C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165338-ENSG00000119938 CGP 9606 10:91410285-91633054
GeneTranscriptPositionBiotype
ENSG00000119938 (PPP1R3C)
protein phosphatase 1, regulatory subunit 3C 		ENST00000238994 (PPP1R3C-001) 91628442-91633054 protein_coding
ENSG00000165338 (HECTD2)
HECT domain containing E3 ubiquitin protein ligase 2 		ENST00000298068 (HECTD2-005) 91410345-91514761 protein_coding
ENST00000371667 (HECTD2-003) 91484108-91514829 protein_coding
ENST00000371681 (HECTD2-001) 91410344-91463664 protein_coding
ENST00000446394 (HECTD2-201) 91410285-91514826 protein_coding
ENST00000498446 (HECTD2-002) 91484090-91489981 processed_transcript
ENSG00000223876 (RPS27P1)
ribosomal protein S27 pseudogene 1 		ENST00000450552 (RPS27P1-001) 91544852-91545098 processed_pseudogene
ENSG00000271385 (RP11-108M11.3)
 ENST00000604630 (RP11-108M11.3-001) 91464578-91464708 processed_pseudogene
CIL_00018N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041180-ENSMUSG00000067279 CGP 10090 19:36554639-36736653
GeneTranscriptPositionBiotype
ENSMUSG00000041180 (Hectd2)
HECT domain containing 2 		ENSMUST00000047247 (Hectd2-001) 36554669-36621135 protein_coding
ENSMUST00000139215 (Hectd2-002) 36554639-36621132 nonsense_mediated_decay
ENSMUST00000141503 (Hectd2-004) 36554678-36597381 retained_intron
ENSMUST00000142404 (Hectd2-007) 36605167-36612398 retained_intron
ENSMUST00000149629 (Hectd2-003) 36554669-36591147 retained_intron
ENSMUST00000155447 (Hectd2-006) 36554835-36569797 retained_intron
ENSMUST00000155594 (Hectd2-005) 36554866-36618844 nonsense_mediated_decay
ENSMUST00000169036 (Hectd2-009) 36554668-36620242 protein_coding
ENSMUST00000177381 (Hectd2-008) 36585489-36618844 nonsense_mediated_decay
ENSMUSG00000067279 (Ppp1r3c)
protein phosphatase 1, regulatory (inhibitor) subunit 3C 		ENSMUST00000087321 (Ppp1r3c-201) 36731737-36736653 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018N_0001ENSG00000119938ENST00000238994ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000223876ENST00000450552ENSG00000271385ENST00000604630CIL_00018N_0002ENSMUSG00000041180ENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155447ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381ENSMUSG00000067279ENSMUST00000087321
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018N_0001ENSG00000119938ENST00000238994ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000223876ENST00000450552ENSG00000271385ENST00000604630CIL_00018N_0002ENSMUSG00000041180ENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381ENSMUSG00000067279ENSMUST00000087321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119938 ENST00000238994 1.028±0.00 1.598±0.00 2.598±0.00 8.259±2.43 6.576±3.54 3.467±2.44 14.053±5.56 11.534±3.48 13.811±1.00 4.590±1.02 36.352±0.25 4.922±4.89 3.854±1.58 5.819±4.90
ENSG00000165338 ENST00000298068 1.008±0.00 0.916±0.00 N/A 1.459±0.76 0.892±0.07 0.931±0.65 0.449±0.06 2.027±0.00 2.786±2.48 0.929±0.03 0.763±0.00 1.765±1.19 0.594±0.06 2.153±0.67
ENST00000371667 N/A N/A 0.138±0.00 0.700±0.00 N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A N/A
ENST00000371681 N/A N/A N/A 0.848±0.00 N/A N/A 0.200±0.00 N/A N/A 0.582±0.00 N/A 0.523±0.27 0.314±0.02 0.819±0.00
ENST00000446394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A
ENST00000498446 N/A N/A 0.197±0.00 N/A N/A 0.320±0.00 0.083±0.00 0.227±0.00 2.365±0.00 0.993±0.00 N/A 0.677±0.00 N/A N/A
ENSG00000223876 ENST00000450552 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A N/A N/A
ENSG00000271385 ENST00000604630 N/A N/A N/A 33.350±0.00 N/A N/A N/A N/A 15.506±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041180 ENSMUST00000047247 N/A 0.170±0.02 N/A N/A N/A 0.199±0.03 N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A
ENSMUST00000139215 N/A N/A N/A N/A 0.308±0.00 N/A N/A 0.102±0.00 N/A N/A N/A 0.289±0.07 N/A N/A
ENSMUST00000141503 N/A 0.390±0.20 N/A N/A 0.524±0.00 0.606±0.20 N/A 0.262±0.04 N/A 0.397±0.00 N/A 0.692±0.12 N/A N/A
ENSMUST00000142404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.038±0.00 N/A N/A
ENSMUST00000149629 0.260±0.02 0.049±0.00 N/A N/A 0.233±0.05 0.148±0.08 N/A 0.052±0.00 N/A 0.087±0.02 N/A 0.284±0.12 N/A N/A
ENSMUST00000155447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155594 N/A N/A N/A N/A 0.601±0.00 N/A N/A 0.095±0.00 N/A N/A N/A N/A 0.230±0.10 1.533±0.00
ENSMUST00000169036 1.188±0.13 0.131±0.06 0.858±0.00 2.987±1.34 0.555±0.16 0.276±0.06 N/A 0.127±0.04 0.250±0.09 0.215±0.13 0.952±0.23 0.521±0.26 0.335±0.17 5.110±2.15
ENSMUST00000177381 N/A N/A N/A 2.704±0.00 N/A N/A N/A 0.198±0.00 N/A 0.255±0.00 N/A 0.491±0.13 0.279±0.12 2.580±0.00
ENSMUSG00000067279 ENSMUST00000087321 11.533±1.00 6.911±1.56 5.507±0.46 4.224±2.68 24.533±6.11 4.432±0.42 30.494±4.88 2.755±0.39 20.291±15.16 7.955±0.68 125.501±62.18 3.236±1.28 1.891±0.71 1.054±0.21

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