C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000008018-ENSG00000112592 CGP 9606 6:170535117-170572870
GeneTranscriptPositionBiotype
ENSG00000008018 (PSMB1)
proteasome (prosome, macropain) subunit, beta type, 1 		ENST00000262193 (PSMB1-001) 170535117-170553341 protein_coding
ENST00000462957 (PSMB1-002) 170535222-170550441 processed_transcript
ENSG00000112592 (TBP)
TATA box binding protein 		ENST00000230354 (TBP-001) 170554379-170572870 protein_coding
ENST00000392092 (TBP-201) 170554333-170572869 protein_coding
ENST00000421512 (TBP-004) 170554302-170566957 protein_coding
ENST00000423353 (TBP-003) 170554605-170562188 protein_coding
ENST00000446829 (TBP-002) 170569612-170572853 protein_coding
ENST00000540980 (TBP-202) 170554333-170572869 protein_coding
ENST00000616883 (TBP-203) 170554333-170572869 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00018G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014769-ENSMUSG00000014767 CGP 10090 17:15475721-15528379
GeneTranscriptPositionBiotype
ENSMUSG00000014767 (Tbp)
TATA box binding protein 		ENSMUST00000014911 (Tbp-003) 15499888-15517427 protein_coding
ENSMUST00000117593 (Tbp-004) 15499960-15517427 protein_coding
ENSMUST00000118001 (Tbp-002) 15499910-15517427 protein_coding
ENSMUST00000119879 (Tbp-011) 15499922-15514372 protein_coding
ENSMUST00000143924 (Tbp-005) 15499912-15507359 protein_coding
ENSMUST00000147081 (Tbp-006) 15499901-15507454 protein_coding
ENSMUST00000149518 (Tbp-009) 15515483-15516935 retained_intron
ENSMUST00000153480 (Tbp-008) 15504583-15516868 protein_coding
ENSMUST00000155051 (Tbp-007) 15499928-15504447 protein_coding
ENSMUST00000159197 (Tbp-010) 15499888-15504605 protein_coding
ENSMUST00000162505 (Tbp-001) 15499888-15528379 protein_coding
ENSMUSG00000014769 (Psmb1)
proteasome (prosome, macropain) subunit, beta type 1 		ENSMUST00000014913 (Psmb1-201) 15475721-15498276 protein_coding
ENSMUSG00000014771 (Pdcd2)
programmed cell death 2 		ENSMUST00000054450 (Pdcd2-001) 15521575-15527301 protein_coding
ENSMUST00000125709 (Pdcd2-005) 15521593-15522143 retained_intron
ENSMUST00000137233 (Pdcd2-004) 15522791-15526986 retained_intron
ENSMUST00000139610 (Pdcd2-003) 15522703-15527084 retained_intron
ENSMUST00000154293 (Pdcd2-002) 15519208-15527281 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018G_0001ENSG00000008018ENST00000262193ENST00000462957ENSG00000112592ENST00000230354ENST00000392092ENST00000421512ENST00000423353ENST00000446829ENST00000540980ENST00000616883CIL_00018G_0002ENSMUSG00000014767ENSMUST00000014911ENSMUST00000117593ENSMUST00000118001ENSMUST00000119879ENSMUST00000143924ENSMUST00000147081ENSMUST00000149518ENSMUST00000153480ENSMUST00000155051ENSMUST00000159197ENSMUST00000162505ENSMUSG00000014769ENSMUST00000014913ENSMUSG00000014771ENSMUST00000054450ENSMUST00000125709ENSMUST00000137233ENSMUST00000139610ENSMUST00000154293
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018G_0001ENSG00000008018ENST00000262193ENST00000462957ENSG00000112592ENST00000230354ENST00000392092ENST00000421512ENST00000423353ENST00000446829ENST00000540980ENST00000616883CIL_00018G_0002ENSMUSG00000014767ENSMUST00000014911ENSMUST00000118001ENSMUST00000119879ENSMUST00000143924ENSMUST00000147081ENSMUST00000162505ENSMUSG00000014769ENSMUST00000014913ENSMUSG00000014771ENSMUST00000054450ENSMUST00000125709ENSMUST00000137233
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008018 ENST00000262193 113.902±0.00 129.164±0.00 17.508±0.00 60.830±15.84 67.433±49.66 38.538±5.93 39.406±25.94 75.716±35.49 66.090±39.26 58.744±39.25 63.808±18.36 179.620±103.66 148.588±11.78 63.215±1.01
ENST00000462957 N/A N/A 1.583±0.00 N/A 2.433±0.00 N/A N/A N/A N/A 3.971±0.00 N/A N/A N/A N/A
ENSG00000112592 ENST00000230354 0.958±0.00 1.955±0.00 0.414±0.00 0.986±0.67 N/A N/A 0.110±0.00 0.301±0.00 1.869±0.00 N/A N/A 2.835±0.14 2.412±1.56 5.049±0.00
ENST00000392092 N/A N/A N/A N/A 1.334±0.00 1.231±0.00 N/A N/A N/A 1.292±0.00 N/A 2.242±0.51 2.192±0.00 N/A
ENST00000421512 N/A N/A 0.558±0.00 0.917±0.00 N/A N/A 0.326±0.00 N/A 0.908±0.00 0.853±0.20 N/A 5.020±0.00 N/A N/A
ENST00000423353 N/A N/A N/A N/A N/A N/A 0.675±0.00 N/A N/A N/A 0.905±0.00 N/A N/A N/A
ENST00000446829 N/A N/A N/A N/A N/A N/A N/A 1.053±0.00 1.015±0.00 N/A N/A N/A N/A N/A
ENST00000540980 N/A 1.781±0.00 N/A N/A 0.584±0.00 0.681±0.00 N/A 0.608±0.00 N/A N/A 1.048±0.26 N/A 0.943±0.00 N/A
ENST00000616883 1.805±0.00 N/A N/A 1.193±0.30 1.204±0.51 1.188±0.45 2.255±0.00 3.974±0.00 1.716±0.00 1.086±0.00 N/A 6.552±4.41 2.312±0.99 20.601±8.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014767 ENSMUST00000014911 2.304±0.67 N/A 2.842±0.30 10.826±1.67 2.535±0.00 N/A 1.753±0.37 2.399±0.00 5.607±1.50 3.568±0.14 2.129±0.40 6.395±0.40 5.555±1.41 21.276±1.19
ENSMUST00000117593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118001 4.081±1.93 10.292±2.15 6.756±0.33 8.088±1.44 5.637±0.42 7.864±1.17 2.121±0.89 6.776±0.77 7.577±3.19 8.026±0.43 0.975±0.00 9.342±1.88 7.297±2.68 18.047±1.68
ENSMUST00000119879 4.972±1.52 8.261±0.00 N/A 8.287±0.00 7.391±0.63 11.859±0.00 3.474±0.15 6.380±0.99 6.244±0.00 7.113±0.37 N/A 14.431±2.64 19.086±3.98 31.792±4.21
ENSMUST00000143924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.522±4.32
ENSMUST00000147081 N/A N/A N/A N/A N/A N/A N/A N/A 5.294±0.00 N/A N/A N/A N/A 26.283±0.00
ENSMUST00000149518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162505 N/A N/A 0.564±0.00 0.742±0.43 N/A N/A 0.186±0.03 N/A 0.484±0.13 N/A 0.158±0.04 0.351±0.00 0.425±0.02 N/A
ENSMUSG00000014769 ENSMUST00000014913 100.891±20.58 41.148±9.11 56.727±2.28 77.638±42.25 81.931±22.65 96.808±38.19 64.926±30.54 91.043±25.85 94.261±34.24 60.212±27.70 62.146±11.21 82.228±25.22 128.170±42.97 48.450±15.30
ENSMUSG00000014771 ENSMUST00000054450 10.960±3.02 40.553±12.41 10.305±0.04 15.281±2.79 22.987±7.30 25.655±4.09 4.425±1.52 14.370±2.69 12.734±2.68 14.173±2.17 6.034±1.60 38.052±10.54 10.722±2.73 N/A
ENSMUST00000125709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.053±0.00 N/A
ENSMUST00000137233 N/A N/A N/A 11.868±0.00 21.177±0.00 N/A N/A N/A N/A N/A N/A 19.239±0.00 26.299±12.61 N/A
ENSMUST00000139610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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