C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001P1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013379-ENSDARG00000006921 CGP 7955 25:10813336-10981755
GeneTranscriptPositionBiotype
ENSDARG00000006921 (lrp5)
low density lipoprotein receptor-related protein 5 		ENSDART00000121724 (lrp5-201) 10854422-10981755 protein_coding
ENSDARG00000039882 (ap3s2)
adaptor-related protein complex 3, sigma 2 subunit 		ENSDART00000058339 (ap3s2-001) 11006557-11016611 protein_coding
ENSDART00000131231 (ap3s2-004) 10975095-11008397 protein_coding
ENSDART00000133297 (ap3s2-002) 11006578-11008883 retained_intron
ENSDART00000134923 (ap3s2-003) 11006572-11016547 protein_coding
CIL_0001P1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024908-ENSMUSG00000024913 CGP 10090 19:3454933-3686564
GeneTranscriptPositionBiotype
ENSMUSG00000024908 (Ppp6r3)
protein phosphatase 6, regulatory subunit 3 		ENSMUST00000025846 (Ppp6r3-201) 3454933-3575749 protein_coding
ENSMUST00000113997 (Ppp6r3-202) 3454933-3575749 protein_coding
ENSMUST00000172362 (Ppp6r3-203) 3454933-3575749 protein_coding
ENSMUSG00000024913 (Lrp5)
low density lipoprotein receptor-related protein 5 		ENSMUST00000025856 (Lrp5-001) 3584828-3686556 protein_coding
ENSMUST00000176867 (Lrp5-003) 3621671-3686564 protein_coding
ENSMUST00000177294 (Lrp5-004) 3584836-3615792 nonsense_mediated_decay
ENSMUST00000177330 (Lrp5-002) 3584831-3686561 nonsense_mediated_decay
ENSMUSG00000075908 (Gm23940)
predicted gene, 23940 		ENSMUST00000101958 (Gm23940-201) 3490309-3490413 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P1_0001ENSDARG00000006921ENSDART00000121724ENSDARG00000039882ENSDART00000058339ENSDART00000131231ENSDART00000133297ENSDART00000134923CIL_0001P1_0002ENSMUSG00000024908ENSMUST00000025846ENSMUST00000113997ENSMUST00000172362ENSMUSG00000024913ENSMUST00000025856ENSMUST00000176867ENSMUST00000177294ENSMUST00000177330ENSMUSG00000075908ENSMUST00000101958
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P1_0001ENSDARG00000006921ENSDART00000121724ENSDARG00000039882ENSDART00000058339ENSDART00000134923CIL_0001P1_0002ENSMUSG00000024908ENSMUST00000025846ENSMUST00000113997ENSMUST00000172362ENSMUSG00000024913ENSMUST00000025856ENSMUST00000177294ENSMUST00000177330ENSMUSG00000075908ENSMUST00000101958
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006921 ENSDART00000121724 N/A N/A N/A 1.054±0.05 N/A N/A 3.791±1.85 3.280±2.09 3.314±0.00 N/A 1.797±0.00 N/A N/A N/A
ENSDARG00000039882 ENSDART00000058339 N/A N/A N/A 35.838±13.24 N/A N/A 9.520±3.55 11.045±1.55 0.514±0.00 N/A 2.320±0.00 N/A N/A N/A
ENSDART00000131231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134923 N/A N/A N/A 7.436±2.88 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024908 ENSMUST00000025846 N/A 5.301±0.00 2.979±0.33 4.605±0.98 N/A N/A 1.890±0.00 N/A 4.158±1.69 N/A 4.744±1.36 4.346±0.94 2.343±0.00 2.423±1.00
ENSMUST00000113997 5.157±0.72 14.530±3.73 9.306±2.65 13.612±1.02 8.638±3.25 8.385±3.03 6.756±3.43 8.123±3.33 10.517±5.61 13.826±3.85 7.298±2.38 12.077±7.70 9.146±3.39 8.376±3.11
ENSMUST00000172362 N/A 23.523±11.55 N/A 3.161±1.32 4.642±0.30 N/A N/A 12.926±0.00 4.175±1.12 5.368±1.08 1.839±0.26 9.664±5.68 2.730±0.40 1.496±0.05
ENSMUSG00000024913 ENSMUST00000025856 7.786±4.78 29.319±7.90 2.797±0.81 0.939±0.31 7.761±3.34 11.137±4.37 4.666±1.73 6.276±2.46 6.299±3.21 20.534±5.51 4.222±0.37 13.337±5.70 17.055±12.26 N/A
ENSMUST00000176867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177294 5.230±0.96 N/A 1.698±0.00 0.813±0.53 5.237±0.48 5.241±1.80 3.892±0.28 3.465±0.19 1.762±0.40 8.278±0.15 1.235±0.00 6.906±1.00 N/A 3.744±0.08
ENSMUST00000177330 N/A N/A 0.366±0.10 N/A N/A N/A N/A N/A 0.393±0.01 N/A N/A 1.132±0.43 N/A N/A
ENSMUSG00000075908 ENSMUST00000101958 N/A N/A 77.302±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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