C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00016X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014914-ENSDARG00000060510 CGP 7955 14:34448790-34480123
GeneTranscriptPositionBiotype
ENSDARG00000014914 (lamp2)
lysosomal membrane glycoprotein 2
ENSDART00000124242 (lamp2-001) 34449655-34456576 protein_coding
ENSDART00000132813 (lamp2-002) 34449072-34453949 protein_coding
ENSDART00000136441 (lamp2-006) 34450806-34452718 processed_transcript
ENSDART00000140001 (lamp2-005) 34453600-34456497 protein_coding
ENSDART00000142162 (lamp2-003) 34448790-34452973 processed_transcript
ENSDART00000147059 (lamp2-004) 34449219-34456414 protein_coding
ENSDARG00000060510 (cul4b)
cullin 4B
ENSDART00000085295 (cul4b-201) 34461365-34479591 protein_coding
ENSDART00000149254 (cul4b-001) 34461165-34480123 protein_coding
ENSDART00000149522 (cul4b-002) 34476736-34479840 retained_intron
CIL_00016X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005893-ENSG00000158290 CGP 9606 X:120427827-120575794
GeneTranscriptPositionBiotype
ENSG00000005893 (LAMP2)
lysosomal-associated membrane protein 2
ENST00000200639 (LAMP2-001) 120430826-120469306 protein_coding
ENST00000371335 (LAMP2-002) 120436494-120469306 protein_coding
ENST00000434600 (LAMP2-004) 120427827-120469365 protein_coding
ENST00000486593 (LAMP2-003) 120431248-120449068 nonsense_mediated_decay
ENSG00000158290 (CUL4B)
cullin 4B
ENST00000336592 (CUL4B-004) 120526396-120561440 protein_coding
ENST00000371322 (CUL4B-003) 120524609-120560700 protein_coding
ENST00000371323 (CUL4B-007) 120543746-120559943 protein_coding
ENST00000404115 (CUL4B-001) 120526641-120575794 protein_coding
ENST00000467641 (CUL4B-005) 120557917-120561302 processed_transcript
ENST00000486604 (CUL4B-002) 120571176-120575524 processed_transcript
ENST00000497616 (CUL4B-006) 120532336-120538547 processed_transcript
CIL_00016X_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016534-ENSMUSG00000031095 CGP 10090 X:38401357-38576196
GeneTranscriptPositionBiotype
ENSMUSG00000016534 (Lamp2)
lysosomal-associated membrane protein 2
ENSMUST00000016678 (Lamp2-001) 38405062-38456454 protein_coding
ENSMUST00000061755 (Lamp2-002) 38419507-38456454 protein_coding
ENSMUST00000074913 (Lamp2-003) 38401357-38456454 protein_coding
ENSMUST00000136817 (Lamp2-004) 38429882-38443150 retained_intron
ENSMUST00000144663 (Lamp2-005) 38452890-38456414 processed_transcript
ENSMUSG00000031095 (Cul4b)
cullin 4B
ENSMUST00000016681 (Cul4b-004) 38533274-38564525 protein_coding
ENSMUST00000050083 (Cul4b-003) 38533574-38576183 protein_coding
ENSMUST00000115118 (Cul4b-001) 38533274-38576196 protein_coding
ENSMUST00000147129 (Cul4b-002) 38533570-38564662 nonsense_mediated_decay
ENSMUSG00000087390 (Gm7598)
predicted gene 7598
ENSMUST00000130251 (Gm7598-001) 38476461-38482486 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016X_0001ENSDARG00000014914ENSDART00000124242ENSDART00000132813ENSDART00000136441ENSDART00000140001ENSDART00000142162ENSDART00000147059ENSDARG00000060510ENSDART00000085295ENSDART00000149254ENSDART00000149522CIL_00016X_0002ENSG00000005893ENST00000200639ENST00000371335ENST00000434600ENST00000486593ENSG00000158290ENST00000336592ENST00000371322ENST00000371323ENST00000404115ENST00000467641ENST00000486604ENST00000497616CIL_00016X_0003ENSMUSG00000016534ENSMUST00000016678ENSMUST00000061755ENSMUST00000074913ENSMUST00000136817ENSMUST00000144663ENSMUSG00000031095ENSMUST00000016681ENSMUST00000050083ENSMUST00000115118ENSMUST00000147129ENSMUSG00000087390ENSMUST00000130251
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016X_0001ENSDARG00000014914ENSDART00000124242ENSDART00000140001ENSDART00000147059ENSDARG00000060510ENSDART00000085295ENSDART00000149254ENSDART00000149522CIL_00016X_0002ENSG00000005893ENST00000200639ENST00000371335ENST00000434600ENST00000486593ENSG00000158290ENST00000336592ENST00000371322ENST00000404115CIL_00016X_0003ENSMUSG00000016534ENSMUST00000016678ENSMUST00000061755ENSMUSG00000031095ENSMUST00000016681ENSMUST00000050083ENSMUST00000115118ENSMUST00000147129ENSMUSG00000087390ENSMUST00000130251
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014914 ENSDART00000124242 N/A N/A N/A 21.017±10.01 N/A N/A 38.511±18.63 60.549±15.46 8.935±0.00 N/A 17.437±0.00 N/A N/A N/A
ENSDART00000132813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140001 N/A N/A N/A N/A N/A N/A 61.114±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147059 N/A N/A N/A N/A N/A N/A 24.739±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000060510 ENSDART00000085295 N/A N/A N/A N/A N/A N/A 2.945±0.00 N/A 1.597±0.00 N/A N/A N/A N/A N/A
ENSDART00000149254 N/A N/A N/A 21.717±6.66 N/A N/A 19.515±5.89 24.319±0.00 6.102±0.00 N/A 5.947±0.00 N/A N/A N/A
ENSDART00000149522 N/A N/A N/A N/A N/A N/A 12.907±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005893 ENST00000200639 13.241±0.00 10.886±0.00 10.995±0.00 9.009±0.00 8.784±3.59 9.160±4.62 3.548±1.90 24.832±0.79 16.428±10.61 15.647±0.25 3.047±0.00 15.720±1.57 15.438±7.71 N/A
ENST00000371335 18.293±0.00 11.917±0.00 2.949±0.00 43.611±33.58 13.147±6.14 8.894±4.72 5.853±3.44 11.937±6.98 8.129±3.07 12.373±4.31 19.152±13.89 13.216±1.88 8.491±0.99 9.160±5.09
ENST00000434600 N/A N/A 5.505±0.00 10.851±0.00 3.639±0.00 3.944±0.00 1.915±0.00 4.582±0.00 N/A N/A 2.274±0.00 N/A N/A N/A
ENST00000486593 N/A N/A 13.621±0.00 N/A N/A N/A N/A N/A N/A N/A 8.213±0.00 13.975±0.00 N/A N/A
ENSG00000158290 ENST00000336592 4.337±0.00 N/A 1.711±0.00 4.075±0.00 5.629±0.00 N/A 0.664±0.00 5.181±0.00 3.488±0.00 4.793±0.00 1.206±0.00 4.316±0.00 N/A N/A
ENST00000371322 11.143±0.00 7.854±0.00 0.550±0.00 3.702±0.95 4.705±2.75 8.755±5.17 2.630±0.00 7.905±0.00 3.318±2.42 4.309±2.37 0.833±0.78 5.644±1.77 3.188±1.34 15.359±0.00
ENST00000371323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404115 N/A N/A 0.810±0.00 N/A N/A N/A N/A N/A N/A 1.175±0.00 0.334±0.00 N/A N/A 14.205±9.22
ENST00000467641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016534 ENSMUST00000016678 22.670±4.16 17.989±8.24 27.031±1.90 N/A 21.739±3.91 16.488±2.74 8.673±0.22 148.818±20.05 66.766±49.08 22.260±5.99 6.563±0.70 18.978±15.71 43.372±24.52 14.100±6.30
ENSMUST00000061755 54.097±16.39 21.402±5.13 54.422±0.03 10.416±5.33 38.970±3.29 15.824±4.08 30.387±4.89 61.400±8.28 50.840±27.66 55.931±1.97 12.599±1.10 39.044±8.14 31.168±17.47 6.253±2.87
ENSMUST00000074913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031095 ENSMUST00000016681 0.942±0.14 1.268±0.36 N/A N/A 1.897±0.72 0.699±0.23 0.459±0.26 1.363±0.44 0.725±0.22 1.008±0.30 0.545±0.05 3.185±1.13 11.372±0.00 N/A
ENSMUST00000050083 2.064±0.00 1.449±0.24 N/A N/A 1.707±0.19 0.854±0.16 N/A 1.960±0.45 1.579±0.41 1.210±0.33 N/A 2.017±1.08 29.122±12.57 4.857±3.14
ENSMUST00000115118 N/A N/A N/A N/A N/A 0.989±0.23 0.527±0.18 N/A N/A N/A N/A N/A 14.649±6.20 5.153±0.57
ENSMUST00000147129 0.675±0.00 0.959±0.21 N/A 2.644±0.00 1.058±0.37 0.791±0.23 0.412±0.00 1.667±0.01 0.508±0.07 1.245±0.49 N/A 1.348±0.48 12.905±0.00 N/A
ENSMUSG00000087390 ENSMUST00000130251 0.197±0.03 0.111±0.05 0.211±0.02 0.162±0.12 0.181±0.13 0.053±0.02 0.131±0.03 0.127±0.07 0.043±0.02 0.222±0.05 0.325±0.05 0.350±0.13 0.152±0.08 0.037±0.02

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