C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182463-ENSG00000171940 CGP 9606 20:52972407-53609907
GeneTranscriptPositionBiotype
ENSG00000171940 (ZNF217)
zinc finger protein 217 		ENST00000302342 (ZNF217-201) 53567073-53583097 protein_coding
ENST00000371471 (ZNF217-001) 53567065-53593839 protein_coding
ENST00000431687 (ZNF217-004) 53582542-53608892 protein_coding
ENST00000437222 (ZNF217-002) 53568820-53576027 protein_coding
ENST00000540425 (ZNF217-003) 53582925-53609907 processed_transcript
ENSG00000182463 (TSHZ2)
teashirt zinc finger homeobox 2 		ENST00000329613 (TSHZ2-201) 53185646-53256560 protein_coding
ENST00000371497 (TSHZ2-001) 52972407-53495330 protein_coding
ENST00000603338 (TSHZ2-002) 53185283-53487479 protein_coding
ENST00000605656 (TSHZ2-003) 53255979-53491063 nonsense_mediated_decay
ENSG00000197670 (RP4-724E16.2)
 ENST00000424252 (RP4-724E16.2-001) 53552770-53575308 antisense
ENSG00000199218 (RN7SKP184)
RNA, 7SK small nuclear pseudogene 184 		ENST00000362348 (RN7SKP184-201) 53097652-53097984 misc_RNA
ENSG00000206959 (Y_RNA)
Y RNA 		ENST00000384232 (Y_RNA.1-658) 53544615-53544725 misc_RNA
ENSG00000223492 (RP11-15M15.1)
 ENST00000432706 (RP11-15M15.1-001) 53168643-53179550 antisense
ENSG00000224530 (PPIAP10)
peptidylprolyl isomerase A (cyclophilin A) pseudogene 10 		ENST00000438675 (PPIAP10-001) 53421199-53421656 processed_pseudogene
ENSG00000227705 (RP11-15M15.2)
 ENST00000435057 (RP11-15M15.2-001) 53196229-53208705 antisense
ENSG00000231703 (RP4-669H2.1)
 ENST00000436286 (RP4-669H2.1-001) 53397661-53412910 antisense
ENSG00000259723 (RP5-823G15.5)
 ENST00000558738 (RP5-823G15.5-001) 53453058-53504314 antisense
ENSG00000271774 (RP4-678D15.1)
 ENST00000606932 (RP4-678D15.1-001) 53255979-53487274 antisense
CIL_0001GY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047907-ENSMUSG00000052056 CGP 10090 2:169633013-170148103
GeneTranscriptPositionBiotype
ENSMUSG00000052056 (Zfp217)
zinc finger protein 217 		ENSMUST00000063710 (Zfp217-201) 170108643-170131220 protein_coding
ENSMUST00000109155 (Zfp217-001) 170108646-170142678 protein_coding
ENSMUST00000125162 (Zfp217-004) 170120619-170133945 processed_transcript
ENSMUST00000149088 (Zfp217-002) 170120333-170131220 processed_transcript
ENSMUST00000149318 (Zfp217-003) 170120719-170148103 processed_transcript
ENSMUSG00000096972 (Gm26883)
predicted gene, 26883 		ENSMUST00000180945 (Gm26883-201) 169633676-169888503 lincRNA
ENSMUST00000181446 (Gm26883-202) 169633646-169888503 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GY_0001ENSG00000171940ENST00000302342ENST00000371471ENST00000431687ENST00000437222ENST00000540425ENSG00000182463ENST00000329613ENST00000371497ENST00000603338ENST00000605656ENSG00000197670ENST00000424252ENSG00000199218ENST00000362348ENSG00000206959ENST00000384232ENSG00000223492ENST00000432706ENSG00000224530ENST00000438675ENSG00000227705ENST00000435057ENSG00000231703ENST00000436286ENSG00000259723ENST00000558738ENSG00000271774ENST00000606932CIL_0001GY_0002ENSMUSG00000052056ENSMUST00000063710ENSMUST00000109155ENSMUST00000125162ENSMUST00000149088ENSMUST00000149318ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GY_0001ENSG00000171940ENST00000302342ENST00000371471ENST00000437222ENSG00000182463ENST00000329613ENST00000371497ENSG00000197670ENST00000424252ENSG00000199218ENST00000362348ENSG00000206959ENST00000384232ENSG00000223492ENST00000432706ENSG00000224530ENST00000438675ENSG00000227705ENST00000435057ENSG00000231703ENST00000436286ENSG00000259723ENST00000558738ENSG00000271774ENST00000606932CIL_0001GY_0002ENSMUSG00000052056ENSMUST00000063710ENSMUST00000109155ENSMUST00000149088ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171940 ENST00000302342 3.647±0.00 6.442±0.00 N/A 0.820±0.00 5.531±0.00 2.895±0.28 0.814±0.51 3.640±1.86 3.070±0.43 2.931±0.38 0.785±0.50 4.546±1.57 3.667±1.30 10.362±1.28
ENST00000371471 4.718±0.00 N/A N/A 0.228±0.09 2.345±0.00 N/A N/A N/A 0.794±0.00 N/A N/A 2.243±0.11 0.397±0.06 1.819±0.00
ENST00000431687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 6.903±0.00 7.235±0.00 N/A
ENST00000540425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182463 ENST00000329613 N/A N/A N/A N/A N/A N/A N/A 0.525±0.00 1.649±0.00 N/A 0.093±0.00 N/A 0.192±0.12 N/A
ENST00000371497 3.518±0.00 2.075±0.00 0.220±0.00 1.034±0.36 2.466±1.57 2.009±1.57 0.362±0.27 0.549±0.00 0.871±0.19 0.443±0.16 0.582±0.00 2.059±1.27 0.211±0.16 4.208±2.33
ENST00000603338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197670 ENST00000424252 0.257±0.00 N/A N/A 0.225±0.21 0.561±0.00 0.436±0.00 0.176±0.00 0.386±0.00 0.191±0.00 0.179±0.00 0.169±0.10 0.131±0.03 0.061±0.03 0.118±0.04
ENSG00000199218 ENST00000362348 0.054±0.00 0.056±0.00 N/A 0.323±0.00 0.711±0.65 0.195±0.00 N/A 2.723±0.00 0.707±0.66 1.178±0.00 N/A 2.259±0.00 N/A 0.195±0.00
ENSG00000206959 ENST00000384232 N/A N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223492 ENST00000432706 0.067±0.00 0.033±0.00 N/A 0.020±0.00 0.209±0.18 0.517±0.00 N/A N/A 0.050±0.00 0.548±0.00 N/A 0.244±0.22 N/A 0.218±0.10
ENSG00000224530 ENST00000438675 0.294±0.00 0.104±0.00 N/A N/A 2.891±0.00 N/A 0.061±0.00 0.105±0.00 0.389±0.23 0.327±0.03 3.398±0.00 3.161±0.00 N/A N/A
ENSG00000227705 ENST00000435057 0.029±0.00 N/A N/A N/A 0.472±0.00 0.142±0.00 N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.044±0.02
ENSG00000231703 ENST00000436286 0.108±0.00 0.257±0.00 0.176±0.00 0.110±0.00 0.590±0.37 0.225±0.17 0.122±0.00 0.203±0.07 0.268±0.20 0.081±0.00 0.039±0.01 0.173±0.14 0.121±0.07 0.517±0.43
ENSG00000259723 ENST00000558738 N/A 0.038±0.00 0.156±0.00 0.216±0.00 0.143±0.10 1.545±0.00 N/A N/A N/A 0.516±0.33 N/A 1.537±0.68 0.597±0.00 0.809±0.77
ENSG00000271774 ENST00000606932 N/A N/A 1.797±0.00 N/A N/A 4.641±0.00 N/A N/A 8.110±0.00 4.345±0.00 0.750±0.00 1.749±0.00 1.258±0.82 10.321±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052056 ENSMUST00000063710 2.676±0.57 4.947±1.81 4.301±0.09 1.227±0.66 6.369±2.61 2.575±0.39 1.191±0.69 3.013±0.41 1.075±0.40 3.828±0.98 1.211±0.32 3.449±1.60 2.837±0.71 7.792±0.61
ENSMUST00000109155 3.851±1.92 3.087±1.33 0.496±0.00 0.488±0.00 7.371±0.99 1.621±0.00 1.342±0.34 0.794±0.01 0.631±0.34 3.494±1.23 0.383±0.14 3.352±1.34 4.248±0.00 N/A
ENSMUST00000125162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149088 N/A 7.730±0.00 N/A N/A 11.159±0.00 N/A N/A N/A 1.943±0.00 N/A N/A 7.306±0.00 N/A N/A
ENSMUST00000149318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096972 ENSMUST00000180945 N/A N/A N/A N/A 1.602±0.00 N/A N/A N/A N/A N/A 0.822±0.32 N/A 0.315±0.15 N/A
ENSMUST00000181446 22.888±2.46 15.296±1.67 21.256±0.43 8.091±3.23 10.633±3.64 11.181±1.47 3.496±0.64 9.536±0.96 1.802±0.42 5.289±1.50 1.580±0.46 26.846±8.20 1.148±0.53 1.923±1.08

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