C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001A3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000097650-ENSDARG00000038099 CGP 7955 17:43050215-43063847
GeneTranscriptPositionBiotype
ENSDARG00000038099 (gskip)
gsk3b interacting protein 		ENSDART00000055541 (gskip-001) 43057958-43063847 protein_coding
ENSDARG00000097650 (ATG2B)
autophagy related 2B 		ENSDART00000155615 (ATG2B-001) 43050215-43057177 protein_coding
CIL_0001A3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000066739-ENSG00000100744 CGP 9606 14:96281258-96387288
GeneTranscriptPositionBiotype
ENSG00000066739 (ATG2B)
autophagy related 2B 		ENST00000261834 (ATG2B-004) 96290136-96311263 processed_transcript
ENST00000359933 (ATG2B-001) 96281258-96363870 protein_coding
ENST00000473234 (ATG2B-003) 96317148-96324178 processed_transcript
ENST00000488421 (ATG2B-002) 96317723-96322435 processed_transcript
ENST00000553643 (ATG2B-005) 96290570-96291938 retained_intron
ENST00000554151 (ATG2B-007) 96292982-96295059 processed_transcript
ENST00000555263 (ATG2B-006) 96289456-96290577 retained_intron
ENSG00000100744 (GSKIP)
GSK3B interacting protein 		ENST00000438650 (GSKIP-201) 96363452-96387286 protein_coding
ENST00000553699 (GSKIP-003) 96363526-96382481 protein_coding
ENST00000554182 (GSKIP-005) 96363526-96385912 protein_coding
ENST00000555088 (GSKIP-004) 96363526-96380292 retained_intron
ENST00000555181 (GSKIP-002) 96363477-96387288 protein_coding
ENST00000555757 (GSKIP-006) 96379702-96385591 protein_coding
ENST00000556095 (GSKIP-001) 96363557-96387286 protein_coding
ENSG00000222276 (RNU2-33P)
RNA, U2 small nuclear 33, pseudogene 		ENST00000410344 (RNU2-33P-201) 96384624-96384815 snRNA
CIL_0001A3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041341-ENSMUSG00000044715 CGP 10090 12:105613539-105703047
GeneTranscriptPositionBiotype
ENSMUSG00000041341 (Atg2b)
autophagy related 2B 		ENSMUST00000041055 (Atg2b-201) 105613539-105685241 protein_coding
ENSMUSG00000044715 (Gskip)
GSK3B interacting protein 		ENSMUST00000051934 (Gskip-201) 105685352-105703047 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A3_0001ENSDARG00000038099ENSDART00000055541ENSDARG00000097650ENSDART00000155615CIL_0001A3_0002ENSG00000066739ENST00000261834ENST00000359933ENST00000473234ENST00000488421ENST00000553643ENST00000554151ENST00000555263ENSG00000100744ENST00000438650ENST00000553699ENST00000554182ENST00000555088ENST00000555181ENST00000555757ENST00000556095ENSG00000222276ENST00000410344CIL_0001A3_0003ENSMUSG00000041341ENSMUST00000041055ENSMUSG00000044715ENSMUST00000051934
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A3_0001ENSDARG00000038099ENSDART00000055541ENSDARG00000097650ENSDART00000155615CIL_0001A3_0002ENSG00000066739ENST00000261834ENST00000359933ENSG00000100744ENST00000438650ENST00000555181ENST00000555757ENST00000556095ENSG00000222276ENST00000410344CIL_0001A3_0003ENSMUSG00000041341ENSMUST00000041055ENSMUSG00000044715ENSMUST00000051934
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038099 ENSDART00000055541 N/A N/A N/A 56.330±24.72 N/A N/A 28.218±4.30 16.740±2.29 2.164±0.00 N/A 10.512±0.00 N/A N/A N/A
ENSDARG00000097650 ENSDART00000155615 N/A N/A N/A 0.840±0.77 N/A N/A 1.041±0.76 1.973±0.00 0.459±0.00 N/A 0.138±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066739 ENST00000261834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.964±0.00 N/A N/A N/A
ENST00000359933 1.285±0.00 0.752±0.00 0.736±0.00 3.695±2.48 1.561±0.53 2.705±1.44 1.225±0.29 1.603±0.06 1.547±0.63 2.224±1.59 1.506±0.23 1.013±0.48 0.657±0.09 4.335±1.58
ENST00000473234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100744 ENST00000438650 N/A N/A N/A N/A N/A 3.192±0.00 N/A N/A 4.308±0.00 1.450±0.00 N/A 3.290±0.00 1.955±0.00 N/A
ENST00000553699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555181 N/A 2.868±0.00 N/A 7.063±0.00 3.373±0.00 5.705±0.00 2.301±0.00 5.973±0.00 1.777±0.00 1.339±0.00 N/A 2.638±0.00 4.000±0.56 6.694±0.00
ENST00000555757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.288±0.00
ENST00000556095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.702±0.06 N/A
ENSG00000222276 ENST00000410344 0.064±0.00 N/A N/A 0.184±0.00 N/A 7.487±0.00 N/A 0.226±0.00 0.049±0.00 N/A N/A N/A 0.413±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041341 ENSMUST00000041055 3.129±2.31 3.403±1.89 3.339±1.18 4.345±2.72 4.046±0.91 2.325±0.54 2.040±0.47 3.604±0.30 2.182±0.69 2.760±0.45 1.744±0.44 4.484±0.85 3.770±1.46 5.180±1.53
ENSMUSG00000044715 ENSMUST00000051934 7.568±0.20 2.639±0.82 7.713±0.30 6.698±0.33 6.220±1.94 3.630±0.93 3.144±0.23 3.446±0.47 3.099±1.57 5.479±0.33 2.792±0.19 5.100±0.77 13.004±4.88 3.510±1.11

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