C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125458-ENSG00000189159 CGP 9606 17:75130225-75168281
GeneTranscriptPositionBiotype
ENSG00000125449 (ARMC7)
armadillo repeat containing 7 		ENST00000245543 (ARMC7-001) 75109987-75130265 protein_coding
ENST00000579096 (ARMC7-003) 75114291-75129451 processed_transcript
ENST00000581078 (ARMC7-002) 75109952-75129170 protein_coding
ENST00000582136 (ARMC7-004) 75109978-75114826 protein_coding
ENST00000584947 (ARMC7-006) 75110181-75114830 protein_coding
ENSG00000125458 (NT5C)
5', 3'-nucleotidase, cytosolic 		ENST00000245552 (NT5C-001) 75130228-75131795 protein_coding
ENST00000577523 (NT5C-012) 75130363-75131425 retained_intron
ENST00000578095 (NT5C-016) 75130571-75131757 retained_intron
ENST00000578337 (NT5C-009) 75130568-75131321 protein_coding
ENST00000578407 (NT5C-014) 75130230-75131683 protein_coding
ENST00000579023 (NT5C-006) 75130546-75131730 retained_intron
ENST00000579082 (NT5C-007) 75130788-75131714 processed_transcript
ENST00000580423 (NT5C-010) 75130332-75131258 protein_coding
ENST00000580758 (NT5C-003) 75130228-75131743 nonsense_mediated_decay
ENST00000582160 (NT5C-013) 75130225-75131446 protein_coding
ENST00000582170 (NT5C-015) 75130473-75131744 protein_coding
ENST00000582744 (NT5C-008) 75130271-75131473 nonsense_mediated_decay
ENST00000583655 (NT5C-002) 75130228-75131749 retained_intron
ENST00000584352 (NT5C-011) 75130436-75131048 retained_intron
ENSG00000188612 (SUMO2)
small ubiquitin-like modifier 2 		ENST00000314523 (SUMO2-002) 75167868-75182956 protein_coding
ENST00000420826 (SUMO2-001) 75165586-75182983 protein_coding
ENST00000578238 (SUMO2-003) 75168298-75182563 protein_coding
ENSG00000252042 (Y_RNA)
Y RNA 		ENST00000516233 (Y_RNA.1-872) 75145670-75145762 misc_RNA
ENSG00000263786 (RP11-649A18.4)
 ENST00000579554 (RP11-649A18.4-001) 75145261-75146546 sense_intronic
ENSG00000265800 (RP11-649A18.5)
 ENST00000584339 (RP11-649A18.5-001) 75138416-75141350 sense_intronic
ENSG00000279035 (RP11-649A18.3)
 ENST00000625094 (RP11-649A18.3-001) 75130883-75133043 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0001JI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020736-ENSMUSG00000020737 CGP 10090 11:115490420-115514387
GeneTranscriptPositionBiotype
ENSMUSG00000020736 (Nt5c)
5',3'-nucleotidase, cytosolic 		ENSMUST00000021082 (Nt5c-001) 115490420-115491862 protein_coding
ENSMUST00000106530 (Nt5c-003) 115490420-115491815 protein_coding
ENSMUST00000124778 (Nt5c-002) 115490638-115491851 retained_intron
ENSMUST00000125940 (Nt5c-004) 115490700-115491202 retained_intron
ENSMUST00000130668 (Nt5c-005) 115490771-115491371 retained_intron
ENSMUSG00000020737 (Hn1)
hematological and neurological expressed sequence 1 		ENSMUST00000021083 (Hn1-001) 115497353-115514387 protein_coding
ENSMUST00000139980 (Hn1-004) 115498032-115514148 processed_transcript
ENSMUST00000142238 (Hn1-005) 115503033-115514116 processed_transcript
ENSMUST00000145104 (Hn1-003) 115498131-115514348 processed_transcript
ENSMUST00000155399 (Hn1-002) 115500382-115514371 processed_transcript
ENSMUSG00000057219 (Armc7)
armadillo repeat containing 7 		ENSMUST00000035240 (Armc7-001) 115475667-115490467 protein_coding
ENSMUST00000126533 (Armc7-003) 115475742-115485286 processed_transcript
ENSMUST00000136985 (Armc7-002) 115475698-115483777 processed_transcript
ENSMUST00000140181 (Armc7-004) 115475954-115489062 processed_transcript
ENSMUSG00000081376 (Gm11694)
predicted gene 11694 		ENSMUST00000118637 (Gm11694-001) 115493024-115493182 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JI_0001ENSG00000125449ENST00000245543ENST00000581078ENST00000582136ENSG00000125458ENST00000245552ENST00000577523ENST00000578337ENST00000578407ENST00000580423ENST00000580758ENST00000582160ENST00000584352ENSG00000188612ENST00000314523ENST00000420826ENST00000578238ENSG00000252042ENST00000516233ENSG00000263786ENST00000579554ENSG00000265800ENST00000584339ENSG00000279035ENST00000625094CIL_0001JI_0002ENSMUSG00000020736ENSMUST00000021082ENSMUST00000124778ENSMUST00000125940ENSMUST00000130668ENSMUSG00000020737ENSMUST00000021083ENSMUST00000139980ENSMUST00000155399ENSMUSG00000057219ENSMUST00000035240ENSMUST00000126533ENSMUSG00000081376ENSMUST00000118637
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125449 ENST00000245543 2.055±0.00 4.635±0.00 N/A 1.002±0.00 N/A 2.703±0.00 1.995±0.00 4.533±0.00 3.568±0.00 5.568±0.00 1.924±0.00 6.768±0.94 7.114±1.82 4.059±0.00
ENST00000579096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581078 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A
ENST00000582136 N/A N/A N/A 2.069±0.00 N/A N/A N/A N/A 2.013±0.00 N/A N/A N/A N/A N/A
ENST00000584947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125458 ENST00000245552 18.790±0.00 28.352±0.00 N/A 6.824±3.98 16.713±0.00 11.299±4.19 3.358±2.10 26.991±0.00 8.652±0.00 19.605±0.00 9.934±3.60 39.856±14.24 27.050±4.27 16.139±3.27
ENST00000577523 N/A N/A 0.968±0.00 N/A N/A N/A N/A 5.359±0.00 1.630±0.00 N/A 1.157±0.00 4.691±0.00 N/A N/A
ENST00000578095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578337 N/A N/A N/A N/A N/A N/A N/A N/A 1.020±0.00 N/A N/A N/A N/A N/A
ENST00000578407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.777±0.00 N/A N/A
ENST00000579023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.453±0.00 N/A N/A
ENST00000580758 N/A N/A N/A N/A N/A 2.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582160 N/A N/A 1.265±0.00 N/A 1.553±0.00 N/A N/A N/A 1.858±0.00 0.976±0.00 N/A 2.093±0.00 N/A N/A
ENST00000582170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584352 N/A N/A 1.119±0.00 N/A 1.258±0.00 N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A
ENSG00000188612 ENST00000314523 69.209±0.00 75.925±0.00 N/A 32.947±15.18 69.370±0.00 92.289±0.00 3.432±0.00 36.020±27.38 29.835±0.00 116.448±0.00 27.174±23.42 60.203±48.07 66.537±6.04 115.259±0.00
ENST00000420826 5.373±0.00 8.024±0.00 5.550±0.00 8.142±0.42 5.550±0.71 6.659±3.33 3.322±0.00 7.663±0.77 6.097±2.00 11.617±4.91 4.280±1.79 20.148±12.25 12.814±0.00 15.347±0.00
ENST00000578238 56.443±0.00 68.870±0.00 26.849±0.00 44.572±0.00 38.392±18.58 51.569±29.01 5.923±0.00 45.254±0.00 25.926±0.02 14.747±0.00 30.148±14.05 111.458±26.09 N/A 103.544±19.91
ENSG00000252042 ENST00000516233 N/A 0.651±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263786 ENST00000579554 0.080±0.00 0.358±0.00 0.484±0.00 0.274±0.01 0.692±0.44 0.133±0.00 0.572±0.00 0.367±0.00 0.081±0.00 0.373±0.00 N/A 0.265±0.13 0.099±0.04 0.051±0.01
ENSG00000265800 ENST00000584339 0.838±0.00 0.861±0.00 N/A 0.703±0.04 0.586±0.00 0.212±0.00 0.290±0.00 0.623±0.00 0.337±0.00 1.532±0.00 0.067±0.00 0.482±0.08 0.250±0.07 0.649±0.32
ENSG00000279035 ENST00000625094 1.826±0.00 4.431±0.00 N/A 0.933±0.40 1.284±0.90 1.304±0.00 1.199±0.00 N/A N/A 1.733±1.37 1.375±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020736 ENSMUST00000021082 26.271±1.73 33.712±6.06 29.437±1.47 22.640±5.22 19.868±7.52 54.055±3.46 3.806±0.67 20.086±0.59 18.137±6.12 22.379±0.78 3.783±1.14 34.511±8.41 13.084±4.04 12.280±3.81
ENSMUST00000106530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124778 N/A N/A 5.681±0.92 6.509±0.44 N/A N/A 1.308±0.00 N/A 4.887±0.18 N/A N/A N/A 2.331±0.00 N/A
ENSMUST00000125940 N/A N/A N/A N/A 12.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130668 N/A N/A N/A 35.755±0.00 N/A N/A N/A N/A N/A N/A N/A 68.997±0.00 17.581±3.02 39.244±0.00
ENSMUSG00000020737 ENSMUST00000021083 69.844±3.83 35.167±14.33 43.658±5.53 393.902±264.32 94.202±21.58 207.536±38.17 42.582±7.48 28.130±0.94 65.886±60.85 66.209±1.48 19.079±2.43 92.799±32.94 52.722±31.52 116.334±52.83
ENSMUST00000139980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.786±2.17 183.265±25.93
ENSMUST00000142238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155399 N/A 44.059±5.92 N/A N/A N/A N/A N/A N/A 5.317±0.00 N/A N/A N/A N/A 96.715±0.00
ENSMUSG00000057219 ENSMUST00000035240 2.739±0.36 5.028±0.63 2.875±0.04 3.556±1.14 6.441±2.60 5.470±0.51 0.815±0.20 2.400±0.17 1.598±0.27 3.962±0.26 0.643±0.15 4.631±1.13 3.110±1.45 1.487±0.23
ENSMUST00000126533 N/A N/A N/A N/A 16.389±2.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081376 ENSMUST00000118637 N/A N/A N/A 28.261±0.00 N/A N/A N/A N/A N/A N/A N/A 25.502±0.00 11.351±6.21 22.661±0.00

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