C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00017N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128713-ENSG00000128710 CGP 9606 2:176104216-176119942
GeneTranscriptPositionBiotype
ENSG00000128710 (HOXD10)
homeobox D10
ENST00000249501 (HOXD10-001) 176116579-176119942 protein_coding
ENST00000490088 (HOXD10-002) 176108790-176119394 processed_transcript
ENST00000549469 (HOXD10-003) 176108877-176119243 processed_transcript
ENSG00000128713 (HOXD11)
homeobox D11
ENST00000249504 (HOXD11-001) 176107286-176109588 protein_coding
ENST00000498438 (HOXD11-003) 176104216-176109754 processed_transcript
ENST00000619244 (HOXD11-201) 176107356-176109243 protein_coding
CIL_00017N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042499-ENSMUSG00000050368 CGP 10090 2:74679557-74695105
GeneTranscriptPositionBiotype
ENSMUSG00000042499 (Hoxd11)
homeobox D11
ENSMUST00000048086 (Hoxd11-002) 74679557-74687016 processed_transcript
ENSMUST00000142312 (Hoxd11-001) 74682323-74684168 protein_coding
ENSMUSG00000050368 (Hoxd10)
homeobox D10
ENSMUST00000061745 (Hoxd10-001) 74691924-74695105 protein_coding
ENSMUSG00000099521 (RP23-313J15.17)
predicted gene 28309
ENSMUST00000136302 (RP23-313J15.17-001) 74683446-74694194 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017N_0001ENSG00000128710ENST00000249501ENST00000490088ENST00000549469ENSG00000128713ENST00000249504ENST00000498438ENST00000619244CIL_00017N_0002ENSMUSG00000042499ENSMUST00000048086ENSMUST00000142312ENSMUSG00000050368ENSMUST00000061745ENSMUSG00000099521ENSMUST00000136302
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017N_0001ENSG00000128710ENST00000249501ENST00000490088ENST00000549469ENSG00000128713ENST00000249504ENST00000498438ENST00000619244CIL_00017N_0002ENSMUSG00000042499ENSMUST00000048086ENSMUST00000142312ENSMUSG00000050368ENSMUST00000061745ENSMUSG00000099521ENSMUST00000136302
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128710 ENST00000249501 0.301±0.00 0.979±0.00 2.790±0.00 N/A 1.649±1.53 0.889±0.19 N/A 2.062±2.03 0.555±0.00 0.033±0.00 N/A 0.628±0.37 0.325±0.17 1.875±0.57
ENST00000490088 N/A N/A N/A N/A N/A 1.061±0.00 N/A 0.036±0.00 N/A N/A N/A N/A 0.086±0.00 N/A
ENST00000549469 N/A N/A 2.852±0.00 N/A 0.197±0.00 N/A N/A N/A N/A 0.082±0.00 N/A 0.915±0.00 0.209±0.00 N/A
ENSG00000128713 ENST00000249504 N/A N/A N/A N/A N/A 1.966±0.00 N/A N/A N/A N/A N/A N/A 1.064±0.00 0.886±0.00
ENST00000498438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.681±0.00 0.640±0.00 N/A
ENST00000619244 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A 1.970±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042499 ENSMUST00000048086 N/A N/A 2.315±0.00 0.006±0.00 N/A N/A 0.009±0.00 0.577±0.00 0.008±0.01 N/A N/A 0.248±0.00 0.051±0.03 0.049±0.03
ENSMUST00000142312 N/A N/A N/A 0.020±0.00 N/A 2.091±0.58 N/A 1.491±0.00 0.056±0.00 0.072±0.04 N/A 0.798±0.10 N/A 0.129±0.00
ENSMUSG00000050368 ENSMUST00000061745 7.320±9.60 N/A 8.354±3.47 0.032±0.02 0.322±0.24 N/A 0.036±0.00 3.845±0.73 0.029±0.01 0.050±0.00 2.079±0.35 2.884±0.76 0.702±0.27 0.442±0.15
ENSMUSG00000099521 ENSMUST00000136302 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.742±0.00 N/A

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