C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001LX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016753-ENSDARG00000006307 CGP 7955 11:25785230-25819276
GeneTranscriptPositionBiotype
ENSDARG00000006307 (shisa4)
shisa homolog 4 (Xenopus laevis)
ENSDART00000006038 (shisa4-001) 25811379-25819276 protein_coding
ENSDARG00000016753 (ipo9)
importin 9
ENSDART00000011534 (ipo9-001) 25785230-25808986 protein_coding
ENSDART00000115279 (ipo9-201) 25785230-25808985 protein_coding
CIL_0001LX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198700-ENSG00000198892 CGP 9606 1:201829141-201892306
GeneTranscriptPositionBiotype
ENSG00000198700 (IPO9)
importin 9
ENST00000361565 (IPO9-001) 201829141-201884294 protein_coding
ENST00000456707 (IPO9-003) 201874315-201876373 protein_coding
ENST00000464348 (IPO9-004) 201829149-201853073 processed_transcript
ENST00000479374 (IPO9-002) 201847295-201850816 processed_transcript
ENSG00000198892 (SHISA4)
shisa family member 4
ENST00000362011 (SHISA4-001) 201888708-201892306 protein_coding
ENST00000464117 (SHISA4-002) 201888680-201892137 processed_transcript
ENST00000481699 (SHISA4-003) 201888934-201890493 processed_transcript
ENSG00000277681 (MIR6739)
microRNA 6739
ENST00000622461 (MIR6739-201) 201863373-201863447 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LX_0001ENSDARG00000006307ENSDART00000006038ENSDARG00000016753ENSDART00000011534ENSDART00000115279CIL_0001LX_0002ENSG00000198700ENST00000361565ENST00000456707ENST00000464348ENST00000479374ENSG00000198892ENST00000362011ENST00000464117ENST00000481699ENSG00000277681ENST00000622461
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LX_0001ENSDARG00000006307ENSDART00000006038ENSDARG00000016753ENSDART00000011534ENSDART00000115279CIL_0001LX_0002ENSG00000198700ENST00000361565ENST00000456707ENST00000464348ENSG00000198892ENST00000362011ENST00000464117ENSG00000277681ENST00000622461
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006307 ENSDART00000006038 N/A N/A N/A 9.367±0.00 N/A N/A 1.960±0.62 0.362±0.08 0.034±0.00 N/A 2.335±0.00 N/A N/A N/A
ENSDARG00000016753 ENSDART00000011534 N/A N/A N/A 7.945±2.60 N/A N/A 4.108±1.88 4.695±0.00 0.688±0.00 N/A 1.252±0.00 N/A N/A N/A
ENSDART00000115279 N/A N/A N/A N/A N/A N/A N/A N/A 1.801±0.00 N/A 2.108±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000198700 ENST00000361565 3.498±0.00 3.996±0.00 N/A 2.562±0.00 2.605±0.84 2.118±0.47 2.093±0.93 2.693±1.47 2.023±0.38 2.691±0.00 1.640±1.00 3.641±1.12 4.107±0.55 3.594±0.88
ENST00000456707 N/A N/A N/A N/A N/A N/A N/A N/A 11.046±0.00 N/A N/A N/A N/A N/A
ENST00000464348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.640±0.00 N/A N/A N/A
ENST00000479374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198892 ENST00000362011 6.840±0.00 4.024±0.00 0.552±0.00 35.214±25.46 6.942±0.00 9.189±0.00 46.929±0.00 4.871±2.97 1.112±0.60 3.861±3.29 48.018±9.25 6.388±7.23 4.663±0.89 8.823±4.38
ENST00000464117 4.565±0.00 1.969±0.00 N/A 29.875±0.00 9.109±0.00 3.337±0.00 15.016±0.00 3.618±0.00 0.394±0.00 1.020±0.00 23.322±0.00 4.625±4.11 3.834±1.53 5.377±1.39
ENST00000481699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277681 ENST00000622461 N/A 4.076±0.00 N/A N/A 0.347±0.00 N/A 0.355±0.00 N/A N/A N/A N/A N/A N/A 1.091±0.78

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