C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00015A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061710-ENSDARG00000076155 CGP 7955 12:25069987-25097062
GeneTranscriptPositionBiotype
ENSDARG00000061710 (map3k8)
mitogen-activated protein kinase kinase kinase 8 		ENSDART00000088319 (map3k8-001) 25069987-25081329 protein_coding
ENSDARG00000076155 (mtpap)
mitochondrial poly(A) polymerase 		ENSDART00000111334 (mtpap-001) 25086776-25097062 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00015A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024235-ENSMUSG00000024234 CGP 10090 18:4331327-4397330
GeneTranscriptPositionBiotype
ENSMUSG00000024234 (Mtpap)
mitochondrial poly(A) polymerase 		ENSMUST00000025077 (Mtpap-201) 4375592-4397330 protein_coding
ENSMUSG00000024235 (Map3k8)
mitogen-activated protein kinase kinase kinase 8 		ENSMUST00000025078 (Map3k8-002) 4331327-4352953 protein_coding
ENSMUST00000105472 (Map3k8-004) 4331341-4336295 processed_transcript
ENSMUST00000172805 (Map3k8-003) 4347455-4353015 retained_intron
ENSMUST00000173708 (Map3k8-005) 4333845-4335048 retained_intron
ENSMUST00000173930 (Map3k8-001) 4331340-4352957 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015A_0001ENSDARG00000061710ENSDART00000088319ENSDARG00000076155ENSDART00000111334CIL_00015A_0002ENSMUSG00000024234ENSMUST00000025077ENSMUSG00000024235ENSMUST00000025078ENSMUST00000105472ENSMUST00000172805ENSMUST00000173708ENSMUST00000173930
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015A_0001ENSDARG00000061710ENSDART00000088319ENSDARG00000076155ENSDART00000111334CIL_00015A_0002ENSMUSG00000024234ENSMUST00000025077ENSMUSG00000024235ENSMUST00000025078ENSMUST00000105472ENSMUST00000172805ENSMUST00000173708ENSMUST00000173930
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061710 ENSDART00000088319 N/A N/A N/A 1.090±0.52 N/A N/A 1.872±0.30 1.793±1.31 0.048±0.00 N/A 0.509±0.00 N/A N/A N/A
ENSDARG00000076155 ENSDART00000111334 N/A N/A N/A 2.041±0.47 N/A N/A 1.941±0.97 3.048±1.30 1.369±0.00 N/A 1.379±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024234 ENSMUST00000025077 4.492±0.80 3.864±0.93 7.466±0.73 5.145±3.24 3.549±1.31 2.649±0.75 2.847±0.44 3.686±0.79 4.402±1.37 3.462±0.40 3.680±0.36 5.104±1.64 6.011±2.64 2.820±0.78
ENSMUSG00000024235 ENSMUST00000025078 2.064±0.39 0.866±0.00 2.581±0.23 0.207±0.19 2.291±1.39 1.054±0.00 0.486±0.21 0.392±0.11 0.858±0.39 2.011±0.74 0.388±0.07 0.933±0.26 1.311±0.32 0.126±0.04
ENSMUST00000105472 N/A 0.478±0.12 N/A 0.085±0.00 1.672±0.00 0.791±0.00 0.550±0.00 0.514±0.00 0.668±0.00 N/A 0.286±0.00 1.367±0.53 0.516±0.00 0.079±0.05
ENSMUST00000172805 N/A 0.523±0.11 N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A 0.117±0.00 0.601±0.03 N/A N/A
ENSMUST00000173708 1.997±0.00 0.686±0.28 N/A 0.280±0.00 2.646±0.15 1.579±1.07 0.878±0.00 0.490±0.05 N/A N/A N/A 1.493±0.47 N/A 0.069±0.01
ENSMUST00000173930 0.748±0.18 0.701±0.23 N/A N/A 1.582±0.07 0.886±0.40 0.300±0.00 0.450±0.21 0.314±0.11 2.192±0.39 0.100±0.00 1.074±0.52 0.253±0.00 0.087±0.00

Loading