C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074262-ENSDARG00000056262 CGP 7955 2:24733450-24766030
GeneTranscriptPositionBiotype
ENSDARG00000056262 (slc35g2a)
solute carrier family 35, member G2a 		ENSDART00000111507 (slc35g2a-201) 24759990-24766030 protein_coding
ENSDART00000144795 (slc35g2a-001) 24759987-24766030 protein_coding
ENSDARG00000074262 (nck1a)
NCK adaptor protein 1a 		ENSDART00000111212 (nck1a-001) 24733450-24750945 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001BW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075369-ENSDARG00000075369 CGP 7955 24:3425230-3544764
GeneTranscriptPositionBiotype
ENSDARG00000045447 (slc35g2b)
solute carrier family 35, member G2b 		ENSDART00000066839 (slc35g2b-001) 3491574-3497718 protein_coding
ENSDARG00000075369 (nck1b)
NCK adaptor protein 1b 		ENSDART00000109339 (nck1b-201) 3425235-3452613 protein_coding
ENSDART00000132648 (nck1b-001) 3425230-3485227 protein_coding
ENSDART00000134577 (nck1b-002) 3452404-3544764 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0001BW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032475-ENSMUSG00000070287 CGP 10090 9:100492293-100571090
GeneTranscriptPositionBiotype
ENSMUSG00000032475 (Nck1)
non-catalytic region of tyrosine kinase adaptor protein 1 		ENSMUST00000112874 (Nck1-002) 100495003-100506856 protein_coding
ENSMUST00000116522 (Nck1-001) 100492293-100546134 protein_coding
ENSMUST00000186591 (Nck1-006) 100497577-100546122 protein_coding
ENSMUST00000188670 (Nck1-003) 100497800-100545731 protein_coding
ENSMUSG00000070287 (Slc35g2)
solute carrier family 35, member G2 		ENSMUST00000093792 (Slc35g2-001) 100552188-100571090 protein_coding
ENSMUST00000189478 (Slc35g2-002) 100552190-100552915 processed_transcript
ENSMUSG00000100176 (RP24-535L7.6)
predicted gene 28586 		ENSMUST00000189857 (RP24-535L7.6-001) 100530616-100531071 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BW_0001ENSDARG00000056262ENSDART00000111507ENSDART00000144795ENSDARG00000074262ENSDART00000111212CIL_0001BW_0002ENSDARG00000045447ENSDART00000066839ENSDARG00000075369ENSDART00000109339ENSDART00000132648ENSDART00000134577CIL_0001BW_0003ENSMUSG00000032475ENSMUST00000112874ENSMUST00000116522ENSMUST00000186591ENSMUST00000188670ENSMUSG00000070287ENSMUST00000093792ENSMUST00000189478ENSMUSG00000100176ENSMUST00000189857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BW_0001ENSDARG00000056262ENSDART00000111507ENSDART00000144795ENSDARG00000074262ENSDART00000111212CIL_0001BW_0002ENSDARG00000045447ENSDART00000066839ENSDARG00000075369ENSDART00000109339ENSDART00000132648CIL_0001BW_0003ENSMUSG00000032475ENSMUST00000112874ENSMUST00000116522ENSMUST00000186591ENSMUSG00000070287ENSMUST00000093792ENSMUST00000189478ENSMUSG00000100176ENSMUST00000189857
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056262 ENSDART00000111507 N/A N/A N/A 8.605±1.22 N/A N/A 0.586±0.31 0.780±0.10 N/A N/A 0.539±0.00 N/A N/A N/A
ENSDART00000144795 N/A N/A N/A 32.183±14.15 N/A N/A 0.487±0.00 0.630±0.00 N/A N/A 1.381±0.00 N/A N/A N/A
ENSDARG00000074262 ENSDART00000111212 N/A N/A N/A 7.943±2.50 N/A N/A 22.099±10.08 18.174±5.29 0.213±0.00 N/A 2.645±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045447 ENSDART00000066839 N/A N/A N/A 25.748±28.25 N/A N/A 0.279±0.00 0.083±0.00 0.076±0.00 N/A 2.445±0.00 N/A N/A N/A
ENSDARG00000075369 ENSDART00000109339 N/A N/A N/A 3.613±1.20 N/A N/A 3.497±3.97 1.152±0.09 0.935±0.00 N/A 2.673±0.00 N/A N/A N/A
ENSDART00000132648 N/A N/A N/A 7.799±4.58 N/A N/A 3.486±0.00 2.777±0.00 N/A N/A 1.441±0.00 N/A N/A N/A
ENSDART00000134577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032475 ENSMUST00000112874 6.386±1.12 N/A 9.229±4.01 6.454±1.79 4.281±1.06 1.645±0.88 4.977±0.91 2.420±0.45 4.461±3.19 5.264±1.56 6.098±1.72 8.927±8.30 14.323±2.96 5.085±1.49
ENSMUST00000116522 1.223±0.21 1.092±0.17 1.195±0.51 1.364±0.83 1.135±0.32 1.870±0.37 0.920±0.16 1.290±0.36 1.483±0.48 3.267±0.71 0.654±0.07 2.040±0.89 2.661±0.01 1.713±0.58
ENSMUST00000186591 N/A N/A 6.796±0.00 4.774±0.40 N/A N/A N/A N/A 4.332±0.33 N/A 4.099±0.00 9.639±1.29 9.602±2.63 8.240±4.96
ENSMUST00000188670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070287 ENSMUST00000093792 0.850±0.20 1.873±0.43 2.553±0.61 3.857±0.54 1.164±0.64 1.714±0.71 2.195±0.31 1.204±0.40 0.462±0.28 6.547±0.69 0.375±0.14 1.477±0.50 1.013±0.29 1.309±0.54
ENSMUST00000189478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A
ENSMUSG00000100176 ENSMUST00000189857 0.118±0.00 N/A 0.049±0.03 0.149±0.00 0.520±0.00 N/A N/A 0.212±0.06 0.177±0.13 0.479±0.00 N/A N/A 0.136±0.00 0.202±0.05

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