C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001CF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000231256-ENSG00000161647 CGP 9606 17:43780435-43833170
GeneTranscriptPositionBiotype
ENSG00000161647 (MPP3)
membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) 		ENST00000398389 (MPP3-001) 43801443-43833170 protein_coding
ENST00000398393 (MPP3-002) 43800799-43832242 protein_coding
ENST00000466083 (MPP3-007) 43811157-43814394 retained_intron
ENST00000475450 (MPP3-006) 43814011-43814634 processed_transcript
ENST00000479797 (MPP3-005) 43814011-43820914 nonsense_mediated_decay
ENST00000480958 (MPP3-004) 43825041-43831633 retained_intron
ENST00000486600 (MPP3-008) 43809000-43811571 retained_intron
ENST00000496503 (MPP3-003) 43801418-43833170 nonsense_mediated_decay
ENST00000589375 (MPP3-009) 43817919-43833144 retained_intron
ENSG00000231256 (C17orf105)
chromosome 17 open reading frame 105 		ENST00000449302 (C17orf105-001) 43780435-43787612 protein_coding
ENST00000590148 (C17orf105-002) 43783186-43784833 nonsense_mediated_decay
ENSG00000267604 (RP5-905N1.2)
 ENST00000591540 (RP5-905N1.2-001) 43782804-43784682 antisense
CIL_0001CF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000010841-ENSMUSG00000052373 CGP 10090 11:101984279-102028461
GeneTranscriptPositionBiotype
ENSMUSG00000003518 (Dusp3)
dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 		ENSMUST00000003612 (Dusp3-001) 101971143-101984799 protein_coding
ENSMUST00000107172 (Dusp3-004) 101971143-101987013 protein_coding
ENSMUST00000107173 (Dusp3-003) 101971143-101987013 protein_coding
ENSMUST00000125794 (Dusp3-005) 101973469-101981688 protein_coding
ENSMUST00000143177 (Dusp3-006) 101974716-101984778 protein_coding
ENSMUST00000151678 (Dusp3-002) 101971143-101983503 protein_coding
ENSMUST00000176261 (Dusp3-007) 101980594-101984751 protein_coding
ENSMUSG00000010841 (1700006E09Rik)
RIKEN cDNA 1700006E09 gene 		ENSMUST00000010985 (1700006E09Rik-001) 101987056-101992264 protein_coding
ENSMUST00000175972 (1700006E09Rik-003) 101984284-101990850 protein_coding
ENSMUST00000176722 (1700006E09Rik-002) 101984279-101992256 protein_coding
ENSMUSG00000052373 (Mpp3)
membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) 		ENSMUST00000062801 (Mpp3-001) 101999652-102026955 protein_coding
ENSMUST00000100400 (Mpp3-005) 101999652-102026094 protein_coding
ENSMUST00000107167 (Mpp3-008) 102017336-102026937 protein_coding
ENSMUST00000107168 (Mpp3-004) 101999652-102028461 protein_coding
ENSMUST00000127053 (Mpp3-009) 102008640-102010410 retained_intron
ENSMUST00000132094 (Mpp3-002) 101999652-102026934 processed_transcript
ENSMUST00000141403 (Mpp3-006) 102025387-102026755 processed_transcript
ENSMUST00000147838 (Mpp3-003) 102021102-102026934 processed_transcript
ENSMUST00000155751 (Mpp3-007) 102023434-102025857 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CF_0001ENSG00000161647ENST00000398389ENST00000398393ENST00000466083ENST00000475450ENST00000479797ENST00000480958ENST00000486600ENST00000496503ENST00000589375ENSG00000231256ENST00000449302ENST00000590148ENSG00000267604ENST00000591540CIL_0001CF_0002ENSMUSG00000003518ENSMUST00000003612ENSMUST00000107172ENSMUST00000107173ENSMUST00000125794ENSMUST00000143177ENSMUST00000151678ENSMUST00000176261ENSMUSG00000010841ENSMUST00000010985ENSMUST00000175972ENSMUST00000176722ENSMUSG00000052373ENSMUST00000062801ENSMUST00000100400ENSMUST00000107167ENSMUST00000107168ENSMUST00000127053ENSMUST00000132094ENSMUST00000141403ENSMUST00000147838ENSMUST00000155751
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CF_0001ENSG00000161647ENST00000398389ENST00000398393ENST00000466083ENST00000479797ENST00000480958ENST00000486600ENST00000496503ENST00000589375ENSG00000231256ENST00000449302ENST00000590148ENSG00000267604ENST00000591540CIL_0001CF_0002ENSMUSG00000003518ENSMUST00000003612ENSMUST00000107172ENSMUST00000107173ENSMUST00000125794ENSMUST00000143177ENSMUST00000151678ENSMUST00000176261ENSMUSG00000010841ENSMUST00000010985ENSMUST00000175972ENSMUST00000176722ENSMUSG00000052373ENSMUST00000062801ENSMUST00000100400ENSMUST00000107167ENSMUST00000127053ENSMUST00000132094ENSMUST00000147838
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161647 ENST00000398389 N/A N/A N/A N/A N/A 0.108±0.00 1.840±0.00 0.706±0.58 N/A 2.942±0.00 0.083±0.00 0.896±0.50 N/A N/A
ENST00000398393 N/A N/A 0.031±0.00 0.592±0.00 N/A N/A 0.420±0.00 N/A N/A N/A N/A N/A N/A 0.221±0.00
ENST00000466083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 N/A
ENST00000475450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479797 N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A 0.270±0.00 N/A
ENST00000480958 1.061±0.00 N/A 0.107±0.00 N/A N/A 0.228±0.00 2.018±0.00 0.656±0.00 N/A 2.608±0.00 N/A 0.570±0.00 0.223±0.12 N/A
ENST00000486600 N/A 0.997±0.00 N/A N/A N/A 0.224±0.00 N/A N/A N/A N/A N/A 4.684±3.69 N/A 3.941±0.00
ENST00000496503 0.953±0.00 0.680±0.00 N/A 1.784±0.00 1.539±0.00 N/A 4.641±0.00 N/A 0.669±0.00 2.010±0.00 N/A 2.364±0.90 0.389±0.25 1.690±0.09
ENST00000589375 N/A N/A 0.123±0.00 N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A
ENSG00000231256 ENST00000449302 0.043±0.00 0.166±0.00 N/A 0.119±0.00 0.149±0.00 0.052±0.02 0.034±0.00 0.112±0.00 0.017±0.00 0.114±0.00 N/A 0.039±0.01 0.013±0.00 4.192±0.05
ENST00000590148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 15.841±7.35
ENSG00000267604 ENST00000591540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.264±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003518 ENSMUST00000003612 17.905±4.40 24.563±1.68 20.180±0.78 5.436±3.95 15.925±1.88 14.599±1.83 15.432±1.02 10.267±1.44 3.607±1.25 33.234±6.48 28.602±1.19 12.132±3.88 5.049±1.98 N/A
ENSMUST00000107172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.031±0.84
ENSMUST00000107173 8.557±3.80 6.840±0.69 N/A N/A 4.592±1.07 4.282±0.62 3.893±0.22 3.597±1.03 1.176±0.67 7.811±1.18 N/A 4.605±0.61 1.285±0.02 10.733±0.00
ENSMUST00000125794 N/A N/A N/A 108.544±0.00 N/A N/A N/A N/A N/A N/A N/A 25.123±0.00 33.894±1.11 194.938±143.07
ENSMUST00000143177 N/A 26.673±5.18 N/A N/A N/A N/A N/A N/A N/A 52.160±0.00 N/A 19.067±2.41 N/A N/A
ENSMUST00000151678 N/A N/A N/A N/A 11.383±0.00 N/A N/A N/A N/A N/A N/A 6.616±2.26 3.528±0.89 N/A
ENSMUST00000176261 38.407±12.20 54.279±0.19 N/A N/A 29.366±0.91 34.474±3.36 N/A 21.761±0.86 11.524±1.07 61.859±0.00 N/A 27.631±6.91 N/A 60.626±0.00
ENSMUSG00000010841 ENSMUST00000010985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.675±9.66
ENSMUST00000175972 0.449±0.00 0.436±0.02 N/A 0.219±0.00 0.725±0.24 0.521±0.00 N/A N/A 0.188±0.00 N/A N/A 1.405±0.00 N/A N/A
ENSMUST00000176722 N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A 0.010±0.00 219.387±0.00
ENSMUSG00000052373 ENSMUST00000062801 1.524±0.28 7.012±1.30 0.324±0.00 21.134±3.41 1.610±0.82 3.594±0.69 0.466±0.07 0.738±0.13 0.111±0.08 0.972±0.37 7.500±1.61 5.366±1.79 0.303±0.16 2.977±0.83
ENSMUST00000100400 N/A N/A N/A N/A 0.420±0.11 1.098±0.00 N/A N/A N/A N/A N/A 1.221±0.19 N/A N/A
ENSMUST00000107167 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A
ENSMUST00000107168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127053 N/A N/A N/A N/A N/A 4.698±0.00 N/A N/A 0.069±0.02 N/A N/A N/A N/A N/A
ENSMUST00000132094 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 0.457±0.00 N/A 0.608±0.00 0.052±0.00 N/A
ENSMUST00000141403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147838 N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.01 N/A N/A N/A 0.103±0.02 N/A
ENSMUST00000155751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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