C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000163_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102978-ENSG00000125170 CGP 9606 16:57462387-57487327
GeneTranscriptPositionBiotype
ENSG00000102978 (POLR2C)
polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 		ENST00000219252 (POLR2C-001) 57462387-57472010 protein_coding
ENST00000562599 (POLR2C-005) 57462669-57469198 nonsense_mediated_decay
ENST00000562953 (POLR2C-006) 57462667-57470269 retained_intron
ENST00000563115 (POLR2C-002) 57462660-57469903 retained_intron
ENST00000563589 (POLR2C-003) 57465723-57469270 retained_intron
ENST00000564626 (POLR2C-004) 57462777-57463512 retained_intron
ENST00000564651 (POLR2C-008) 57462674-57470271 processed_transcript
ENST00000567982 (POLR2C-007) 57462676-57470408 retained_intron
ENSG00000125170 (DOK4)
docking protein 4 		ENST00000340099 (DOK4-001) 57471958-57486495 protein_coding
ENST00000561659 (DOK4-003) 57474712-57479756 nonsense_mediated_decay
ENST00000561918 (DOK4-017) 57474890-57479794 processed_transcript
ENST00000562008 (DOK4-012) 57475564-57480377 protein_coding
ENST00000562737 (DOK4-010) 57475162-57481853 protein_coding
ENST00000563483 (DOK4-018) 57475514-57476310 retained_intron
ENST00000564378 (DOK4-013) 57475161-57479914 protein_coding
ENST00000566588 (DOK4-006) 57475170-57487139 protein_coding
ENST00000566705 (DOK4-009) 57475559-57484294 protein_coding
ENST00000566936 (DOK4-002) 57471922-57479805 protein_coding
ENST00000567175 (DOK4-005) 57475863-57487327 protein_coding
ENST00000567214 (DOK4-011) 57475199-57480417 protein_coding
ENST00000567276 (DOK4-016) 57475169-57479872 protein_coding
ENST00000568617 (DOK4-015) 57475169-57479872 protein_coding
ENST00000569010 (DOK4-008) 57473901-57484098 protein_coding
ENST00000569250 (DOK4-014) 57475143-57479899 protein_coding
ENST00000569538 (DOK4-007) 57475209-57487322 protein_coding
ENST00000569548 (DOK4-019) 57472877-57479874 protein_coding
CIL_000163_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031783-ENSMUSG00000040631 CGP 10090 8:94857450-94876312
GeneTranscriptPositionBiotype
ENSMUSG00000031783 (Polr2c)
polymerase (RNA) II (DNA directed) polypeptide C 		ENSMUST00000109521 (Polr2c-201) 94857450-94864242 protein_coding
ENSMUSG00000040631 (Dok4)
docking protein 4 		ENSMUST00000046461 (Dok4-201) 94863828-94876312 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000163_0001ENSG00000102978ENST00000219252ENST00000562599ENST00000562953ENST00000563115ENST00000563589ENST00000564626ENST00000564651ENST00000567982ENSG00000125170ENST00000340099ENST00000561659ENST00000561918ENST00000562008ENST00000562737ENST00000563483ENST00000564378ENST00000566588ENST00000566705ENST00000566936ENST00000567175ENST00000567214ENST00000567276ENST00000568617ENST00000569010ENST00000569250ENST00000569538ENST00000569548CIL_000163_0002ENSMUSG00000031783ENSMUST00000109521ENSMUSG00000040631ENSMUST00000046461
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000163_0001ENSG00000102978ENST00000219252ENSG00000125170ENST00000340099CIL_000163_0002ENSMUSG00000031783ENSMUST00000109521ENSMUSG00000040631ENSMUST00000046461
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102978 ENST00000219252 16.906±0.00 23.154±0.00 4.280±0.00 17.777±8.02 12.430±6.97 13.523±4.62 24.108±0.00 21.703±13.61 12.717±7.54 13.169±5.38 15.142±9.91 26.514±12.51 28.176±5.90 27.326±0.00
ENST00000562599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125170 ENST00000340099 N/A N/A N/A N/A 3.103±0.00 8.669±0.20 N/A 13.874±9.83 2.274±0.00 6.772±2.81 N/A 17.530±10.60 7.864±0.00 N/A
ENST00000561659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031783 ENSMUST00000109521 30.239±8.69 29.348±5.10 27.236±3.49 31.262±13.49 33.700±5.28 33.328±4.38 42.326±1.72 38.856±1.93 28.182±12.59 32.526±6.42 31.103±4.92 35.769±7.78 22.368±9.51 16.650±7.63
ENSMUSG00000040631 ENSMUST00000046461 11.591±1.95 6.990±1.76 5.616±0.65 6.261±2.57 9.006±1.82 67.379±7.90 10.634±1.20 8.543±1.88 8.063±3.74 18.862±3.89 2.735±0.51 7.480±2.49 7.287±0.87 N/A

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