C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001DE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147592-ENSG00000221947 CGP 9606 8:70635318-70790371
GeneTranscriptPositionBiotype
ENSG00000147592 (LACTB2)
lactamase, beta 2 		ENST00000276590 (LACTB2-001) 70637256-70669157 protein_coding
ENST00000517601 (LACTB2-004) 70638551-70644252 processed_transcript
ENST00000522447 (LACTB2-002) 70635318-70669174 protein_coding
ENST00000522558 (LACTB2-003) 70640573-70644128 retained_intron
ENSG00000221947 (XKR9)
XK, Kell blood group complex subunit-related family, member 9 		ENST00000408926 (XKR9-001) 70669365-70735942 protein_coding
ENST00000519350 (XKR9-004) 70670573-70681325 protein_coding
ENST00000520030 (XKR9-005) 70669398-70734490 protein_coding
ENST00000520092 (XKR9-003) 70669365-70734491 nonsense_mediated_decay
ENST00000520273 (XKR9-002) 70669408-70790371 processed_transcript
ENSG00000223220 (Y_RNA)
Y RNA 		ENST00000411288 (Y_RNA.1-828) 70780914-70781008 misc_RNA
ENSG00000243532 (RN7SL19P)
RNA, 7SL, cytoplasmic 19, pseudogene 		ENST00000462522 (RN7SL19P-201) 70654578-70654883 misc_RNA
ENSG00000246366 (RP11-382J12.1)
 ENST00000499227 (RP11-382J12.1-001) 70608577-70663279 antisense
ENST00000518152 (RP11-382J12.1-004) 70608682-70646490 antisense
ENST00000518553 (RP11-382J12.1-005) 70608604-70653981 antisense
ENST00000519167 (RP11-382J12.1-003) 70613935-70646709 antisense
ENST00000519358 (RP11-382J12.1-002) 70608592-70632796 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0001DE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025937-ENSMUSG00000067813 CGP 10090 1:13623330-13701723
GeneTranscriptPositionBiotype
ENSMUSG00000025937 (Lactb2)
lactamase, beta 2 		ENSMUST00000027071 (Lactb2-001) 13623330-13660546 protein_coding
ENSMUST00000156222 (Lactb2-002) 13629995-13638411 retained_intron
ENSMUSG00000067813 (Xkr9)
X Kell blood group precursor related family member 9 homolog 		ENSMUST00000088542 (Xkr9-001) 13668771-13701723 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DE_0001ENSG00000147592ENST00000276590ENST00000517601ENST00000522447ENST00000522558ENSG00000221947ENST00000408926ENST00000519350ENST00000520030ENST00000520092ENST00000520273ENSG00000223220ENST00000411288ENSG00000243532ENST00000462522ENSG00000246366ENST00000499227ENST00000518152ENST00000518553ENST00000519167ENST00000519358CIL_0001DE_0002ENSMUSG00000025937ENSMUST00000027071ENSMUST00000156222ENSMUSG00000067813ENSMUST00000088542
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DE_0001ENSG00000147592ENST00000276590ENST00000522447ENSG00000221947ENST00000408926ENST00000519350ENST00000520030ENST00000520092ENSG00000223220ENST00000411288ENSG00000243532ENST00000462522ENSG00000246366ENST00000499227ENST00000518152ENST00000519167CIL_0001DE_0002ENSMUSG00000025937ENSMUST00000027071ENSMUST00000156222ENSMUSG00000067813ENSMUST00000088542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147592 ENST00000276590 0.831±0.00 1.090±0.00 N/A 1.452±0.30 1.995±0.01 1.436±0.20 2.118±0.87 6.886±2.10 3.646±1.79 1.191±0.75 0.786±0.26 1.834±0.75 0.736±0.25 3.425±0.00
ENST00000517601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522447 2.855±0.00 3.256±0.00 7.498±0.00 2.672±0.50 3.391±2.30 1.792±0.31 4.711±3.12 12.554±8.06 9.260±7.82 1.420±0.42 2.269±1.41 5.654±3.51 2.984±0.42 27.838±6.11
ENST00000522558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221947 ENST00000408926 0.055±0.00 0.261±0.00 0.266±0.00 0.561±0.00 0.091±0.00 0.163±0.09 0.144±0.00 0.105±0.00 0.116±0.00 0.190±0.00 0.039±0.03 0.260±0.23 0.049±0.01 0.682±0.40
ENST00000519350 N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A
ENST00000520030 N/A N/A N/A N/A N/A N/A N/A 0.780±0.00 0.277±0.00 0.072±0.00 N/A 0.037±0.00 N/A 1.117±0.00
ENST00000520092 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 0.045±0.00 N/A 2.131±0.62
ENST00000520273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223220 ENST00000411288 N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243532 ENST00000462522 N/A 0.234±0.00 N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000246366 ENST00000499227 N/A N/A N/A N/A 0.613±0.00 1.185±0.00 N/A 1.655±0.00 0.417±0.00 N/A 0.389±0.00 N/A N/A N/A
ENST00000518152 1.071±0.00 3.095±0.00 N/A 4.030±0.00 2.317±0.00 N/A 1.828±0.00 N/A N/A 0.846±0.00 N/A N/A 0.784±0.00 N/A
ENST00000518553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519167 N/A N/A N/A N/A 1.898±0.00 N/A N/A N/A 1.116±0.00 1.389±0.00 0.530±0.00 N/A N/A N/A
ENST00000519358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025937 ENSMUST00000027071 11.830±3.11 16.503±3.52 6.063±0.71 1.017±0.49 14.281±4.43 10.905±3.38 4.333±1.15 117.264±11.28 56.826±45.16 12.117±1.79 2.442±1.03 9.658±5.12 5.878±3.23 0.429±0.14
ENSMUST00000156222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.936±2.60 N/A
ENSMUSG00000067813 ENSMUST00000088542 N/A N/A 0.348±0.02 0.005±0.00 N/A 0.516±0.25 N/A 0.133±0.04 2.335±1.57 0.041±0.00 N/A 0.025±0.00 1.620±2.29 0.124±0.05

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