C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001AL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069752-ENSDARG00000008480 CGP 7955 13:15636050-15704078
GeneTranscriptPositionBiotype
ENSDARG00000008480 (trmt61a)
tRNA methyltransferase 61 homolog A (S. cerevisiae) 		ENSDART00000003517 (trmt61a-001) 15655824-15680283 protein_coding
ENSDART00000130832 (trmt61a-201) 15658725-15704078 protein_coding
ENSDART00000135960 (trmt61a-002) 15656117-15667083 protein_coding
ENSDARG00000069752 (ckba)
creatine kinase, brain a 		ENSDART00000010986 (ckba-002) 15636050-15654036 protein_coding
ENSDART00000101741 (ckba-001) 15636631-15654036 protein_coding
ENSDART00000139124 (ckba-003) 15639412-15654059 protein_coding
ENSDART00000144445 (ckba-004) 15639412-15656647 protein_coding
ENSDART00000146069 (ckba-005) 15639468-15650966 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0001AL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166165-ENSG00000166166 CGP 9606 14:103519659-103537073
GeneTranscriptPositionBiotype
ENSG00000166165 (CKB)
creatine kinase, brain 		ENST00000348956 (CKB-001) 103519659-103523111 protein_coding
ENST00000553528 (CKB-004) 103519695-103521770 retained_intron
ENST00000553610 (CKB-018) 103519862-103521342 protein_coding
ENST00000553652 (CKB-003) 103519702-103522821 nonsense_mediated_decay
ENST00000553878 (CKB-010) 103521263-103522696 protein_coding
ENST00000553994 (CKB-011) 103521828-103522696 retained_intron
ENST00000554282 (CKB-014) 103519679-103521443 retained_intron
ENST00000554426 (CKB-009) 103521262-103522802 retained_intron
ENST00000554705 (CKB-005) 103521648-103522833 retained_intron
ENST00000554989 (CKB-015) 103519668-103521322 nonsense_mediated_decay
ENST00000555039 (CKB-016) 103519992-103521101 protein_coding
ENST00000555366 (CKB-017) 103520153-103520728 retained_intron
ENST00000555659 (CKB-008) 103521621-103522830 retained_intron
ENST00000555770 (CKB-007) 103521683-103522830 retained_intron
ENST00000557287 (CKB-012) 103521283-103522302 retained_intron
ENST00000557530 (CKB-006) 103521827-103522833 protein_coding
ENST00000557569 (CKB-013) 103521237-103522198 retained_intron
ENSG00000166166 (TRMT61A)
tRNA methyltransferase 61 homolog A (S. cerevisiae) 		ENST00000299202 (TRMT61A-003) 103529226-103537073 protein_coding
ENST00000389749 (TRMT61A-001) 103529184-103537073 protein_coding
ENSG00000260285 (RP11-600F24.7)
 ENST00000568177 (RP11-600F24.7-001) 103525010-103529072 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0001AL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001270-ENSMUSG00000060950 CGP 10090 12:111669355-111683902
GeneTranscriptPositionBiotype
ENSMUSG00000001270 (Ckb)
creatine kinase, brain 		ENSMUST00000001304 (Ckb-201) 111669355-111672338 protein_coding
ENSMUSG00000060950 (Trmt61a)
tRNA methyltransferase 61A 		ENSMUST00000084947 (Trmt61a-201) 111678105-111683902 protein_coding
ENSMUST00000168338 (Trmt61a-202) 111678105-111683902 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AL_0001ENSDARG00000008480ENSDART00000003517ENSDART00000130832ENSDART00000135960ENSDARG00000069752ENSDART00000010986ENSDART00000101741ENSDART00000139124ENSDART00000144445ENSDART00000146069CIL_0001AL_0002ENSG00000166165ENST00000348956ENST00000553528ENST00000553610ENST00000553652ENST00000553878ENST00000553994ENST00000554282ENST00000554426ENST00000554705ENST00000554989ENST00000555039ENST00000555366ENST00000555659ENST00000555770ENST00000557287ENST00000557530ENST00000557569ENSG00000166166ENST00000299202ENST00000389749ENSG00000260285ENST00000568177CIL_0001AL_0003ENSMUSG00000001270ENSMUST00000001304ENSMUSG00000060950ENSMUST00000084947ENSMUST00000168338
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001AL_0001ENSDARG00000008480ENSDART00000003517ENSDART00000130832ENSDARG00000069752ENSDART00000010986ENSDART00000101741ENSDART00000139124CIL_0001AL_0002ENSG00000166165ENST00000348956ENST00000553528ENST00000553610ENST00000553652ENST00000553878ENST00000554282ENST00000554426ENST00000554989ENST00000555039ENST00000557287ENST00000557530ENSG00000166166ENST00000299202ENST00000389749ENSG00000260285ENST00000568177CIL_0001AL_0003ENSMUSG00000001270ENSMUST00000001304ENSMUSG00000060950ENSMUST00000084947ENSMUST00000168338
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008480 ENSDART00000003517 N/A N/A N/A 1.123±0.29 N/A N/A 0.991±0.20 2.996±1.58 1.366±0.00 N/A 0.485±0.00 N/A N/A N/A
ENSDART00000130832 N/A N/A N/A 0.482±0.00 N/A N/A 1.190±0.66 N/A 1.224±0.00 N/A 0.792±0.00 N/A N/A N/A
ENSDART00000135960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069752 ENSDART00000010986 N/A N/A N/A 1.444±0.89 N/A N/A 8.237±1.02 20.289±8.80 0.876±0.00 N/A N/A N/A N/A N/A
ENSDART00000101741 N/A N/A N/A 3.890±0.48 N/A N/A 10.223±0.26 33.259±0.00 0.556±0.00 N/A 10.867±0.00 N/A N/A N/A
ENSDART00000139124 N/A N/A N/A N/A N/A N/A N/A N/A 0.990±0.00 N/A N/A N/A N/A N/A
ENSDART00000144445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166165 ENST00000348956 N/A N/A 3.631±0.00 N/A N/A 2.561±0.00 2.420±0.00 N/A N/A 0.843±0.00 N/A 83.390±0.00 N/A N/A
ENST00000553528 N/A N/A N/A N/A 1.564±0.00 N/A N/A N/A 1.212±0.00 N/A N/A N/A 6.365±0.00 24.759±0.00
ENST00000553610 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.364±0.00 N/A N/A N/A N/A
ENST00000553652 23.718±0.00 15.429±0.00 N/A 274.510±238.63 32.272±0.00 157.359±148.67 44.208±40.62 42.575±42.06 4.637±3.82 0.746±0.00 N/A 18.325±13.12 7.866±2.78 81.415±52.09
ENST00000553878 N/A N/A 2.594±0.00 N/A N/A 6.376±0.00 1.926±0.00 N/A 20.568±0.00 N/A N/A 1.593±0.00 N/A N/A
ENST00000553994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554282 32.090±0.00 40.731±0.00 N/A 410.231±0.00 47.233±0.00 282.828±0.00 112.589±0.00 140.351±0.00 1.338±0.00 63.936±0.00 11.367±0.00 N/A N/A 155.467±0.00
ENST00000554426 N/A N/A N/A N/A N/A N/A 2.593±0.00 N/A N/A N/A 6.429±0.00 1.421±0.00 N/A N/A
ENST00000554705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554989 17.335±0.00 N/A 3.350±0.00 259.081±0.00 25.698±0.00 136.594±0.00 N/A N/A 7.201±5.04 47.725±0.00 N/A 43.974±18.41 12.719±1.47 68.960±27.85
ENST00000555039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 65.968±0.00 21.083±0.00 165.471±0.00
ENST00000555366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557287 N/A N/A N/A N/A 4.709±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557530 26.632±0.00 N/A 4.833±0.00 N/A N/A 157.879±148.96 115.615±0.00 N/A 4.402±0.00 5.233±0.00 N/A N/A 15.500±0.00 N/A
ENST00000557569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166166 ENST00000299202 N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A 0.532±0.41 0.033±0.00 0.929±0.77 N/A N/A
ENST00000389749 3.413±0.00 8.222±0.00 0.300±0.00 2.283±1.90 4.946±0.00 3.663±3.19 0.700±0.62 2.691±2.44 2.051±1.55 1.990±0.00 1.891±0.00 5.744±2.84 5.715±2.62 4.988±2.13
ENSG00000260285 ENST00000568177 0.418±0.00 0.846±0.00 0.417±0.00 0.399±0.15 0.526±0.03 0.505±0.03 0.147±0.12 0.622±0.27 0.223±0.08 0.184±0.04 0.214±0.12 0.268±0.12 0.066±0.00 0.762±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001270 ENSMUST00000001304 169.457±101.93 61.352±19.70 1065.987±66.63 687.204±233.13 36.238±15.50 255.500±40.07 42.444±5.75 115.154±5.12 14.693±9.75 93.818±6.83 2.272±0.75 273.018±114.93 94.598±35.33 7.468±4.37
ENSMUSG00000060950 ENSMUST00000084947 6.616±2.23 5.985±0.74 3.292±0.49 4.720±1.20 4.804±1.36 3.434±0.70 1.661±0.32 1.688±0.31 3.337±2.32 3.096±0.49 1.497±0.54 9.694±4.23 2.344±1.10 1.117±0.64
ENSMUST00000168338 N/A N/A N/A N/A N/A N/A 0.437±0.00 0.651±0.00 N/A 3.942±0.00 N/A 2.479±0.64 1.873±1.21 N/A

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