C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078261-ENSDARG00000063588 CGP 7955 24:9413140-9490660
GeneTranscriptPositionBiotype
ENSDARG00000063588 (uba5)
ubiquitin-like modifier activating enzyme 5 		ENSDART00000093046 (uba5-002) 9473962-9490660 protein_coding
ENSDART00000157200 (uba5-201) 9474370-9490450 protein_coding
ENSDARG00000078261 (nphp3)
nephronophthisis 3 		ENSDART00000110629 (nphp3-201) 9416109-9464497 protein_coding
ENSDART00000142460 (nphp3-001) 9413140-9464727 protein_coding
CIL_00016N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000101152-ENSMUSG00000101152 CGP 10090 9:104040662-104075879
GeneTranscriptPositionBiotype
ENSMUSG00000032557 (Uba5)
ubiquitin-like modifier activating enzyme 5 		ENSMUST00000035166 (Uba5-001) 104046599-104063134 protein_coding
ENSMUST00000140768 (Uba5-002) 104049584-104063063 nonsense_mediated_decay
ENSMUST00000144195 (Uba5-004) 104047650-104056983 protein_coding
ENSMUST00000191568 (Uba5-005) 104057566-104060462 retained_intron
ENSMUSG00000090150 (Acad11)
acyl-Coenzyme A dehydrogenase family, member 11 		ENSMUST00000047799 (Acad11-001) 104063686-104127656 protein_coding
ENSMUST00000120854 (Acad11-002) 104063377-104127463 protein_coding
ENSMUST00000128714 (Acad11-004) 104123839-104127019 processed_transcript
ENSMUST00000154431 (Acad11-003) 104091055-104113494 processed_transcript
ENSMUST00000185819 (Acad11-007) 104063722-104065670 retained_intron
ENSMUST00000189133 (Acad11-008) 104110370-104113832 retained_intron
ENSMUST00000189998 (Acad11-006) 104095521-104108009 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016N_0001ENSDARG00000063588ENSDART00000093046ENSDART00000157200ENSDARG00000078261ENSDART00000110629ENSDART00000142460CIL_00016N_0002ENSMUSG00000032557ENSMUST00000035166ENSMUST00000140768ENSMUST00000144195ENSMUST00000191568ENSMUSG00000090150ENSMUST00000047799ENSMUST00000120854ENSMUST00000128714ENSMUST00000154431ENSMUST00000185819ENSMUST00000189133ENSMUST00000189998
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016N_0001ENSDARG00000063588ENSDART00000093046ENSDART00000157200ENSDARG00000078261ENSDART00000110629ENSDART00000142460CIL_00016N_0002ENSMUSG00000032557ENSMUST00000035166ENSMUST00000144195ENSMUST00000191568ENSMUSG00000090150ENSMUST00000047799ENSMUST00000120854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063588 ENSDART00000093046 N/A N/A N/A 7.598±1.29 N/A N/A 2.299±1.48 6.415±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000157200 N/A N/A N/A 3.038±0.00 N/A N/A 1.174±0.00 N/A 0.499±0.00 N/A 0.401±0.00 N/A N/A N/A
ENSDARG00000078261 ENSDART00000110629 N/A N/A N/A 0.316±0.00 N/A N/A 3.805±2.98 4.550±0.32 0.139±0.00 N/A N/A N/A N/A N/A
ENSDART00000142460 N/A N/A N/A 1.044±0.57 N/A N/A 1.098±0.89 0.938±0.36 N/A N/A 0.137±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032557 ENSMUST00000035166 8.200±2.02 10.461±1.07 16.992±2.69 18.304±5.82 7.673±1.19 9.391±0.80 4.557±0.72 10.197±1.81 9.649±2.36 9.038±1.76 4.529±0.53 9.362±2.53 21.304±5.59 3.194±1.25
ENSMUST00000140768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144195 N/A N/A N/A 74.963±0.00 N/A N/A N/A N/A N/A N/A 2.060±0.18 60.099±52.58 89.956±66.01 15.936±0.00
ENSMUST00000191568 2.992±0.00 2.797±0.00 2.781±0.54 4.232±0.46 1.747±0.34 2.178±0.21 1.296±0.00 1.123±0.00 1.911±0.35 2.750±0.58 0.644±0.11 3.571±0.89 3.554±1.06 1.166±0.11
ENSMUSG00000090150 ENSMUST00000047799 39.308±16.55 10.917±2.08 13.061±1.63 N/A 24.300±7.46 29.421±4.19 37.284±1.91 65.999±4.48 66.216±46.59 8.223±0.87 13.471±0.53 10.841±1.61 11.848±3.91 5.740±1.11
ENSMUST00000120854 N/A N/A N/A N/A 18.510±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.490±0.28
ENSMUST00000128714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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