C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001B6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068971-ENSDARG00000086530 CGP 7955 5:7176108-7201201
GeneTranscriptPositionBiotype
ENSDARG00000068971 (MEX3C)
mex-3 RNA binding family member C 		ENSDART00000099977 (MEX3C-201) 7176108-7180791 protein_coding
ENSDARG00000086530 ()
SMAD family member 4 		ENSDART00000048201 () 7197184-7201201 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001B6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037253-ENSMUSG00000024515 CGP 10090 18:73573044-73703780
GeneTranscriptPositionBiotype
ENSMUSG00000024515 (Smad4)
SMAD family member 4 		ENSMUST00000025393 (Smad4-001) 73639009-73703780 protein_coding
ENSMUST00000114939 (Smad4-002) 73640001-73678231 protein_coding
ENSMUST00000129326 (Smad4-003) 73658779-73675118 processed_transcript
ENSMUST00000131339 (Smad4-004) 73640158-73642563 processed_transcript
ENSMUST00000142672 (Smad4-005) 73640223-73662775 processed_transcript
ENSMUST00000147315 (Smad4-006) 73640212-73649819 processed_transcript
ENSMUSG00000037253 (Mex3c)
mex3 homolog C (C. elegans) 		ENSMUST00000091852 (Mex3c-001) 73573044-73592575 protein_coding
ENSMUSG00000076941 (Gm22065)
predicted gene, 22065 		ENSMUST00000103753 (Gm22065-201) 73624928-73625037 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001B6_0001ENSDARG00000068971ENSDART00000099977ENSDARG00000086530ENSDART00000048201CIL_0001B6_0002ENSMUSG00000024515ENSMUST00000025393ENSMUST00000114939ENSMUST00000129326ENSMUST00000131339ENSMUST00000142672ENSMUST00000147315ENSMUSG00000037253ENSMUST00000091852ENSMUSG00000076941ENSMUST00000103753
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001B6_0001ENSDARG00000068971ENSDART00000099977ENSDARG00000086530ENSDART00000048201CIL_0001B6_0002ENSMUSG00000024515ENSMUST00000025393ENSMUST00000114939ENSMUST00000142672ENSMUSG00000037253ENSMUST00000091852ENSMUSG00000076941ENSMUST00000103753
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068971 ENSDART00000099977 N/A N/A N/A 3.195±0.00 N/A N/A 0.959±0.00 N/A 1.008±0.00 N/A 0.775±0.00 N/A N/A N/A
ENSDARG00000086530 ENSDART00000048201 N/A N/A N/A N/A N/A N/A 1.620±0.00 0.493±0.00 0.353±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024515 ENSMUST00000025393 7.236±1.14 18.327±11.10 5.954±1.02 6.219±0.85 6.561±2.73 28.729±6.31 2.325±0.11 6.493±2.34 4.114±1.46 8.495±2.77 4.597±1.28 14.840±7.11 11.353±4.29 1.717±0.17
ENSMUST00000114939 8.897±1.82 11.034±0.00 N/A 8.258±2.41 8.807±0.95 8.028±0.00 5.283±1.38 5.779±1.48 2.408±0.95 13.764±2.10 N/A 13.622±5.56 7.985±3.07 4.592±1.21
ENSMUST00000129326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142672 7.269±1.73 11.790±0.77 N/A N/A 11.540±2.88 26.915±3.21 6.849±0.69 6.683±0.20 5.048±1.21 10.173±0.73 N/A 15.478±0.00 N/A 2.215±0.00
ENSMUST00000147315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037253 ENSMUST00000091852 10.926±2.94 6.593±2.59 11.861±1.99 13.817±7.10 8.786±1.40 8.283±0.84 4.375±0.55 5.827±0.18 5.039±1.66 11.720±0.26 3.405±0.42 33.153±6.41 14.552±2.49 14.335±4.65
ENSMUSG00000076941 ENSMUST00000103753 N/A N/A N/A 0.886±0.00 N/A N/A N/A N/A 1.786±0.00 N/A N/A N/A N/A N/A

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