C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119938-ENSG00000107854 CGP 9606 10:91628442-91865276
GeneTranscriptPositionBiotype
ENSG00000107854 (TNKS2)
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 		ENST00000371627 (TNKS2-001) 91798312-91865276 protein_coding
ENSG00000119938 (PPP1R3C)
protein phosphatase 1, regulatory subunit 3C 		ENST00000238994 (PPP1R3C-001) 91628442-91633054 protein_coding
ENSG00000180581 (SRP9P1)
signal recognition particle 9 pseudogene 1 		ENST00000445874 (SRP9P1-001) 91807179-91807439 processed_pseudogene
ENSG00000213449 (GAPDHP28)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 28 		ENST00000455134 (GAPDHP28-001) 91666780-91667782 processed_pseudogene
ENSG00000228701 (TNKS2-AS1)
TNKS2 antisense RNA 1 (head to head) 		ENST00000432246 (TNKS2-AS1-002) 91782936-91798196 antisense
ENST00000432938 (TNKS2-AS1-001) 91782839-91798291 antisense
ENSG00000228759 (FAF2P1)
Fas associated factor family member 2 pseudogene 1 		ENST00000429974 (FAF2P1-001) 91765899-91767196 processed_pseudogene
CIL_00018M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067279-ENSMUSG00000024811 CGP 10090 19:36731737-36893477
GeneTranscriptPositionBiotype
ENSMUSG00000024811 (Tnks2)
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 		ENSMUST00000025729 (Tnks2-001) 36834232-36893477 protein_coding
ENSMUST00000164665 (Tnks2-008) 36871751-36884086 protein_coding
ENSMUST00000166677 (Tnks2-003) 36878507-36883081 retained_intron
ENSMUST00000167533 (Tnks2-005) 36857498-36862320 retained_intron
ENSMUST00000167724 (Tnks2-006) 36857881-36872463 protein_coding
ENSMUST00000168654 (Tnks2-009) 36880573-36887373 retained_intron
ENSMUST00000168656 (Tnks2-002) 36834404-36855937 processed_transcript
ENSMUST00000168718 (Tnks2-007) 36859094-36866303 protein_coding
ENSMUST00000168973 (Tnks2-004) 36849371-36855012 retained_intron
ENSMUSG00000067279 (Ppp1r3c)
protein phosphatase 1, regulatory (inhibitor) subunit 3C 		ENSMUST00000087321 (Ppp1r3c-201) 36731737-36736653 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018M_0001ENSG00000107854ENST00000371627ENSG00000119938ENST00000238994ENSG00000180581ENST00000445874ENSG00000213449ENST00000455134ENSG00000228701ENST00000432246ENST00000432938ENSG00000228759ENST00000429974CIL_00018M_0002ENSMUSG00000024811ENSMUST00000025729ENSMUST00000164665ENSMUST00000166677ENSMUST00000167533ENSMUST00000167724ENSMUST00000168654ENSMUST00000168656ENSMUST00000168718ENSMUST00000168973ENSMUSG00000067279ENSMUST00000087321
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018M_0001ENSG00000107854ENST00000371627ENSG00000119938ENST00000238994ENSG00000180581ENST00000445874ENSG00000213449ENST00000455134ENSG00000228701ENST00000432246ENST00000432938ENSG00000228759ENST00000429974CIL_00018M_0002ENSMUSG00000024811ENSMUST00000025729ENSMUSG00000067279ENSMUST00000087321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107854 ENST00000371627 8.093±0.00 6.153±0.00 0.394±0.00 5.530±2.34 4.395±0.55 5.116±1.88 2.828±1.14 3.736±0.35 4.388±1.10 7.138±1.52 4.966±0.77 7.454±3.00 8.608±3.02 6.422±2.23
ENSG00000119938 ENST00000238994 1.028±0.00 1.598±0.00 2.598±0.00 8.259±2.43 6.576±3.54 3.467±2.44 14.053±5.56 11.534±3.48 13.811±1.00 4.590±1.02 36.352±0.25 4.922±4.89 3.854±1.58 5.819±4.90
ENSG00000180581 ENST00000445874 N/A N/A N/A N/A 0.338±0.00 N/A 0.460±0.00 N/A N/A N/A 1.513±1.13 10.769±0.00 N/A N/A
ENSG00000213449 ENST00000455134 N/A 0.031±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.014±0.00 0.076±0.00 N/A N/A 0.056±0.00
ENSG00000228701 ENST00000432246 N/A N/A N/A N/A 0.285±0.19 N/A 0.145±0.00 0.134±0.00 0.417±0.00 0.036±0.00 0.146±0.00 0.273±0.08 0.349±0.14 3.316±1.77
ENST00000432938 0.042±0.00 1.291±0.00 N/A 0.698±0.00 0.116±0.00 N/A 0.095±0.00 1.612±0.00 N/A N/A 0.554±0.00 0.244±0.00 0.306±0.23 3.243±0.00
ENSG00000228759 ENST00000429974 N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024811 ENSMUST00000025729 12.305±3.88 7.044±1.33 22.174±1.03 22.466±6.62 11.900±0.71 5.827±1.95 7.566±1.20 9.797±2.67 9.564±5.14 15.575±0.94 21.214±2.74 14.032±7.19 29.429±7.22 3.842±0.79
ENSMUST00000164665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067279 ENSMUST00000087321 11.533±1.00 6.911±1.56 5.507±0.46 4.224±2.68 24.533±6.11 4.432±0.42 30.494±4.88 2.755±0.39 20.291±15.16 7.955±0.68 125.501±62.18 3.236±1.28 1.891±0.71 1.054±0.21

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