C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107864-ENSG00000198060 CGP 9606 10:92046692-92353964
GeneTranscriptPositionBiotype
ENSG00000105988 (NHP2P1)
NHP2 ribonucleoprotein pseudogene 1 		ENST00000335274 (NHP2P1-001) 92216332-92216793 processed_pseudogene
ENSG00000107864 (CPEB3)
cytoplasmic polyadenylation element binding protein 3 		ENST00000265997 (CPEB3-002) 92049631-92291087 protein_coding
ENST00000412050 (CPEB3-001) 92046692-92243246 protein_coding
ENST00000614585 (CPEB3-201) 92048642-92243279 protein_coding
ENSG00000198060 (MARCH5)
membrane-associated ring finger (C3HC4) 5 		ENST00000358935 (MARCH5-001) 92291163-92353964 protein_coding
ENST00000462465 (MARCH5-003) 92333507-92349423 processed_transcript
ENST00000467521 (MARCH5-002) 92308478-92349775 processed_transcript
ENST00000492319 (MARCH5-004) 92349481-92350298 processed_transcript
ENSG00000199881 (Y_RNA)
Y RNA 		ENST00000363011 (Y_RNA.1-284) 92272147-92272250 misc_RNA
ENSG00000213484 (EIF4A1P8)
eukaryotic translation initiation factor 4A1 pseudogene 8 		ENST00000394444 (EIF4A1P8-001) 92136875-92138370 processed_pseudogene
ENSG00000214549 (SDHCP2)
succinate dehydrogenase complex, subunit C pseudogene 2 		ENST00000398565 (SDHCP2-001) 92118664-92119164 processed_pseudogene
ENSG00000252993 (SNORA25)
Small nucleolar RNA SNORA25 		ENST00000517184 (SNORA25.1-218) 92076242-92076365 snoRNA
ENSG00000264076 (AL158040.1)
 ENST00000583870 (AL158040.1-201) 92159572-92159672 miRNA
CIL_00018Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039652-ENSMUSG00000023307 CGP 10090 19:37021291-37222139
GeneTranscriptPositionBiotype
ENSMUSG00000023307 (March5)
membrane-associated ring finger (C3HC4) 5 		ENSMUST00000024078 (March5-001) 37207543-37222139 protein_coding
ENSMUST00000112391 (March5-003) 37207568-37221076 protein_coding
ENSMUST00000128530 (March5-004) 37217190-37221977 protein_coding
ENSMUST00000148105 (March5-002) 37207576-37217641 retained_intron
ENSMUSG00000039652 (Cpeb3)
cytoplasmic polyadenylation element binding protein 3 		ENSMUST00000079754 (Cpeb3-001) 37021291-37207462 protein_coding
ENSMUST00000123727 (Cpeb3-006) 37024639-37198109 protein_coding
ENSMUST00000124158 (Cpeb3-008) 37021297-37174095 protein_coding
ENSMUST00000126188 (Cpeb3-003) 37022970-37207473 protein_coding
ENSMUST00000126781 (Cpeb3-002) 37054062-37207508 protein_coding
ENSMUST00000128642 (Cpeb3-012) 37174688-37175216 protein_coding
ENSMUST00000131917 (Cpeb3-009) 37174623-37208601 protein_coding
ENSMUST00000132580 (Cpeb3-004) 37023935-37207293 protein_coding
ENSMUST00000133988 (Cpeb3-010) 37174437-37178017 protein_coding
ENSMUST00000136286 (Cpeb3-007) 37021879-37207462 protein_coding
ENSMUST00000142973 (Cpeb3-011) 37174593-37176056 protein_coding
ENSMUST00000154376 (Cpeb3-005) 37021879-37176063 protein_coding
ENSMUSG00000097591 (A330032B11Rik)
RIKEN cDNA A330032B11 gene 		ENSMUST00000180609 (A330032B11Rik-201) 37173843-37196541 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018Q_0001ENSG00000105988ENST00000335274ENSG00000107864ENST00000265997ENST00000412050ENST00000614585ENSG00000198060ENST00000358935ENST00000462465ENST00000467521ENST00000492319ENSG00000199881ENST00000363011ENSG00000213484ENST00000394444ENSG00000214549ENST00000398565ENSG00000252993ENST00000517184ENSG00000264076ENST00000583870CIL_00018Q_0002ENSMUSG00000023307ENSMUST00000024078ENSMUST00000112391ENSMUST00000128530ENSMUST00000148105ENSMUSG00000039652ENSMUST00000079754ENSMUST00000123727ENSMUST00000124158ENSMUST00000126188ENSMUST00000126781ENSMUST00000128642ENSMUST00000131917ENSMUST00000132580ENSMUST00000133988ENSMUST00000136286ENSMUST00000142973ENSMUST00000154376ENSMUSG00000097591ENSMUST00000180609
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018Q_0001ENSG00000105988ENST00000335274ENSG00000107864ENST00000265997ENST00000412050ENST00000614585ENSG00000198060ENST00000358935ENST00000467521ENST00000492319ENSG00000199881ENST00000363011ENSG00000213484ENST00000394444ENSG00000214549ENST00000398565ENSG00000252993ENST00000517184ENSG00000264076ENST00000583870CIL_00018Q_0002ENSMUSG00000023307ENSMUST00000024078ENSMUST00000112391ENSMUST00000128530ENSMUST00000148105ENSMUSG00000039652ENSMUST00000079754ENSMUST00000123727ENSMUST00000124158ENSMUST00000126188ENSMUST00000126781ENSMUST00000132580ENSMUST00000136286ENSMUST00000154376ENSMUSG00000097591ENSMUST00000180609
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105988 ENST00000335274 0.048±0.00 0.051±0.00 N/A N/A N/A 0.050±0.00 0.154±0.00 0.055±0.00 0.180±0.08 N/A 0.142±0.00 0.219±0.04 0.172±0.00 0.068±0.02
ENSG00000107864 ENST00000265997 0.113±0.00 N/A N/A 1.236±0.00 N/A 0.558±0.00 0.550±0.00 N/A 0.579±0.00 0.141±0.00 1.143±0.00 0.332±0.00 N/A 3.164±1.95
ENST00000412050 N/A N/A 0.179±0.00 5.486±0.00 0.220±0.05 N/A N/A 0.414±0.00 0.426±0.00 N/A N/A 0.130±0.00 0.080±0.03 1.228±0.78
ENST00000614585 0.640±0.00 0.385±0.00 1.596±0.00 N/A 1.293±0.37 0.684±0.20 1.655±0.56 2.989±1.22 2.666±1.58 0.973±0.01 0.898±0.00 0.747±0.36 0.319±0.05 2.019±0.00
ENSG00000198060 ENST00000358935 5.500±0.00 5.847±0.00 0.715±0.00 4.333±2.59 6.101±0.00 2.205±1.43 2.554±2.08 3.272±2.88 3.553±0.00 3.067±0.00 2.554±1.53 6.256±2.10 3.901±0.88 6.533±0.25
ENST00000462465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467521 6.204±0.00 N/A 2.404±0.00 2.700±0.00 7.629±0.00 4.255±0.24 N/A 12.392±0.00 N/A N/A N/A 8.784±0.00 3.943±1.14 8.753±0.82
ENST00000492319 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.363±0.00 1.844±0.00 N/A N/A N/A
ENSG00000199881 ENST00000363011 N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213484 ENST00000394444 N/A 0.044±0.00 0.047±0.00 0.153±0.07 0.022±0.00 0.072±0.06 N/A 0.429±0.35 0.043±0.00 0.070±0.00 N/A 0.080±0.08 N/A N/A
ENSG00000214549 ENST00000398565 N/A 0.034±0.00 0.212±0.00 0.815±0.74 0.108±0.00 0.033±0.00 0.107±0.00 N/A N/A N/A N/A 0.056±0.00 N/A N/A
ENSG00000252993 ENST00000517184 N/A N/A N/A 0.304±0.00 N/A N/A N/A 12.962±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000264076 ENST00000583870 N/A N/A N/A 279.276±0.00 N/A N/A N/A N/A N/A 78.494±0.00 N/A 1.932±0.00 2.639±0.00 0.601±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023307 ENSMUST00000024078 28.008±9.19 30.494±14.75 27.048±0.26 29.237±13.07 34.049±9.50 13.210±10.53 18.704±5.00 26.614±3.43 41.084±18.40 20.204±2.84 31.056±1.38 29.916±14.39 20.462±7.30 13.721±5.80
ENSMUST00000112391 N/A N/A N/A N/A 5.247±0.00 N/A N/A 5.414±0.00 5.536±0.05 5.456±0.45 N/A N/A N/A 4.838±0.91
ENSMUST00000128530 9.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.451±0.90 8.163±0.05 N/A
ENSMUST00000148105 N/A 102.704±67.75 N/A N/A 39.758±6.68 18.087±0.00 N/A N/A N/A 11.432±0.00 N/A 19.105±7.49 4.991±0.00 3.220±0.00
ENSMUSG00000039652 ENSMUST00000079754 N/A N/A 0.545±0.20 1.640±0.00 N/A N/A N/A N/A 0.708±0.18 N/A 1.792±0.20 N/A 0.245±0.06 N/A
ENSMUST00000123727 N/A 2.546±0.00 0.675±0.10 N/A N/A 0.704±0.23 N/A N/A 0.617±0.24 1.995±0.00 N/A 0.875±0.00 N/A 14.156±3.39
ENSMUST00000124158 0.589±0.14 N/A 0.979±0.05 N/A 1.287±0.00 0.615±0.00 4.359±0.74 4.267±2.37 0.487±0.12 0.803±0.10 6.791±1.63 1.448±0.85 0.245±0.03 0.500±0.00
ENSMUST00000126188 2.831±1.25 1.498±0.00 0.414±0.00 1.407±0.00 3.417±0.38 0.347±0.13 7.870±0.66 3.912±0.84 0.551±0.19 1.539±0.24 N/A 1.091±0.25 0.157±0.02 N/A
ENSMUST00000126781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.087±5.83
ENSMUST00000128642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132580 N/A 2.830±0.13 N/A N/A 0.869±0.00 0.554±0.19 N/A N/A 0.336±0.03 0.649±0.00 N/A 3.280±0.91 0.481±0.00 4.086±0.00
ENSMUST00000133988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136286 0.550±0.06 N/A N/A N/A 0.890±0.00 0.703±0.18 N/A 1.050±0.00 0.988±0.43 1.127±0.68 N/A N/A 0.194±0.00 N/A
ENSMUST00000142973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154376 N/A N/A N/A N/A N/A 0.528±0.00 N/A N/A 0.371±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097591 ENSMUST00000180609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.01 N/A

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