C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176155-ENSG00000141526 CGP 9606 17:82101460-82261129
GeneTranscriptPositionBiotype
ENSG00000176155 (CCDC57)
coiled-coil domain containing 57 		ENST00000327026 (CCDC57-003) 82153610-82185172 processed_transcript
ENST00000389641 (CCDC57-001) 82101470-82212813 protein_coding
ENST00000392343 (CCDC57-002) 82157448-82212813 protein_coding
ENST00000392345 (CCDC57-008) 82101690-82128556 protein_coding
ENST00000392346 (CCDC57-004) 82111986-82152299 protein_coding
ENST00000392347 (CCDC57-201) 82101470-82212813 protein_coding
ENST00000419322 (CCDC57-005) 82111986-82171732 protein_coding
ENST00000475635 (CCDC57-006) 82155917-82156940 processed_transcript
ENST00000483145 (CCDC57-007) 82127705-82134343 processed_transcript
ENST00000577530 (CCDC57-017) 82163217-82175664 processed_transcript
ENST00000578187 (CCDC57-011) 82188224-82194255 retained_intron
ENST00000578910 (CCDC57-009) 82188225-82198428 retained_intron
ENST00000581625 (CCDC57-010) 82188350-82198422 nonsense_mediated_decay
ENST00000582040 (CCDC57-018) 82135112-82151606 processed_transcript
ENST00000582100 (CCDC57-013) 82104795-82106587 processed_transcript
ENST00000582885 (CCDC57-016) 82207563-82212830 processed_transcript
ENST00000583053 (CCDC57-015) 82101470-82101850 protein_coding
ENST00000583593 (CCDC57-012) 82101752-82127818 nonsense_mediated_decay
ENST00000584717 (CCDC57-014) 82101460-82106375 processed_transcript
ENSG00000264548 (RP13-516M14.2)
 ENST00000581303 (RP13-516M14.2-001) 82214227-82217352 antisense
ENSG00000266654 (RP11-1376P16.1)
 ENST00000582774 (RP11-1376P16.1-001) 82160056-82160452 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00019I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048445-ENSMUSG00000025161 CGP 10090 11:120826529-120960868
GeneTranscriptPositionBiotype
ENSMUSG00000025161 (Slc16a3)
solute carrier family 16 (monocarboxylic acid transporters), member 3 		ENSMUST00000070653 (Slc16a3-001) 120948480-120958775 protein_coding
ENSMUST00000100130 (Slc16a3-201) 120949067-120959000 protein_coding
ENSMUST00000129473 (Slc16a3-005) 120949071-120956861 protein_coding
ENSMUST00000133029 (Slc16a3-003) 120950688-120955273 protein_coding
ENSMUST00000134540 (Slc16a3-004) 120955226-120956231 retained_intron
ENSMUST00000140467 (Slc16a3-006) 120951138-120954212 processed_transcript
ENSMUST00000154187 (Slc16a3-002) 120949053-120956747 protein_coding
ENSMUST00000168579 (Slc16a3-202) 120949081-120960868 protein_coding
ENSMUSG00000048445 (Ccdc57)
coiled-coil domain containing 57 		ENSMUST00000056781 (Ccdc57-001) 120826529-120932872 protein_coding
ENSMUST00000143895 (Ccdc57-003) 120873792-120885911 processed_transcript
ENSMUST00000150640 (Ccdc57-002) 120826542-120873671 processed_transcript
ENSMUSG00000087638 (Gm11773)
predicted gene 11773 		ENSMUST00000138256 (Gm11773-001) 120831029-120834244 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019I_0001ENSG00000176155ENST00000327026ENST00000389641ENST00000392343ENST00000392345ENST00000392346ENST00000392347ENST00000419322ENST00000475635ENST00000483145ENST00000577530ENST00000578187ENST00000578910ENST00000581625ENST00000582040ENST00000582100ENST00000582885ENST00000583053ENST00000583593ENST00000584717ENSG00000264548ENST00000581303ENSG00000266654ENST00000582774CIL_00019I_0002ENSMUSG00000025161ENSMUST00000070653ENSMUST00000100130ENSMUST00000129473ENSMUST00000133029ENSMUST00000134540ENSMUST00000140467ENSMUST00000154187ENSMUST00000168579ENSMUSG00000048445ENSMUST00000056781ENSMUST00000143895ENSMUST00000150640ENSMUSG00000087638ENSMUST00000138256
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019I_0001ENSG00000176155ENST00000327026ENST00000389641ENST00000392343ENST00000392346ENST00000392347ENST00000419322ENST00000578910ENST00000584717ENSG00000264548ENST00000581303ENSG00000266654ENST00000582774CIL_00019I_0002ENSMUSG00000025161ENSMUST00000070653ENSMUST00000100130ENSMUST00000129473ENSMUST00000154187ENSMUST00000168579ENSMUSG00000048445ENSMUST00000056781ENSMUST00000150640ENSMUSG00000087638ENSMUST00000138256
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176155 ENST00000327026 0.318±0.00 1.871±0.00 N/A N/A 0.754±0.00 N/A 0.308±0.00 0.803±0.32 0.361±0.00 N/A 0.159±0.00 2.477±0.00 0.841±0.16 5.957±0.00
ENST00000389641 0.436±0.00 N/A 0.745±0.00 0.890±0.00 N/A 0.481±0.00 0.268±0.00 N/A N/A 0.890±0.00 0.356±0.00 N/A N/A 1.001±0.00
ENST00000392343 N/A N/A N/A N/A 0.961±0.00 N/A N/A N/A N/A 0.682±0.00 N/A 0.894±0.00 N/A N/A
ENST00000392345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392346 0.448±0.00 1.845±0.00 N/A 0.752±0.00 1.098±0.00 0.345±0.00 0.212±0.00 N/A 0.507±0.00 N/A N/A N/A N/A N/A
ENST00000392347 0.436±0.00 N/A 0.745±0.00 0.890±0.00 N/A 0.481±0.00 0.268±0.00 N/A N/A 0.890±0.00 0.356±0.00 N/A N/A 1.001±0.00
ENST00000419322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.850±0.00
ENST00000475635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578910 N/A N/A 4.486±0.00 N/A N/A N/A N/A N/A N/A 3.913±0.00 N/A N/A N/A N/A
ENST00000581625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584717 3.640±0.00 18.688±0.00 N/A N/A 12.331±0.00 4.249±0.00 N/A N/A 6.773±0.00 7.351±0.00 2.423±0.00 N/A 23.390±1.36 8.146±0.00
ENSG00000264548 ENST00000581303 0.083±0.00 0.662±0.00 N/A 0.458±0.00 0.054±0.00 N/A 0.028±0.00 0.258±0.00 0.117±0.00 0.070±0.06 0.043±0.00 0.182±0.15 0.052±0.01 0.222±0.00
ENSG00000266654 ENST00000582774 0.084±0.00 0.600±0.00 N/A 0.047±0.00 N/A 0.128±0.00 0.085±0.00 0.311±0.12 N/A 0.239±0.00 0.497±0.00 0.140±0.09 N/A 0.515±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025161 ENSMUST00000070653 1.813±1.19 0.216±0.04 4.234±0.27 0.822±0.42 3.029±3.12 2.938±1.10 0.146±0.00 0.230±0.01 10.271±6.23 4.809±0.63 67.186±40.55 5.071±1.79 50.643±43.63 N/A
ENSMUST00000100130 0.562±0.03 N/A 1.565±0.43 0.498±0.12 0.883±0.00 0.996±0.10 0.338±0.08 0.272±0.05 3.217±0.20 N/A 22.660±0.00 1.024±0.46 5.016±0.00 0.584±0.00
ENSMUST00000129473 4.016±0.00 0.844±0.39 N/A 0.779±0.00 3.186±3.56 4.454±1.88 1.026±0.02 0.620±0.00 0.180±0.02 7.274±0.56 N/A 8.829±2.14 N/A N/A
ENSMUST00000133029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154187 0.529±0.00 0.488±0.16 3.428±0.41 0.977±0.28 7.698±1.72 4.010±2.49 0.714±0.16 0.606±0.14 8.791±6.63 N/A 62.687±10.26 7.082±2.42 18.437±6.95 N/A
ENSMUST00000168579 0.271±0.10 0.093±0.02 N/A 0.130±0.03 0.164±0.01 0.438±0.05 0.117±0.04 0.088±0.01 0.070±0.02 N/A N/A 0.977±0.16 N/A N/A
ENSMUSG00000048445 ENSMUST00000056781 0.689±0.42 0.803±0.34 1.378±0.18 2.544±0.95 0.360±0.06 0.447±0.19 0.250±0.03 0.993±0.22 0.757±0.47 0.785±0.15 1.201±0.23 2.991±2.11 1.333±0.57 4.250±1.18
ENSMUST00000143895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.033±0.00 N/A 11.861±2.79
ENSMUSG00000087638 ENSMUST00000138256 0.378±0.22 0.316±0.09 0.058±0.03 N/A 0.417±0.17 0.175±0.00 0.170±0.00 N/A 0.332±0.25 0.216±0.14 0.210±0.00 0.268±0.11 N/A 0.245±0.00

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