C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100664-ENSG00000075413 CGP 9606 14:103333544-103503831
GeneTranscriptPositionBiotype
ENSG00000075413 (MARK3)
MAP/microtubule affinity-regulating kinase 3 		ENST00000216288 (MARK3-005) 103385860-103503826 protein_coding
ENST00000303622 (MARK3-004) 103385541-103503831 protein_coding
ENST00000335102 (MARK3-026) 103386030-103503227 protein_coding
ENST00000416682 (MARK3-003) 103385453-103503360 protein_coding
ENST00000429436 (MARK3-001) 103385520-103503826 protein_coding
ENST00000440884 (MARK3-002) 103385392-103503252 protein_coding
ENST00000553942 (MARK3-006) 103385985-103503245 protein_coding
ENST00000554627 (MARK3-007) 103465714-103503281 protein_coding
ENST00000555235 (MARK3-010) 103498865-103503827 retained_intron
ENST00000556463 (MARK3-009) 103489397-103503827 retained_intron
ENST00000556744 (MARK3-008) 103475124-103503282 protein_coding
ENST00000558223 (MARK3-024) 103386004-103465898 retained_intron
ENST00000558611 (MARK3-025) 103466363-103467685 retained_intron
ENST00000558698 (MARK3-022) 103417273-103465706 processed_transcript
ENST00000558787 (MARK3-021) 103491539-103503071 retained_intron
ENST00000558953 (MARK3-018) 103466053-103469303 processed_transcript
ENST00000559268 (MARK3-017) 103417328-103465616 processed_transcript
ENST00000559274 (MARK3-019) 103467714-103492034 retained_intron
ENST00000559328 (MARK3-011) 103385411-103428440 processed_transcript
ENST00000560417 (MARK3-013) 103385987-103465606 protein_coding
ENST00000560603 (MARK3-012) 103385417-103428445 processed_transcript
ENST00000560731 (MARK3-016) 103417328-103457176 processed_transcript
ENST00000561071 (MARK3-015) 103405134-103503066 processed_transcript
ENST00000561164 (MARK3-023) 103429193-103465730 processed_transcript
ENST00000561225 (MARK3-014) 103386239-103451995 protein_coding
ENST00000561314 (MARK3-020) 103474992-103503282 protein_coding
ENSG00000100664 (EIF5)
eukaryotic translation initiation factor 5 		ENST00000216554 (EIF5-001) 103334002-103345025 protein_coding
ENST00000392715 (EIF5-002) 103334861-103342640 protein_coding
ENST00000558265 (EIF5-011) 103334392-103338750 protein_coding
ENST00000558316 (EIF5-010) 103334387-103337227 protein_coding
ENST00000558506 (EIF5-003) 103334949-103343228 protein_coding
ENST00000558551 (EIF5-015) 103335481-103336886 retained_intron
ENST00000558800 (EIF5-022) 103340404-103341356 retained_intron
ENST00000559011 (EIF5-018) 103338177-103338824 retained_intron
ENST00000559130 (EIF5-013) 103334894-103336728 protein_coding
ENST00000559249 (EIF5-006) 103334189-103336178 retained_intron
ENST00000559532 (EIF5-014) 103334896-103336849 protein_coding
ENST00000559923 (EIF5-017) 103336764-103337737 retained_intron
ENST00000560200 (EIF5-009) 103334387-103337227 processed_transcript
ENST00000560338 (EIF5-007) 103334192-103336825 protein_coding
ENST00000560763 (EIF5-008) 103334237-103336117 protein_coding
ENST00000560877 (EIF5-005) 103333544-103335844 processed_transcript
ENST00000561023 (EIF5-021) 103336685-103338348 retained_intron
ENST00000561325 (EIF5-012) 103334803-103336849 protein_coding
ENST00000561380 (EIF5-019) 103338735-103340561 retained_intron
ENST00000561406 (EIF5-020) 103340970-103342386 processed_transcript
ENST00000561439 (EIF5-016) 103336506-103338851 retained_intron
ENSG00000243904 (RP11-600F24.1)
 ENST00000485258 (RP11-600F24.1-001) 103374033-103374916 processed_pseudogene
ENSG00000244691 (RPL10AP1)
ribosomal protein L10a pseudogene 1 		ENST00000490023 (RPL10AP1-001) 103412119-103412761 processed_pseudogene
ENSG00000259428 (HMGB3P26)
high mobility group box 3 pseudogene 26 		ENST00000560051 (HMGB3P26-001) 103364239-103364820 processed_pseudogene
ENSG00000272533 (SNORA28)
small nucleolar RNA, H/ACA box 28 		ENST00000606769 (SNORA28-201) 103337849-103337974 snoRNA
CIL_00016S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021282-ENSMUSG00000007411 CGP 10090 12:111538101-111656227
GeneTranscriptPositionBiotype
ENSMUSG00000007411 (Mark3)
MAP/microtubule affinity-regulating kinase 3 		ENSMUST00000075281 (Mark3-201) 111574510-111656227 protein_coding
ENSMUST00000084953 (Mark3-202) 111574510-111656227 protein_coding
ENSMUSG00000021282 (Eif5)
eukaryotic translation initiation factor 5 		ENSMUST00000050993 (Eif5-201) 111538853-111544923 protein_coding
ENSMUST00000166123 (Eif5-202) 111538101-111546753 protein_coding
ENSMUSG00000064493 (Snora28)
small nucleolar RNA, H/ACA box 28 		ENSMUST00000082559 (Snora28-201) 111540941-111541067 snoRNA
ENSMUSG00000096995 (2810029C07Rik)
RIKEN cDNA 2810029C07 gene 		ENSMUST00000180698 (2810029C07Rik-201) 111572321-111574402 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016S_0001ENSG00000075413ENST00000216288ENST00000303622ENST00000416682ENST00000429436ENST00000440884ENST00000553942ENST00000554627ENST00000555235ENST00000556463ENST00000558223ENST00000559274ENST00000561314ENSG00000100664ENST00000216554ENST00000392715ENST00000558506ENST00000558800ENST00000561439ENSG00000243904ENST00000485258ENSG00000244691ENST00000490023ENSG00000259428ENST00000560051ENSG00000272533ENST00000606769CIL_00016S_0002ENSMUSG00000007411ENSMUST00000075281ENSMUST00000084953ENSMUSG00000021282ENSMUST00000050993ENSMUST00000166123ENSMUSG00000064493ENSMUST00000082559ENSMUSG00000096995ENSMUST00000180698
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075413 ENST00000216288 N/A N/A N/A 5.062±0.00 N/A 3.533±0.00 N/A 1.924±0.00 N/A 3.492±0.00 N/A 4.550±0.00 3.976±0.96 5.901±0.00
ENST00000303622 4.393±0.00 6.618±0.00 N/A 4.304±0.00 3.789±1.88 N/A N/A 7.006±0.00 1.867±0.00 4.473±0.00 3.215±0.00 5.046±0.00 6.208±0.00 9.661±0.00
ENST00000335102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.079±0.00
ENST00000429436 N/A N/A N/A N/A N/A N/A 4.962±0.00 N/A N/A N/A 4.215±0.00 6.773±1.12 2.623±0.00 N/A
ENST00000440884 3.242±0.00 N/A N/A 3.042±0.00 2.805±0.00 3.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553942 3.927±0.00 N/A 2.529±0.00 8.598±2.75 9.653±0.00 4.246±0.14 8.868±0.00 5.436±0.00 2.390±0.68 5.099±0.00 6.312±0.00 N/A 3.004±0.00 7.772±0.82
ENST00000554627 N/A 8.979±0.00 N/A N/A N/A N/A 13.025±0.00 9.728±0.00 2.360±0.00 7.227±0.00 7.049±0.00 9.161±0.70 6.674±1.54 12.419±0.70
ENST00000555235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.734±0.00 N/A N/A
ENST00000556463 1.876±0.00 2.947±0.00 N/A 3.780±0.00 2.000±0.00 N/A N/A N/A N/A N/A N/A 3.792±0.00 N/A N/A
ENST00000556744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558223 N/A N/A N/A N/A 8.518±0.00 N/A N/A N/A N/A 11.731±0.00 N/A N/A N/A N/A
ENST00000558611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559274 N/A N/A N/A N/A N/A N/A 13.479±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000559328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561314 N/A 22.674±0.00 N/A N/A N/A N/A N/A N/A 7.395±0.00 N/A N/A N/A N/A N/A
ENSG00000100664 ENST00000216554 N/A 5.629±0.00 N/A 12.235±4.08 N/A 2.386±0.00 1.168±0.00 3.721±0.00 2.263±0.00 2.257±0.00 1.620±0.00 3.347±1.36 N/A 7.091±2.87
ENST00000392715 N/A N/A 2.264±0.00 7.042±0.00 7.218±0.00 7.271±0.00 3.967±0.00 8.783±0.00 6.198±0.00 4.503±0.00 2.923±0.92 6.605±0.78 10.442±0.00 26.397±0.00
ENST00000558265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558506 N/A N/A 2.237±0.00 16.905±14.02 6.037±0.00 1.852±0.00 1.440±0.00 8.988±0.00 5.116±0.00 7.700±0.00 6.468±0.64 13.586±5.73 12.215±0.00 9.496±0.00
ENST00000558551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.522±0.00
ENST00000559011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561439 N/A N/A 5.923±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 20.703±0.00 43.252±0.00 70.687±0.00
ENSG00000243904 ENST00000485258 0.020±0.00 0.146±0.00 N/A N/A 0.022±0.00 0.080±0.00 0.038±0.00 0.107±0.00 N/A 0.080±0.00 0.054±0.00 0.037±0.01 0.074±0.00 0.057±0.04
ENSG00000244691 ENST00000490023 0.025±0.00 0.163±0.00 N/A 0.117±0.06 0.056±0.00 0.079±0.05 0.194±0.00 N/A N/A 0.212±0.00 N/A 0.065±0.00 0.077±0.00 0.268±0.07
ENSG00000259428 ENST00000560051 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00
ENSG00000272533 ENST00000606769 N/A 0.148±0.00 N/A 4.974±0.00 N/A N/A N/A 54.578±0.00 7.230±0.00 0.785±0.00 N/A N/A 0.801±0.00 0.758±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007411 ENSMUST00000075281 4.295±0.00 5.725±0.00 6.329±0.66 N/A 3.915±0.69 8.102±1.53 N/A 13.245±2.24 7.937±3.80 3.486±1.10 3.123±0.00 4.742±1.66 21.300±7.80 N/A
ENSMUST00000084953 10.180±3.45 12.298±2.47 14.253±0.82 32.503±8.20 8.788±0.94 5.334±1.50 6.638±0.69 5.690±1.97 5.110±2.64 12.188±1.30 6.124±1.88 16.387±5.78 21.359±11.40 8.473±0.91
ENSMUSG00000021282 ENSMUST00000050993 N/A N/A 12.464±0.00 85.444±0.00 7.742±0.00 N/A 4.730±0.00 N/A 31.277±7.38 N/A 10.725±1.62 49.237±40.22 76.307±59.69 89.582±117.47
ENSMUST00000166123 23.499±7.25 184.212±31.95 42.939±0.23 34.768±15.75 54.917±40.88 58.855±11.63 11.724±4.73 32.462±8.15 46.493±20.85 46.388±16.83 27.222±7.93 69.679±42.96 28.558±19.04 32.003±10.11
ENSMUSG00000064493 ENSMUST00000082559 710.289±0.00 N/A 259.353±14.86 18.373±7.50 N/A N/A N/A N/A 329.597±646.77 N/A N/A 895.156±1430.27 19.050±6.20 5.925±0.00
ENSMUSG00000096995 ENSMUST00000180698 0.465±0.11 0.210±0.10 0.205±0.00 2.988±1.93 0.234±0.06 0.106±0.02 0.234±0.03 1.645±0.18 0.145±0.08 0.377±0.09 0.168±0.04 0.439±0.13 1.077±0.91 6.936±1.05

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