C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000098029-ENSDARG00000004452 CGP 7955 23:29576743-29605737
GeneTranscriptPositionBiotype
ENSDARG00000004452 (tardbpl)
TAR DNA binding protein, like 		ENSDART00000027255 (tardbpl-002) 29600844-29605425 nonsense_mediated_decay
ENSDART00000126681 (tardbpl-001) 29600682-29605737 nonsense_mediated_decay
ENSDART00000139223 (tardbpl-003) 29600682-29603757 protein_coding
ENSDART00000141928 (tardbpl-004) 29600682-29604510 protein_coding
ENSDARG00000098029 (C23H1orf127)
chromosome 1 open reading frame 127 		ENSDART00000156512 (C23H1orf127-001) 29576743-29600656 protein_coding
CIL_00019T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175262-ENSG00000120948 CGP 9606 1:10946471-11026420
GeneTranscriptPositionBiotype
ENSG00000120948 (TARDBP)
TAR DNA binding protein 		ENST00000240185 (TARDBP-001) 11012400-11026420 protein_coding
ENST00000315091 (TARDBP-003) 11013716-11024183 protein_coding
ENST00000439080 (TARDBP-011) 11012653-11022858 nonsense_mediated_decay
ENST00000472476 (TARDBP-006) 11012654-11022176 nonsense_mediated_decay
ENST00000473118 (TARDBP-004) 11012344-11020489 protein_coding
ENST00000473869 (TARDBP-002) 11013716-11025019 nonsense_mediated_decay
ENST00000476201 (TARDBP-005) 11012654-11020589 protein_coding
ENST00000477447 (TARDBP-007) 11020587-11025207 nonsense_mediated_decay
ENST00000480464 (TARDBP-009) 11023929-11025492 processed_transcript
ENST00000496840 (TARDBP-008) 11023198-11025739 nonsense_mediated_decay
ENST00000610369 (TARDBP-022) 11018853-11024043 protein_coding
ENST00000611008 (TARDBP-026) 11022818-11025492 processed_transcript
ENST00000611963 (TARDBP-020) 11016966-11024193 nonsense_mediated_decay
ENST00000613177 (TARDBP-027) 11023045-11025203 processed_transcript
ENST00000613864 (TARDBP-014) 11012654-11018453 processed_transcript
ENST00000614494 (TARDBP-023) 11020433-11024183 nonsense_mediated_decay
ENST00000616545 (TARDBP-013) 11013728-11023341 protein_coding
ENST00000617172 (TARDBP-019) 11016865-11023590 protein_coding
ENST00000617757 (TARDBP-028) 11023323-11024152 processed_transcript
ENST00000618606 (TARDBP-015) 11016878-11019186 retained_intron
ENST00000619555 (TARDBP-018) 11018780-11024184 nonsense_mediated_decay
ENST00000620505 (TARDBP-024) 11022308-11025221 nonsense_mediated_decay
ENST00000620632 (TARDBP-021) 11018780-11024043 nonsense_mediated_decay
ENST00000621573 (TARDBP-025) 11022548-11024273 nonsense_mediated_decay
ENST00000621715 (TARDBP-016) 11012670-11022310 protein_coding
ENST00000621790 (TARDBP-012) 11013728-11023341 protein_coding
ENST00000622057 (TARDBP-017) 11016859-11023287 protein_coding
ENSG00000175262 (C1orf127)
chromosome 1 open reading frame 127 		ENST00000377004 (C1orf127-201) 10946473-10982037 protein_coding
ENST00000418570 (C1orf127-001) 10946473-10964201 protein_coding
ENST00000468348 (C1orf127-003) 10946475-10947870 protein_coding
ENST00000476357 (C1orf127-002) 10946471-10949751 retained_intron
ENST00000520253 (C1orf127-004) 10946730-10976215 protein_coding
ENSG00000215785 (CFL1P6)
cofilin 1 (non-muscle) pseudogene 6 		ENST00000400899 (CFL1P6-001) 10990978-10991797 processed_pseudogene
ENSG00000264181 (AL713997.1)
 ENST00000582090 (AL713997.1-201) 10998176-10998263 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019T_0001ENSDARG00000004452ENSDART00000027255ENSDART00000126681ENSDART00000139223ENSDART00000141928ENSDARG00000098029ENSDART00000156512CIL_00019T_0002ENSG00000120948ENST00000240185ENST00000315091ENST00000439080ENST00000472476ENST00000473118ENST00000473869ENST00000476201ENST00000477447ENST00000480464ENST00000496840ENST00000610369ENST00000611008ENST00000611963ENST00000613177ENST00000613864ENST00000614494ENST00000616545ENST00000617172ENST00000617757ENST00000618606ENST00000619555ENST00000620505ENST00000620632ENST00000621573ENST00000621715ENST00000621790ENST00000622057ENSG00000175262ENST00000377004ENST00000418570ENST00000468348ENST00000476357ENST00000520253ENSG00000215785ENST00000400899ENSG00000264181ENST00000582090
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019T_0001ENSDARG00000004452ENSDART00000027255ENSDART00000126681ENSDART00000139223ENSDART00000141928ENSDARG00000098029ENSDART00000156512CIL_00019T_0002ENSG00000120948ENST00000240185ENST00000315091ENST00000439080ENST00000473118ENST00000473869ENST00000611008ENST00000613864ENST00000616545ENST00000617172ENST00000617757ENST00000621573ENST00000621715ENSG00000175262ENST00000377004ENST00000418570ENST00000468348ENST00000476357ENST00000520253ENSG00000215785ENST00000400899ENSG00000264181ENST00000582090
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004452 ENSDART00000027255 N/A N/A N/A 15.553±0.00 N/A N/A 16.507±1.17 8.463±0.00 5.514±0.00 N/A 4.975±0.00 N/A N/A N/A
ENSDART00000126681 N/A N/A N/A 31.423±10.35 N/A N/A 12.457±2.39 14.743±6.55 N/A N/A 9.392±0.00 N/A N/A N/A
ENSDART00000139223 N/A N/A N/A 14.398±0.00 N/A N/A 8.082±0.00 N/A 3.974±0.00 N/A 4.362±0.00 N/A N/A N/A
ENSDART00000141928 N/A N/A N/A 16.946±0.00 N/A N/A N/A N/A N/A N/A 5.533±0.00 N/A N/A N/A
ENSDARG00000098029 ENSDART00000156512 N/A N/A N/A 0.064±0.03 N/A N/A 0.196±0.03 0.330±0.22 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120948 ENST00000240185 N/A N/A 1.520±0.00 1.963±0.56 2.862±0.54 1.741±0.00 0.514±0.00 4.388±0.00 1.089±0.00 3.043±0.00 N/A 4.490±1.56 N/A 6.064±0.00
ENST00000315091 27.214±0.00 32.965±0.00 2.167±0.00 9.024±6.89 23.912±0.00 16.599±13.19 15.673±0.00 29.118±0.00 N/A 15.946±11.17 9.012±6.87 44.512±7.27 28.377±2.51 31.185±6.40
ENST00000439080 23.679±0.00 23.591±0.00 3.250±0.00 16.309±0.00 13.950±0.00 19.037±0.00 15.212±0.00 23.064±0.00 2.501±0.00 16.522±0.00 7.660±5.67 26.597±0.00 22.622±5.65 26.258±0.98
ENST00000472476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473118 N/A N/A 6.391±0.00 N/A N/A N/A N/A N/A 7.989±0.00 N/A N/A 8.703±0.00 N/A N/A
ENST00000473869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.554±0.00 N/A N/A N/A
ENST00000476201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611008 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.388±0.00 N/A N/A N/A N/A
ENST00000611963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613864 N/A N/A N/A 6.847±0.00 N/A 12.893±0.00 5.836±0.00 N/A 7.351±0.00 11.248±0.00 N/A 8.939±0.00 N/A N/A
ENST00000614494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.145±0.00 N/A N/A N/A
ENST00000617172 N/A N/A N/A N/A 13.606±0.00 5.563±0.00 N/A N/A 3.265±0.00 N/A N/A 5.704±0.00 N/A 22.440±0.00
ENST00000617757 N/A N/A N/A N/A N/A 49.632±0.00 N/A N/A N/A N/A N/A 126.848±0.00 102.423±0.00 83.383±0.00
ENST00000618606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621573 16.184±0.00 N/A N/A N/A 12.400±0.00 15.296±0.00 10.874±0.00 21.409±0.00 N/A 12.624±0.00 9.528±0.00 N/A 17.866±0.31 21.012±0.00
ENST00000621715 N/A N/A N/A N/A N/A N/A 2.545±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000621790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175262 ENST00000377004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A
ENST00000418570 N/A N/A N/A 0.036±0.00 0.173±0.00 N/A 0.083±0.00 N/A N/A 0.015±0.00 1.161±0.74 0.198±0.00 0.242±0.00 0.460±0.06
ENST00000468348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.679±0.00 0.221±0.01 N/A
ENST00000476357 0.039±0.00 0.149±0.00 N/A 0.125±0.00 0.142±0.00 0.021±0.00 0.058±0.01 0.055±0.00 0.066±0.00 0.051±0.00 0.472±0.02 0.137±0.12 N/A 0.075±0.00
ENST00000520253 N/A 0.048±0.00 N/A N/A N/A N/A 0.101±0.00 N/A N/A 0.061±0.00 N/A 0.212±0.00 0.149±0.10 N/A
ENSG00000215785 ENST00000400899 N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.306±0.02
ENSG00000264181 ENST00000582090 N/A 0.734±0.00 N/A 0.400±0.00 N/A N/A 1.446±0.00 N/A N/A 1.554±0.00 N/A 38.237±0.00 N/A N/A

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