C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172586-ENSG00000214655 CGP 9606 10:73782047-73801797
GeneTranscriptPositionBiotype
ENSG00000172586 (CHCHD1)
coiled-coil-helix-coiled-coil-helix domain containing 1 		ENST00000372833 (CHCHD1-001) 73782063-73783652 protein_coding
ENST00000372837 (CHCHD1-002) 73782047-73783371 protein_coding
ENSG00000214655 (ZSWIM8)
zinc finger, SWIM-type containing 8 		ENST00000398706 (ZSWIM8-201) 73785624-73801797 protein_coding
ENST00000412198 (ZSWIM8-015) 73792731-73801792 protein_coding
ENST00000425051 (ZSWIM8-001) 73793884-73796360 processed_transcript
ENST00000431225 (ZSWIM8-020) 73792050-73794943 processed_transcript
ENST00000433366 (ZSWIM8-021) 73785683-73801608 nonsense_mediated_decay
ENST00000446546 (ZSWIM8-013) 73785655-73786679 retained_intron
ENST00000451629 (ZSWIM8-022) 73789502-73790256 processed_transcript
ENST00000466354 (ZSWIM8-003) 73800719-73801793 protein_coding
ENST00000466568 (ZSWIM8-002) 73800907-73801492 processed_transcript
ENST00000487278 (ZSWIM8-011) 73796371-73797450 processed_transcript
ENST00000489234 (ZSWIM8-009) 73794013-73796351 processed_transcript
ENST00000492395 (ZSWIM8-005) 73791324-73801793 nonsense_mediated_decay
ENST00000603114 (ZSWIM8-018) 73785624-73801792 protein_coding
ENST00000603187 (ZSWIM8-014) 73792522-73801792 protein_coding
ENST00000603195 (ZSWIM8-026) 73799310-73800795 processed_transcript
ENST00000603309 (ZSWIM8-025) 73800122-73801432 processed_transcript
ENST00000603409 (ZSWIM8-023) 73799062-73801166 processed_transcript
ENST00000603840 (ZSWIM8-017) 73799633-73800894 processed_transcript
ENST00000604165 (ZSWIM8-024) 73799074-73800935 processed_transcript
ENST00000604524 (ZSWIM8-019) 73785656-73801793 protein_coding
ENST00000604729 (ZSWIM8-027) 73785582-73801792 protein_coding
ENST00000604754 (ZSWIM8-016) 73792759-73801581 protein_coding
ENST00000605216 (ZSWIM8-012) 73785662-73801792 protein_coding
ENSG00000272589 (ZSWIM8-AS1)
ZSWIM8 antisense RNA 1 		ENST00000456638 (ZSWIM8-AS1-001) 73796514-73801399 antisense
ENSG00000272916 (RP11-574K11.31)
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 {ECO:0000313|Ensembl:ENSP00000475031} 		ENST00000603027 (RP11-574K11.31-001) 73796514-73811651 nonsense_mediated_decay
ENST00000603706 (RP11-574K11.31-002) 73797129-73803077 nonsense_mediated_decay
CIL_0001GZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063787-ENSMUSG00000021819 CGP 10090 14:20703027-20723618
GeneTranscriptPositionBiotype
ENSMUSG00000021819 (Zswim8)
zinc finger SWIM-type containing 8 		ENSMUST00000022358 (Zswim8-201) 20707552-20723618 protein_coding
ENSMUSG00000063787 (Chchd1)
coiled-coil-helix-coiled-coil-helix domain containing 1 		ENSMUST00000071215 (Chchd1-201) 20703027-20704417 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GZ_0001ENSG00000172586ENST00000372833ENST00000372837ENSG00000214655ENST00000398706ENST00000412198ENST00000425051ENST00000431225ENST00000433366ENST00000446546ENST00000451629ENST00000466354ENST00000466568ENST00000487278ENST00000489234ENST00000492395ENST00000603114ENST00000603187ENST00000603195ENST00000603309ENST00000603409ENST00000603840ENST00000604165ENST00000604524ENST00000604729ENST00000604754ENST00000605216ENSG00000272589ENST00000456638ENSG00000272916ENST00000603027ENST00000603706CIL_0001GZ_0002ENSMUSG00000021819ENSMUST00000022358ENSMUSG00000063787ENSMUST00000071215
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GZ_0001ENSG00000172586ENST00000372833ENST00000372837ENSG00000214655ENST00000398706ENST00000412198ENST00000425051ENST00000433366ENST00000603114ENST00000604524ENST00000604729ENST00000605216ENSG00000272589ENST00000456638ENSG00000272916ENST00000603027ENST00000603706CIL_0001GZ_0002ENSMUSG00000021819ENSMUST00000022358ENSMUSG00000063787ENSMUST00000071215
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172586 ENST00000372833 6.147±0.00 13.249±0.00 0.497±0.00 6.152±2.68 7.523±6.05 8.167±6.19 7.563±6.15 14.416±11.13 9.933±8.11 5.419±4.81 5.870±3.78 14.716±8.45 23.307±2.09 14.939±4.58
ENST00000372837 N/A 1.207±0.00 N/A 0.644±0.04 0.228±0.00 1.162±0.00 0.215±0.00 0.422±0.00 0.398±0.00 0.438±0.00 3.207±0.00 1.675±0.35 N/A 1.586±0.00
ENSG00000214655 ENST00000398706 N/A N/A N/A N/A N/A 1.558±0.00 N/A 2.741±0.00 2.324±0.00 N/A N/A 3.266±0.00 N/A N/A
ENST00000412198 N/A N/A N/A 1.482±0.00 N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000425051 N/A N/A N/A N/A N/A N/A N/A 16.410±0.00 N/A N/A 5.858±0.00 N/A N/A N/A
ENST00000431225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433366 N/A N/A N/A N/A 3.078±0.48 N/A N/A 7.300±0.00 N/A N/A N/A 3.331±0.00 N/A N/A
ENST00000446546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.931±0.00 4.181±0.00 N/A
ENST00000603187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604524 N/A N/A 2.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604729 8.099±0.00 N/A 2.080±0.00 5.380±0.00 4.303±0.00 2.795±1.87 4.406±0.00 N/A 2.020±0.35 N/A N/A 6.016±2.98 5.139±1.82 N/A
ENST00000604754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.031±0.00 N/A
ENSG00000272589 ENST00000456638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.020±0.00 N/A N/A N/A
ENSG00000272916 ENST00000603027 7.004±0.00 8.838±0.00 N/A N/A 3.987±0.00 1.112±0.00 N/A N/A N/A N/A N/A N/A N/A 7.820±0.00
ENST00000603706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.756±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021819 ENSMUST00000022358 21.341±6.94 28.030±8.40 21.705±3.48 26.450±7.73 21.705±9.47 13.970±5.27 9.803±1.10 14.926±3.18 6.073±3.73 22.247±9.18 5.586±1.23 30.652±8.25 15.955±6.85 23.341±2.20
ENSMUSG00000063787 ENSMUST00000071215 20.681±2.04 7.665±1.93 39.264±1.86 34.045±8.75 15.183±5.27 14.813±4.47 36.713±1.88 27.565±3.58 39.165±23.91 14.450±0.82 100.177±5.32 31.635±22.94 58.171±16.91 19.293±2.46

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