C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00015Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090191-ENSDARG00000079638 CGP 7955 20:53308260-53328383
GeneTranscriptPositionBiotype
ENSDARG00000079638 (SLC22A23 (2 of 2))
solute carrier family 22, member 23 		ENSDART00000111687 (SLC22A23 (2 of 2)-201) 53322080-53328383 protein_coding
ENSDARG00000090191 (PSMG4)
proteasome (prosome, macropain) assembly chaperone 4 		ENSDART00000124231 (PSMG4-201) 53308260-53313044 protein_coding
CIL_00015Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180822-ENSG00000137266 CGP 9606 6:3231403-3457022
GeneTranscriptPositionBiotype
ENSG00000137285 (TUBB2B)
tubulin, beta 2B class IIb 		ENST00000259818 (TUBB2B-001) 3224261-3227735 protein_coding
ENST00000473006 (TUBB2B-002) 3224283-3231730 processed_transcript
ENSG00000272320 (RP11-506K6.4)
 ENST00000607565 (RP11-506K6.4-001) 3311662-3313650 antisense
CIL_00015Z_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071451-ENSMUSG00000038267 CGP 10090 13:34162964-34345182
GeneTranscriptPositionBiotype
ENSMUSG00000038267 (Slc22a23)
solute carrier family 22, member 23 		ENSMUST00000040336 (Slc22a23-001) 34179158-34345182 protein_coding
ENSMUST00000128392 (Slc22a23-006) 34182867-34193531 retained_intron
ENSMUST00000143353 (Slc22a23-005) 34221370-34344203 processed_transcript
ENSMUST00000145038 (Slc22a23-004) 34204020-34344595 nonsense_mediated_decay
ENSMUST00000148390 (Slc22a23-002) 34179643-34344451 protein_coding
ENSMUSG00000071451 (Psmg4)
proteasome (prosome, macropain) assembly chaperone 4 		ENSMUST00000124996 (Psmg4-002) 34162964-34178168 protein_coding
ENSMUST00000147632 (Psmg4-001) 34162964-34178172 protein_coding
ENSMUSG00000088573 (Gm24530)
predicted gene, 24530 		ENSMUST00000157948 (Gm24530-201) 34276965-34277252 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Z_0001ENSDARG00000079638ENSDART00000111687ENSDARG00000090191ENSDART00000124231CIL_00015Z_0002ENSG00000137285ENST00000259818ENST00000473006ENSG00000272320ENST00000607565CIL_00015Z_0003ENSMUSG00000038267ENSMUST00000040336ENSMUST00000128392ENSMUST00000143353ENSMUST00000145038ENSMUST00000148390ENSMUSG00000071451ENSMUST00000124996ENSMUST00000147632ENSMUSG00000088573ENSMUST00000157948
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Z_0001ENSDARG00000079638ENSDART00000111687ENSDARG00000090191ENSDART00000124231CIL_00015Z_0002ENSG00000137285ENST00000259818ENST00000473006ENSG00000272320ENST00000607565CIL_00015Z_0003ENSMUSG00000038267ENSMUST00000040336ENSMUST00000128392ENSMUST00000148390ENSMUSG00000071451ENSMUST00000124996ENSMUST00000147632ENSMUSG00000088573ENSMUST00000157948
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079638 ENSDART00000111687 N/A N/A N/A 11.483±0.00 N/A N/A 2.266±1.19 N/A 0.361±0.00 N/A 0.903±0.00 N/A N/A N/A
ENSDARG00000090191 ENSDART00000124231 N/A N/A N/A 11.753±2.29 N/A N/A 25.442±0.71 2.880±0.00 1.403±0.00 N/A 16.512±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137285 ENST00000259818 N/A N/A 1.594±0.00 72.656±33.17 4.670±0.00 6.955±0.00 N/A 9.045±0.00 N/A N/A N/A 8.395±0.00 N/A 4.785±0.00
ENST00000473006 N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000272320 ENST00000607565 0.169±0.00 0.133±0.00 1.144±0.00 0.527±0.16 1.737±1.63 1.936±1.74 0.098±0.07 0.863±0.65 0.475±0.46 0.937±0.88 0.103±0.00 0.630±0.80 0.042±0.03 0.079±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038267 ENSMUST00000040336 2.011±1.28 1.534±0.64 3.558±1.44 6.105±2.27 1.281±0.30 10.464±4.67 0.574±0.05 5.949±3.61 4.820±1.24 7.498±2.25 0.852±0.19 0.662±0.00 3.016±0.96 0.164±0.04
ENSMUST00000128392 N/A N/A N/A 17.865±0.00 N/A 39.964±0.00 N/A N/A N/A N/A N/A 4.429±1.04 18.610±0.00 2.612±0.51
ENSMUST00000143353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148390 3.389±0.62 2.276±0.33 7.456±1.57 11.031±7.36 4.394±1.22 12.999±5.53 1.987±0.30 15.591±2.64 10.837±1.65 11.208±2.91 1.747±0.38 1.725±0.97 8.869±5.23 0.437±0.34
ENSMUSG00000071451 ENSMUST00000124996 12.661±2.34 18.136±5.71 14.948±2.52 23.796±7.94 17.013±4.43 13.521±4.08 8.216±3.23 19.437±1.78 9.447±3.24 13.333±2.40 2.920±0.61 31.812±10.79 23.109±27.36 10.339±2.31
ENSMUST00000147632 17.343±1.67 23.660±1.41 14.828±2.75 26.558±12.52 25.493±12.45 17.823±6.01 7.581±1.97 15.350±2.37 18.469±6.97 22.268±5.91 5.698±1.10 33.958±14.07 28.653±25.83 9.202±2.43
ENSMUSG00000088573 ENSMUST00000157948 0.282±0.00 0.384±0.01 0.070±0.00 0.560±0.31 N/A 0.763±0.17 0.227±0.01 1.113±0.76 0.596±0.25 1.039±0.19 N/A 1.180±0.00 0.648±0.09 0.262±0.00

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