535043 protein_coding
ENSMUST00000144315 (Wdr5-002) 27515157-27520653 processed_transcript
ENSMUSG00000026918 (Brd3)
bromodomain containing 3 		ENSMUST00000028282 (Brd3-001) 27445579-27475398 protein_coding
ENSMUST00000077737 (Brd3-002) 27445579-27475686 protein_coding
ENSMUST00000113941 (Brd3-201) 27445600-27475673 protein_coding
ENSMUST00000126059 (Brd3-007) 27463999-27475181 processed_transcript
ENSMUST00000130932 (Brd3-005) 27452996-27475653 processed_transcript
ENSMUST00000138693 (Brd3-003) 27449269-27475654 protein_coding
ENSMUST00000144758 (Brd3-008) 27463892-27464582 processed_transcript
ENSMUST00000147736 (Brd3-006) 27463531-27475607 protein_coding
ENSMUST00000154316 (Brd3-004) 27449269-27507662 protein_coding
ENSMUST00000164296 (Brd3-202) 27447843-27464116 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000150_0001ENSG00000169925ENST00000303407ENST00000371834ENST00000371842ENST00000433041ENST00000473349ENST00000494743ENSG00000196363ENST00000358625ENST00000608739ENST00000608937ENSG00000235106ENST00000430633ENST00000432807ENST00000550853ENST00000552018ENST00000599836ENST00000603928ENST00000605164ENST00000624381ENSG00000235138ENST00000412181ENSG00000271525ENST00000605447CIL_000150_0002ENSMUSG00000026917ENSMUST00000113952ENSMUST00000125088ENSMUST00000140396ENSMUST00000144315ENSMUSG00000026918ENSMUST00000028282ENSMUST00000077737ENSMUST00000113941ENSMUST00000126059ENSMUST00000130932ENSMUST00000138693ENSMUST00000144758ENSMUST00000147736ENSMUST00000154316ENSMUST00000164296
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000150_0001ENSG00000169925ENST00000303407ENST00000473349ENSG00000196363ENST00000358625ENSG00000235106ENST00000430633ENST00000432807ENSG00000235138ENST00000412181ENSG00000271525ENST00000605447CIL_000150_0002ENSMUSG00000026917ENSMUST00000113952ENSMUST00000140396ENSMUST00000144315ENSMUSG00000026918ENSMUST00000028282ENSMUST00000077737ENSMUST00000113941ENSMUST00000130932ENSMUST00000138693ENSMUST00000154316ENSMUST00000164296
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169925 ENST00000303407 9.639±0.00 5.925±0.00 1.389±0.00 4.718±3.34 4.488±3.10 6.137±4.10 2.960±2.73 3.986±2.83 2.017±0.33 2.585±2.08 11.891±0.00 8.625±5.28 6.258±1.75 11.380±2.59
ENST00000371834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473349 N/A N/A 4.635±0.00 N/A 3.866±0.00 3.906±0.00 0.721±0.00 3.843±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196363 ENST00000358625 6.732±0.00 6.381±0.00 0.801±0.00 3.771±3.44 4.141±2.91 4.705±3.32 1.343±0.52 5.479±2.33 4.695±2.77 3.050±0.00 10.694±9.01 16.199±8.40 14.732±3.16 39.998±6.11
ENST00000608739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235106 ENST00000430633 6.117±0.00 7.796±0.00 1.048±0.00 9.210±5.31 6.722±0.00 5.855±0.00 1.711±1.37 9.434±0.00 1.624±0.24 4.125±2.35 N/A 11.691±1.63 3.776±0.06 12.738±2.45
ENST00000432807 N/A N/A N/A 2.814±0.00 N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235138 ENST00000412181 0.010±0.00 0.115±0.00 0.116±0.00 0.020±0.01 0.189±0.09 0.042±0.01 0.033±0.00 0.037±0.00 0.042±0.00 0.148±0.05 N/A 0.082±0.06 0.027±0.00 2.401±0.80
ENSG00000271525 ENST00000605447 N/A N/A N/A 0.022±0.00 N/A 0.020±0.00 N/A 0.043±0.00 N/A N/A 0.019±0.00 N/A N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026917 ENSMUST00000113952 13.722±5.10 8.909±0.78 13.900±2.36 14.495±8.34 9.845±0.51 9.719±0.81 8.542±0.31 14.607±0.94 16.027±6.39 12.072±0.90 8.017±1.04 16.917±2.46 18.734±7.65 11.039±1.19
ENSMUST00000125088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140396 N/A N/A N/A 4.233±0.00 N/A N/A N/A N/A N/A N/A N/A 13.049±0.00 20.050±2.95 6.583±0.00
ENSMUST00000144315 N/A 23.014±3.74 N/A N/A 10.004±0.85 5.463±1.34 N/A N/A N/A 6.596±0.00 N/A 23.630±5.13 N/A N/A
ENSMUSG00000026918 ENSMUST00000028282 N/A N/A N/A N/A N/A N/A N/A N/A 1.015±0.03 N/A N/A N/A N/A N/A
ENSMUST00000077737 9.571±3.89 23.449±3.79 13.429±0.86 18.258±8.96 7.054±1.61 11.599±1.17 4.711±0.71 7.776±0.27 7.396±0.95 11.125±1.95 3.894±0.60 19.204±3.78 18.493±6.78 N/A
ENSMUST00000113941 1.291±0.07 N/A N/A 2.740±0.00 1.332±0.00 N/A 1.257±0.00 N/A N/A 2.062±0.03 1.059±0.40 N/A N/A 7.127±2.03
ENSMUST00000126059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130932 N/A N/A N/A N/A 2.192±0.15 N/A N/A N/A N/A N/A N/A 3.648±0.46 N/A N/A
ENSMUST00000138693 N/A 11.819±1.50 N/A N/A 5.705±1.40 6.972±1.20 N/A N/A 3.151±0.67 N/A N/A N/A 5.015±0.74 53.850±0.00
ENSMUST00000144758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.885±7.64
ENSMUST00000164296 N/A N/A N/A 5.106±0.00 N/A N/A N/A N/A N/A N/A N/A 15.828±0.00 27.694±9.64 29.998±0.00

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