C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031782-ENSDARG00000031366 CGP 7955 17:25323156-25405537
GeneTranscriptPositionBiotype
ENSDARG00000031366 (rtn4ip1)
reticulon 4 interacting protein 1 		ENSDART00000040032 (rtn4ip1-001) 25391925-25405537 protein_coding
ENSDARG00000031782 (aim1a)
absent in melanoma 1a 		ENSDART00000041721 (aim1a-201) 25369335-25390628 protein_coding
ENSDART00000132759 (aim1a-002) 25387822-25390832 retained_intron
ENSDART00000139451 (aim1a-001) 25323156-25391939 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001OY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112297-ENSG00000130347 CGP 9606 6:106511855-106629487
GeneTranscriptPositionBiotype
ENSG00000112297 (AIM1)
absent in melanoma 1 		ENST00000369066 (AIM1-001) 106511855-106570451 protein_coding
ENST00000457437 (AIM1-002) 106541134-106555897 protein_coding
ENST00000487681 (AIM1-003) 106544584-106552314 processed_transcript
ENSG00000130347 (RTN4IP1)
reticulon 4 interacting protein 1 		ENST00000369063 (RTN4IP1-001) 106571971-106629487 protein_coding
ENST00000493619 (RTN4IP1-002) 106571977-106572411 processed_transcript
ENST00000498091 (RTN4IP1-003) 106571975-106583631 processed_transcript
ENST00000539449 (RTN4IP1-201) 106572003-106629021 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OY_0001ENSDARG00000031366ENSDART00000040032ENSDARG00000031782ENSDART00000041721ENSDART00000132759ENSDART00000139451CIL_0001OY_0002ENSG00000112297ENST00000369066ENST00000457437ENST00000487681ENSG00000130347ENST00000369063ENST00000493619ENST00000498091ENST00000539449
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OY_0001ENSDARG00000031366ENSDART00000040032ENSDARG00000031782ENSDART00000041721ENSDART00000139451CIL_0001OY_0002ENSG00000112297ENST00000369066ENST00000457437ENST00000487681ENSG00000130347ENST00000369063ENST00000493619ENST00000498091ENST00000539449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031366 ENSDART00000040032 N/A N/A N/A 7.373±0.69 N/A N/A 10.327±1.96 7.428±0.00 0.966±0.00 N/A 3.511±0.00 N/A N/A N/A
ENSDARG00000031782 ENSDART00000041721 N/A N/A N/A N/A N/A N/A 1.449±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139451 N/A N/A N/A 0.472±0.22 N/A N/A 0.865±0.23 0.991±0.19 0.046±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112297 ENST00000369066 4.098±0.00 N/A 1.497±0.00 0.215±0.00 4.034±0.87 5.679±3.00 0.331±0.15 3.098±1.48 1.926±0.96 3.197±0.39 0.151±0.08 2.650±2.11 9.605±3.74 4.981±0.16
ENST00000457437 N/A N/A 3.644±0.00 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A
ENST00000487681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A N/A N/A
ENSG00000130347 ENST00000369063 1.122±0.00 3.233±0.00 1.413±0.00 3.626±0.65 2.781±0.00 2.465±1.35 4.324±2.01 3.359±1.74 2.473±1.25 0.272±0.07 1.789±0.35 3.018±1.45 2.452±0.87 5.185±0.64
ENST00000493619 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A N/A N/A N/A
ENST00000498091 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A
ENST00000539449 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A

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