C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00016U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088146-ENSDARG00000088146 CGP 7955 10:20426572-20482737
GeneTranscriptPositionBiotype
ENSDARG00000091492 (LOXL2 (3 of 3))
lysyl oxidase-like 2
ENSDART00000127848 (LOXL2 (3 of 3)-201) 20441709-20480325 protein_coding
CIL_00016U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104679-ENSG00000134013 CGP 9606 8:23270120-23425328
GeneTranscriptPositionBiotype
ENSG00000104679 (R3HCC1)
R3H domain and coiled-coil containing 1
ENST00000265806 (R3HCC1-003) 23287908-23296279 protein_coding
ENST00000411463 (R3HCC1-201) 23287929-23296121 protein_coding
ENST00000517633 (R3HCC1-009) 23270120-23289034 processed_transcript
ENST00000518454 (R3HCC1-002) 23287908-23296121 protein_coding
ENST00000518840 (R3HCC1-004) 23288184-23290288 protein_coding
ENST00000519952 (R3HCC1-006) 23288124-23291468 protein_coding
ENST00000520480 (R3HCC1-008) 23290413-23295630 protein_coding
ENST00000521588 (R3HCC1-005) 23288422-23290468 protein_coding
ENST00000522012 (R3HCC1-001) 23287908-23296121 processed_transcript
ENST00000523720 (R3HCC1-007) 23290976-23293373 processed_transcript
ENSG00000134013 (LOXL2)
lysyl oxidase-like 2
ENST00000389131 (LOXL2-001) 23297189-23404240 protein_coding
ENST00000518083 (LOXL2-013) 23360166-23371126 protein_coding
ENST00000518472 (LOXL2-003) 23331437-23333553 processed_transcript
ENST00000518878 (LOXL2-011) 23319885-23341176 nonsense_mediated_decay
ENST00000519243 (LOXL2-010) 23368065-23404226 protein_coding
ENST00000519809 (LOXL2-004) 23319961-23329115 processed_transcript
ENST00000520349 (LOXL2-005) 23319885-23333495 protein_coding
ENST00000520617 (LOXL2-008) 23316734-23320005 retained_intron
ENST00000520871 (LOXL2-009) 23360090-23425328 protein_coding
ENST00000520925 (LOXL2-006) 23321737-23333636 retained_intron
ENST00000522446 (LOXL2-007) 23319927-23328768 retained_intron
ENST00000523833 (LOXL2-016) 23316984-23404126 protein_coding
ENST00000524075 (LOXL2-015) 23403906-23425301 retained_intron
ENST00000524144 (LOXL2-014) 23360090-23425291 protein_coding
ENST00000524168 (LOXL2-012) 23360204-23404076 protein_coding
ENSG00000253837 (RP11-177H13.2)
ENST00000517420 (RP11-177H13.2-002) 23336171-23341536 retained_intron
ENST00000519692 (RP11-177H13.2-001) 23336208-23366125 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016U_0001ENSDARG00000091492ENSDART00000127848CIL_00016U_0002ENSG00000104679ENST00000265806ENST00000411463ENST00000517633ENST00000518454ENST00000518840ENST00000519952ENST00000520480ENST00000521588ENST00000522012ENST00000523720ENSG00000134013ENST00000389131ENST00000518083ENST00000518472ENST00000518878ENST00000519243ENST00000519809ENST00000520349ENST00000520617ENST00000520871ENST00000520925ENST00000522446ENST00000523833ENST00000524075ENST00000524144ENST00000524168ENSG00000253837ENST00000517420ENST00000519692
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016U_0001ENSDARG00000091492ENSDART00000127848CIL_00016U_0002ENSG00000104679ENST00000265806ENST00000411463ENST00000518454ENST00000518840ENST00000519952ENST00000520480ENST00000521588ENSG00000134013ENST00000389131ENSG00000253837ENST00000517420
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000091492 ENSDART00000127848 N/A N/A N/A 0.113±0.04 N/A N/A 0.113±0.00 1.145±0.00 0.059±0.00 N/A 2.243±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104679 ENST00000265806 2.269±0.00 N/A 1.057±0.00 2.120±0.00 10.806±0.00 0.616±0.00 N/A N/A 3.942±0.00 N/A N/A 9.722±9.27 14.204±0.00 N/A
ENST00000411463 4.567±0.00 10.230±0.00 N/A 5.718±4.79 10.888±0.00 8.595±0.00 4.953±4.46 7.173±3.66 4.515±2.18 5.497±2.43 9.929±0.00 9.625±2.76 6.345±3.68 22.526±7.39
ENST00000517633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518454 N/A N/A N/A N/A N/A N/A N/A 0.721±0.00 N/A N/A N/A 0.571±0.00 N/A N/A
ENST00000518840 N/A N/A 0.982±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.005±0.00 N/A N/A
ENST00000519952 N/A N/A N/A 2.539±0.00 0.464±0.00 N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A
ENST00000520480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.836±0.00 11.267±0.00 37.650±0.00
ENST00000521588 N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134013 ENST00000389131 9.841±0.00 8.936±0.00 N/A N/A 20.024±0.00 5.482±4.23 3.065±0.00 4.720±0.00 N/A 9.146±0.00 N/A 11.163±3.95 32.754±19.41 5.730±0.00
ENST00000518083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253837 ENST00000517420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.720±0.00 N/A
ENST00000519692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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