C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151553-ENSG00000165832 CGP 9606 10:114821744-114977676
GeneTranscriptPositionBiotype
ENSG00000165832 (TRUB1)
TruB pseudouridine (psi) synthase family member 1 		ENST00000298746 (TRUB1-001) 114938193-114977676 protein_coding
ENST00000485065 (TRUB1-002) 114938386-114960000 processed_transcript
ENSG00000226428 (RP11-106M7.4)
 ENST00000414329 (RP11-106M7.4-001) 114900722-114901366 processed_pseudogene
ENSG00000252611 (RNU6-1121P)
RNA, U6 small nuclear 1121, pseudogene 		ENST00000516802 (RNU6-1121P-201) 114969460-114969568 snRNA
CIL_00019G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033478-ENSMUSG00000025086 CGP 10090 19:57361009-57491005
GeneTranscriptPositionBiotype
ENSMUSG00000025086 (Trub1)
TruB pseudouridine (psi) synthase homolog 1 (E. coli) 		ENSMUST00000026072 (Trub1-201) 57452906-57488910 protein_coding
ENSMUST00000026073 (Trub1-202) 57452906-57491005 protein_coding
ENSMUSG00000033478 (Fam160b1)
family with sequence similarity 160, member B1 		ENSMUST00000036407 (Fam160b1-201) 57361009-57389594 protein_coding
ENSMUSG00000097374 (Gm26874)
predicted gene, 26874 		ENSMUST00000181959 (Gm26874-201) 57459572-57461553 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019G_0001ENSG00000165832ENST00000298746ENST00000485065ENSG00000226428ENST00000414329ENSG00000252611ENST00000516802CIL_00019G_0002ENSMUSG00000025086ENSMUST00000026072ENSMUST00000026073ENSMUSG00000033478ENSMUST00000036407ENSMUSG00000097374ENSMUST00000181959
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019G_0001ENSG00000165832ENST00000298746ENST00000485065ENSG00000226428ENST00000414329ENSG00000252611ENST00000516802CIL_00019G_0002ENSMUSG00000025086ENSMUST00000026072ENSMUST00000026073ENSMUSG00000033478ENSMUST00000036407ENSMUSG00000097374ENSMUST00000181959
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165832 ENST00000298746 1.317±0.00 2.673±0.00 1.560±0.00 7.686±1.77 2.386±0.86 2.342±0.38 3.100±0.17 3.765±1.50 2.705±0.56 1.698±0.74 1.169±0.00 4.945±0.99 1.737±0.16 8.041±1.27
ENST00000485065 N/A N/A 2.188±0.00 N/A N/A N/A N/A 2.922±0.00 N/A N/A N/A 13.290±0.00 6.238±0.00 12.043±0.00
ENSG00000226428 ENST00000414329 N/A 0.237±0.00 N/A N/A 0.093±0.00 0.028±0.00 0.027±0.00 0.152±0.00 0.026±0.00 0.084±0.00 0.205±0.00 0.072±0.00 N/A N/A
ENSG00000252611 ENST00000516802 N/A 0.332±0.00 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025086 ENSMUST00000026072 1.916±0.60 2.032±0.39 3.936±0.64 3.259±0.66 1.630±0.47 0.961±0.29 0.646±0.09 0.750±0.13 1.713±0.75 1.176±0.05 1.237±0.11 2.498±1.01 1.710±0.43 0.505±0.06
ENSMUST00000026073 2.542±0.80 5.976±0.88 2.447±0.32 3.211±0.87 2.335±1.03 1.840±0.40 0.955±0.06 2.634±0.29 3.062±0.41 1.342±0.13 0.934±0.20 3.578±1.27 1.835±0.60 0.518±0.19
ENSMUSG00000033478 ENSMUST00000036407 4.961±1.31 7.434±1.15 5.716±1.71 3.033±0.62 5.222±1.09 5.461±0.51 2.956±0.72 3.396±0.87 5.340±1.57 7.584±1.75 2.942±0.57 6.951±2.93 6.038±2.18 6.834±1.95
ENSMUSG00000097374 ENSMUST00000181959 0.138±0.10 0.095±0.05 0.021±0.01 0.029±0.01 0.082±0.05 0.042±0.01 0.015±0.00 0.053±0.02 0.060±0.05 0.112±0.05 N/A 0.125±0.09 0.010±0.01 0.048±0.03

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