C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145901-ENSG00000197043 CGP 9606 5:151029945-151157882
GeneTranscriptPositionBiotype
ENSG00000145901 (TNIP1)
TNFAIP3 interacting protein 1 		ENST00000315050 (TNIP1-002) 151029949-151087158 protein_coding
ENST00000389378 (TNIP1-201) 151029947-151081084 protein_coding
ENST00000517329 (TNIP1-015) 151034496-151035654 retained_intron
ENST00000517504 (TNIP1-018) 151029949-151039198 protein_coding
ENST00000518977 (TNIP1-005) 151030581-151081074 protein_coding
ENST00000519339 (TNIP1-009) 151030581-151063747 nonsense_mediated_decay
ENST00000520695 (TNIP1-012) 151060322-151081034 protein_coding
ENST00000520931 (TNIP1-006) 151029945-151081016 protein_coding
ENST00000521001 (TNIP1-011) 151060354-151093577 protein_coding
ENST00000521423 (TNIP1-014) 151032050-151049903 processed_transcript
ENST00000521591 (TNIP1-004) 151030581-151081074 protein_coding
ENST00000521782 (TNIP1-016) 151042898-151046361 retained_intron
ENST00000522100 (TNIP1-010) 151045866-151087166 protein_coding
ENST00000522226 (TNIP1-001) 151030492-151087660 protein_coding
ENST00000522574 (TNIP1-017) 151030484-151037438 retained_intron
ENST00000522926 (TNIP1-013) 151078403-151081015 processed_transcript
ENST00000523200 (TNIP1-007) 151030689-151065095 protein_coding
ENST00000523338 (TNIP1-003) 151029949-151087158 protein_coding
ENST00000524280 (TNIP1-008) 151030619-151065095 protein_coding
ENST00000610535 (TNIP1-202) 151029947-151081084 protein_coding
ENST00000610874 (TNIP1-203) 151029947-151081084 protein_coding
ENSG00000197043 (ANXA6)
annexin A6 		ENST00000354546 (ANXA6-001) 151101105-151157882 protein_coding
ENST00000377751 (ANXA6-003) 151101109-151157752 protein_coding
ENST00000517486 (ANXA6-010) 151101480-151157747 protein_coding
ENST00000517677 (ANXA6-009) 151129460-151157765 nonsense_mediated_decay
ENST00000517707 (ANXA6-015) 151126445-151133323 retained_intron
ENST00000517757 (ANXA6-008) 151136260-151157765 protein_coding
ENST00000519610 (ANXA6-011) 151154885-151157761 processed_transcript
ENST00000519644 (ANXA6-007) 151119374-151157767 nonsense_mediated_decay
ENST00000520054 (ANXA6-014) 151122221-151128371 retained_intron
ENST00000520378 (ANXA6-005) 151137213-151157785 retained_intron
ENST00000521512 (ANXA6-002) 151101144-151157760 protein_coding
ENST00000521749 (ANXA6-013) 151134427-151141655 protein_coding
ENST00000522664 (ANXA6-016) 151100712-151105272 protein_coding
ENST00000523164 (ANXA6-012) 151137309-151151479 protein_coding
ENST00000523714 (ANXA6-004) 151101109-151141640 protein_coding
CIL_0001KR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020400-ENSMUSG00000018340 CGP 10090 11:54910785-55033445
GeneTranscriptPositionBiotype
ENSMUSG00000018340 (Anxa6)
annexin A6 		ENSMUST00000102727 (Anxa6-002) 54979108-55033445 protein_coding
ENSMUST00000108883 (Anxa6-001) 54979108-55033445 protein_coding
ENSMUST00000148298 (Anxa6-003) 54990950-55033415 processed_transcript
ENSMUSG00000020400 (Tnip1)
TNFAIP3 interacting protein 1 		ENSMUST00000018482 (Tnip1-001) 54910787-54962912 protein_coding
ENSMUST00000102730 (Tnip1-007) 54910787-54962910 protein_coding
ENSMUST00000102731 (Tnip1-003) 54910787-54962917 protein_coding
ENSMUST00000108885 (Tnip1-008) 54910789-54962909 protein_coding
ENSMUST00000108886 (Tnip1-002) 54910787-54962916 protein_coding
ENSMUST00000108889 (Tnip1-201) 54910785-54956122 protein_coding
ENSMUST00000124304 (Tnip1-006) 54910787-54956104 processed_transcript
ENSMUST00000126703 (Tnip1-004) 54926704-54956122 protein_coding
ENSMUST00000132224 (Tnip1-011) 54918611-54921075 retained_intron
ENSMUST00000132776 (Tnip1-010) 54940613-54962909 processed_transcript
ENSMUST00000151736 (Tnip1-009) 54940559-54956087 processed_transcript
ENSMUST00000155316 (Tnip1-005) 54934013-54956047 protein_coding
ENSMUSG00000082180 (Gm12230)
predicted gene 12230 		ENSMUST00000118301 (Gm12230-001) 54947435-54947888 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KR_0001ENSG00000145901ENST00000315050ENST00000389378ENST00000517504ENST00000518977ENST00000520931ENST00000521591ENST00000522100ENST00000523200ENST00000523338ENST00000524280ENST00000610535ENST00000610874ENSG00000197043ENST00000354546ENST00000517707ENST00000519644ENST00000520054ENST00000521512ENST00000523714CIL_0001KR_0002ENSMUSG00000018340ENSMUST00000102727ENSMUST00000108883ENSMUSG00000020400ENSMUST00000018482ENSMUST00000102730ENSMUST00000108886ENSMUST00000108889ENSMUST00000124304ENSMUST00000126703ENSMUSG00000082180ENSMUST00000118301
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145901 ENST00000315050 N/A N/A N/A N/A 2.001±0.00 N/A 8.295±0.00 N/A N/A 12.697±10.73 10.046±0.00 8.412±1.91 10.701±3.79 2.418±0.00
ENST00000389378 N/A 8.431±0.00 N/A N/A 10.423±8.79 N/A 10.308±8.16 N/A 4.353±0.00 26.106±0.00 N/A 5.902±0.87 5.363±0.24 5.583±0.00
ENST00000517329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.535±0.00 28.368±0.00 12.498±0.00
ENST00000518977 N/A N/A 4.571±0.00 N/A N/A 4.857±0.00 1.716±0.00 6.327±0.00 N/A 2.067±0.00 N/A N/A N/A N/A
ENST00000519339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520931 24.028±0.00 20.924±0.00 N/A 11.479±0.00 61.467±0.00 28.674±0.00 15.325±0.00 21.607±0.00 17.489±0.00 40.622±0.00 53.434±0.00 10.354±5.43 6.556±2.01 7.959±5.20
ENST00000521001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521591 N/A N/A 2.881±0.00 2.663±0.00 4.570±0.00 N/A 2.294±0.00 6.071±0.00 5.637±0.00 2.438±0.00 4.419±0.00 6.134±2.63 6.875±0.00 4.495±0.00
ENST00000521782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.099±0.00 N/A
ENST00000522226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523200 N/A N/A 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523338 18.382±0.00 20.978±0.00 N/A 3.831±1.59 49.939±0.00 23.748±0.00 N/A 12.674±0.00 6.235±0.00 11.838±9.90 21.071±0.00 1.936±0.00 3.933±0.00 10.876±0.00
ENST00000524280 N/A N/A N/A N/A 5.491±0.00 6.436±0.00 1.894±0.00 N/A N/A 2.412±0.00 N/A 3.801±0.00 N/A N/A
ENST00000610535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.836±0.00 N/A N/A N/A
ENST00000610874 17.908±0.00 N/A N/A N/A 23.308±0.00 N/A N/A 12.346±0.00 9.530±0.00 N/A 19.127±0.00 N/A N/A N/A
ENSG00000197043 ENST00000354546 84.485±0.00 97.609±0.00 3.652±0.00 52.958±12.48 103.918±84.70 45.286±35.11 38.321±26.63 46.124±16.07 44.625±21.49 47.847±37.33 75.070±59.91 71.611±53.37 93.715±25.87 35.949±18.60
ENST00000377751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.834±0.00 105.653±0.00 25.789±0.00
ENST00000517757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.235±0.00 96.847±0.00 16.496±0.00
ENST00000520054 N/A N/A N/A 55.208±0.00 N/A 17.100±0.00 N/A N/A 40.045±0.00 N/A N/A 30.370±0.00 N/A N/A
ENST00000520378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521512 N/A 33.609±0.00 N/A N/A 39.308±0.00 35.830±0.00 N/A 17.751±0.00 35.493±0.00 26.222±0.00 N/A 26.254±10.15 27.404±3.98 15.135±0.00
ENST00000521749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523714 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.770±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018340 ENSMUST00000102727 55.744±9.71 15.512±4.73 28.706±0.92 5.699±0.66 39.557±8.23 12.374±4.51 24.817±4.48 21.521±1.98 17.782±6.42 43.735±5.82 12.668±1.37 49.156±11.31 23.659±12.79 1.695±0.77
ENSMUST00000108883 133.717±26.03 31.640±9.09 71.974±1.05 13.261±4.44 75.079±7.90 26.745±5.43 45.098±3.59 21.558±3.17 24.022±7.53 55.896±3.78 57.664±2.73 62.094±10.30 26.170±9.17 1.367±0.82
ENSMUST00000148298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020400 ENSMUST00000018482 1.368±0.03 N/A N/A 1.046±0.00 1.410±0.00 N/A 1.706±0.35 1.586±0.00 0.790±0.09 N/A N/A 7.078±2.34 2.714±0.00 0.655±0.20
ENSMUST00000102730 3.996±1.68 N/A 5.165±1.75 2.612±0.00 6.490±0.00 8.846±1.93 2.943±0.97 3.753±0.40 0.976±0.40 4.601±2.40 3.596±0.83 10.066±4.17 7.583±4.60 0.658±0.00
ENSMUST00000102731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108886 3.302±1.83 6.122±2.36 1.928±0.16 1.035±0.22 6.776±2.90 10.399±3.92 3.866±1.08 4.223±0.70 0.748±0.25 3.729±0.48 2.696±0.00 14.301±6.69 7.462±5.72 0.478±0.07
ENSMUST00000108889 2.277±0.10 4.778±0.50 2.395±0.22 2.249±2.27 N/A 8.508±0.55 N/A 1.876±0.54 1.110±0.26 3.579±0.01 3.736±0.70 5.293±0.41 2.820±0.57 0.796±0.25
ENSMUST00000124304 N/A N/A N/A 11.961±0.00 N/A N/A N/A N/A N/A N/A N/A 36.654±0.00 11.231±6.11 4.138±0.00
ENSMUST00000126703 3.883±0.00 9.611±0.66 N/A 1.713±0.00 11.694±3.32 22.710±4.42 N/A N/A 1.595±0.40 7.567±0.53 N/A 11.806±1.06 N/A 1.160±0.00
ENSMUST00000132224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082180 ENSMUST00000118301 0.236±0.12 N/A 0.094±0.07 0.099±0.00 0.353±0.03 0.317±0.09 0.108±0.00 0.279±0.05 0.038±0.01 0.345±0.10 N/A 0.421±0.24 0.352±0.32 0.121±0.00

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