C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00015S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000023768-ENSDARG00000077092 CGP 7955 11:39669255-39726808
GeneTranscriptPositionBiotype
ENSDARG00000023768 (mfsd4a)
major facilitator superfamily domain containing 4a
ENSDART00000029157 (mfsd4a-201) 39669255-39692410 protein_coding
ENSDARG00000077092 (elk4)
ELK4, ETS-domain protein
ENSDART00000065613 (elk4-201) 39706318-39726808 protein_coding
ENSDART00000102850 (elk4-202) 39705459-39722015 protein_coding
CIL_00015S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174514-ENSG00000158711 CGP 9606 1:205568885-205631962
GeneTranscriptPositionBiotype
ENSG00000174514 (MFSD4)
major facilitator superfamily domain containing 4
ENST00000367147 (MFSD4-001) 205568977-205602918 protein_coding
ENST00000465651 (MFSD4-003) 205592037-205600550 retained_intron
ENST00000471425 (MFSD4-004) 205592129-205598141 retained_intron
ENST00000475956 (MFSD4-005) 205568885-205599251 nonsense_mediated_decay
ENST00000478555 (MFSD4-002) 205598040-205602918 retained_intron
ENST00000489709 (MFSD4-006) 205569021-205600462 protein_coding
ENST00000536357 (MFSD4-008) 205579566-205600802 protein_coding
ENST00000539267 (MFSD4-007) 205568984-205600784 nonsense_mediated_decay
ENST00000614644 (MFSD4-010) 205579598-205580834 processed_transcript
ENST00000616173 (MFSD4-009) 205579531-205583960 protein_coding
ENST00000621216 (MFSD4-011) 205579587-205584068 protein_coding
ENSG00000206762 (RNU6-418P)
RNA, U6 small nuclear 418, pseudogene
ENST00000384035 (RNU6-418P-201) 205595041-205595147 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015S_0001ENSDARG00000023768ENSDART00000029157ENSDARG00000077092ENSDART00000065613ENSDART00000102850CIL_00015S_0002ENSG00000174514ENST00000367147ENST00000465651ENST00000471425ENST00000475956ENST00000478555ENST00000489709ENST00000536357ENST00000539267ENST00000614644ENST00000616173ENST00000621216ENSG00000206762ENST00000384035
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015S_0001ENSDARG00000023768ENSDART00000029157ENSDARG00000077092ENSDART00000065613ENSDART00000102850CIL_00015S_0002ENSG00000174514ENST00000367147ENSG00000206762ENST00000384035
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023768 ENSDART00000029157 N/A N/A N/A 0.374±0.20 N/A N/A 0.811±0.49 6.754±0.00 0.346±0.00 N/A 0.226±0.00 N/A N/A N/A
ENSDARG00000077092 ENSDART00000065613 N/A N/A N/A 0.613±0.00 N/A N/A 0.479±0.15 1.262±0.74 0.199±0.00 N/A 0.180±0.00 N/A N/A N/A
ENSDART00000102850 N/A N/A N/A 0.835±0.00 N/A N/A 0.910±0.00 0.703±0.00 0.121±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000174514 ENST00000367147 N/A N/A 4.561±0.00 8.695±2.24 N/A N/A N/A 16.432±0.00 N/A N/A N/A N/A 2.027±0.58 N/A
ENST00000465651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206762 ENST00000384035 N/A N/A N/A 1.680±0.00 0.211±0.00 0.777±0.00 N/A 1.828±0.00 N/A N/A N/A 0.614±0.00 N/A 0.736±0.00

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