C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017115-ENSDARG00000061960 CGP 7955 5:21219811-21255449
GeneTranscriptPositionBiotype
ENSDARG00000017115 (kctd10)
potassium channel tetramerisation domain containing 10 		ENSDART00000011596 (kctd10-201) 21222682-21226831 protein_coding
ENSDART00000136259 (kctd10-001) 21219811-21228258 protein_coding
ENSDART00000141268 (kctd10-002) 21226006-21228277 retained_intron
ENSDARG00000061960 (ube3b)
ubiquitin protein ligase E3B 		ENSDART00000088968 (ube3b-001) 21231406-21255449 protein_coding
CIL_0001GM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110906-ENSG00000151148 CGP 9606 12:109448656-109536705
GeneTranscriptPositionBiotype
ENSG00000110906 (KCTD10)
potassium channel tetramerization domain containing 10 		ENST00000228495 (KCTD10-001) 109448656-109477544 protein_coding
ENST00000440541 (KCTD10-002) 109449971-109477359 nonsense_mediated_decay
ENST00000535546 (KCTD10-012) 109451634-109458982 protein_coding
ENST00000535747 (KCTD10-010) 109460326-109477300 retained_intron
ENST00000537165 (KCTD10-003) 109451287-109477300 nonsense_mediated_decay
ENST00000538161 (KCTD10-005) 109451404-109464895 processed_transcript
ENST00000538377 (KCTD10-009) 109469062-109477300 retained_intron
ENST00000540089 (KCTD10-007) 109449961-109458985 protein_coding
ENST00000540355 (KCTD10-013) 109451682-109458871 protein_coding
ENST00000540402 (KCTD10-014) 109451641-109457975 retained_intron
ENST00000540411 (KCTD10-004) 109451595-109469724 protein_coding
ENST00000541077 (KCTD10-008) 109456222-109477289 nonsense_mediated_decay
ENST00000542262 (KCTD10-016) 109456243-109477305 protein_coding
ENST00000542858 (KCTD10-015) 109456285-109477300 protein_coding
ENST00000542954 (KCTD10-011) 109451630-109460395 protein_coding
ENST00000545759 (KCTD10-006) 109449971-109459629 retained_intron
ENSG00000174527 (MYO1H)
myosin IH 		ENST00000310903 (MYO1H-001) 109347903-109448371 protein_coding
ENST00000431443 (MYO1H-201) 109388719-109448371 protein_coding
ENST00000457826 (MYO1H-005) 109440567-109443670 retained_intron
ENST00000542268 (MYO1H-003) 109439537-109447455 retained_intron
ENST00000542883 (MYO1H-004) 109401405-109407881 processed_transcript
ENST00000543960 (MYO1H-006) 109443562-109455523 nonsense_mediated_decay
CIL_0001GM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001098-ENSMUSG00000029577 CGP 10090 5:114363567-114421168
GeneTranscriptPositionBiotype
ENSMUSG00000029577 (Ube3b)
ubiquitin protein ligase E3B 		ENSMUST00000074002 (Ube3b-001) 114380628-114421168 protein_coding
ENSMUST00000130169 (Ube3b-002) 114380826-114421168 nonsense_mediated_decay
ENSMUST00000150630 (Ube3b-004) 114402725-114411135 processed_transcript
ENSMUST00000151809 (Ube3b-003) 114380833-114392159 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GM_0001ENSDARG00000017115ENSDART00000011596ENSDART00000136259ENSDART00000141268ENSDARG00000061960ENSDART00000088968CIL_0001GM_0002ENSG00000110906ENST00000228495ENST00000440541ENST00000535546ENST00000535747ENST00000537165ENST00000538161ENST00000538377ENST00000540089ENST00000540355ENST00000540402ENST00000540411ENST00000541077ENST00000542262ENST00000542858ENST00000542954ENST00000545759ENSG00000174527ENST00000310903ENST00000431443ENST00000457826ENST00000542268ENST00000542883ENST00000543960CIL_0001GM_0003ENSMUSG00000029577ENSMUST00000074002ENSMUST00000130169ENSMUST00000150630ENSMUST00000151809
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GM_0001ENSDARG00000017115ENSDART00000011596ENSDART00000136259ENSDARG00000061960ENSDART00000088968CIL_0001GM_0002ENSG00000110906ENST00000228495ENST00000440541ENSG00000174527ENST00000310903ENST00000431443ENST00000457826ENST00000542268ENST00000543960CIL_0001GM_0003ENSMUSG00000029577ENSMUST00000074002ENSMUST00000130169ENSMUST00000150630
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017115 ENSDART00000011596 N/A N/A N/A N/A N/A N/A 12.530±0.00 6.310±0.00 1.734±0.00 N/A N/A N/A N/A N/A
ENSDART00000136259 N/A N/A N/A 4.678±2.80 N/A N/A 12.649±4.49 8.055±3.91 1.497±0.00 N/A 4.324±0.00 N/A N/A N/A
ENSDART00000141268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061960 ENSDART00000088968 N/A N/A N/A 0.748±0.43 N/A N/A 0.818±0.00 0.216±0.00 0.293±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110906 ENST00000228495 23.375±0.00 19.343±0.00 N/A 6.311±0.00 5.822±3.12 10.713±0.00 4.149±3.10 1.918±0.00 2.296±0.00 11.131±7.91 3.383±0.00 8.966±5.58 7.090±1.38 7.972±2.20
ENST00000440541 16.623±0.00 9.215±0.00 N/A N/A 12.723±0.00 8.761±0.00 N/A N/A 1.757±0.00 N/A N/A 10.217±0.00 12.961±3.50 11.686±3.83
ENST00000535546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174527 ENST00000310903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.383±0.00
ENST00000431443 N/A N/A 0.032±0.00 0.022±0.00 0.074±0.00 0.011±0.00 0.053±0.00 0.034±0.00 N/A N/A N/A 0.013±0.01 0.029±0.02 0.957±0.00
ENST00000457826 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542268 N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A
ENST00000542883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543960 N/A N/A N/A N/A N/A 0.149±0.00 0.084±0.00 0.105±0.00 N/A 0.069±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029577 ENSMUST00000074002 24.329±5.52 41.290±10.09 10.795±0.68 14.267±5.42 24.370±4.84 27.685±8.63 20.870±1.47 18.131±2.76 10.680±3.59 25.837±3.31 39.162±3.01 28.139±9.99 9.819±4.94 42.768±19.79
ENSMUST00000130169 N/A 13.490±0.00 4.455±0.00 5.982±0.06 N/A N/A N/A N/A 2.891±1.96 N/A 7.311±2.19 4.545±0.00 3.410±0.89 5.129±0.00
ENSMUST00000150630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.011±0.00 N/A
ENSMUST00000151809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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