C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Q1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186951-ENSG00000205643 CGP 9606 22:46150521-46250679
GeneTranscriptPositionBiotype
ENSG00000186951 (PPARA)
peroxisome proliferator-activated receptor alpha 		ENST00000262735 (PPARA-201) 46150596-46243756 protein_coding
ENST00000402126 (PPARA-008) 46176748-46235403 protein_coding
ENST00000407236 (PPARA-001) 46151884-46243755 protein_coding
ENST00000415785 (PPARA-009) 46150552-46198591 protein_coding
ENST00000420804 (PPARA-003) 46150606-46215364 protein_coding
ENST00000440343 (PPARA-002) 46150521-46198410 protein_coding
ENST00000460086 (PPARA-004) 46150828-46151970 processed_transcript
ENST00000481567 (PPARA-006) 46171332-46198410 processed_transcript
ENST00000484619 (PPARA-007) 46171284-46198410 processed_transcript
ENST00000493286 (PPARA-005) 46176766-46220657 retained_intron
ENST00000496865 (PPARA-010) 46151886-46156593 processed_transcript
ENST00000624793 (PPARA-011) 46154997-46156552 retained_intron
ENSG00000205643 (CDPF1)
cysteine-rich, DPF motif domain containing 1 		ENST00000314567 (CDPF1-001) 46244013-46250679 protein_coding
ENST00000381037 (CDPF1-002) 46244021-46250289 nonsense_mediated_decay
ENST00000404583 (CDPF1-003) 46244011-46248285 protein_coding
ENST00000404744 (CDPF1-004) 46244051-46248285 protein_coding
ENST00000474256 (CDPF1-005) 46244909-46250311 processed_transcript
ENST00000475605 (CDPF1-006) 46244623-46250294 processed_transcript
ENSG00000280384 (RP4-695O20.1)
 ENST00000624818 (RP4-695O20.1-001) 46163303-46165347 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0001Q1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022383-ENSMUSG00000064284 CGP 10090 15:85734983-85811697
GeneTranscriptPositionBiotype
ENSMUSG00000022383 (Ppara)
peroxisome proliferator activated receptor alpha 		ENSMUST00000057979 (Ppara-003) 85736131-85801748 protein_coding
ENSMUST00000109422 (Ppara-001) 85735776-85802819 protein_coding
ENSMUST00000109423 (Ppara-002) 85735564-85802163 protein_coding
ENSMUST00000134880 (Ppara-005) 85734983-85777632 processed_transcript
ENSMUST00000136453 (Ppara-006) 85772214-85777767 processed_transcript
ENSMUST00000138813 (Ppara-004) 85735639-85777727 processed_transcript
ENSMUSG00000064284 (Cdpf1)
cysteine rich, DPF motif domain containing 1 		ENSMUST00000071876 (Cdpf1-001) 85806972-85811696 protein_coding
ENSMUST00000125947 (Cdpf1-003) 85807247-85811090 protein_coding
ENSMUST00000134631 (Cdpf1-004) 85807200-85811654 protein_coding
ENSMUST00000144067 (Cdpf1-005) 85807244-85811644 protein_coding
ENSMUST00000150995 (Cdpf1-002) 85807257-85811697 protein_coding
ENSMUST00000154814 (Cdpf1-006) 85808228-85811659 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Q1_0001ENSG00000186951ENST00000262735ENST00000402126ENST00000407236ENST00000415785ENST00000420804ENST00000440343ENST00000460086ENST00000481567ENST00000484619ENST00000493286ENST00000496865ENST00000624793ENSG00000205643ENST00000314567ENST00000381037ENST00000404583ENST00000404744ENST00000474256ENST00000475605ENSG00000280384ENST00000624818CIL_0001Q1_0002ENSMUSG00000022383ENSMUST00000057979ENSMUST00000109422ENSMUST00000109423ENSMUST00000134880ENSMUST00000136453ENSMUST00000138813ENSMUSG00000064284ENSMUST00000071876ENSMUST00000125947ENSMUST00000134631ENSMUST00000144067ENSMUST00000150995ENSMUST00000154814
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Q1_0001ENSG00000186951ENST00000262735ENST00000402126ENST00000407236ENSG00000205643ENST00000314567ENST00000381037ENST00000404583ENST00000404744ENST00000474256ENST00000475605ENSG00000280384ENST00000624818CIL_0001Q1_0002ENSMUSG00000022383ENSMUST00000057979ENSMUST00000109422ENSMUST00000109423ENSMUST00000136453ENSMUST00000138813ENSMUSG00000064284ENSMUST00000071876ENSMUST00000144067ENSMUST00000150995ENSMUST00000154814
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186951 ENST00000262735 2.604±0.00 N/A N/A 1.764±0.00 1.601±0.00 1.715±0.25 5.483±4.24 8.693±0.00 11.403±0.00 1.028±0.00 4.669±0.00 0.935±0.24 0.503±0.15 1.562±0.00
ENST00000402126 N/A N/A N/A N/A N/A N/A 4.266±0.00 9.339±0.00 N/A 1.888±0.00 N/A N/A N/A N/A
ENST00000407236 1.117±0.00 N/A 1.773±0.00 0.676±0.30 0.918±0.00 N/A N/A N/A N/A 0.711±0.00 2.303±0.56 1.044±0.91 0.407±0.06 0.604±0.00
ENST00000415785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205643 ENST00000314567 N/A 2.554±0.00 N/A N/A N/A N/A 0.405±0.00 N/A 0.565±0.00 1.478±0.00 0.944±0.00 1.402±1.11 1.337±0.43 0.386±0.04
ENST00000381037 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.270±0.00 N/A N/A N/A
ENST00000404583 N/A 2.638±0.00 0.223±0.00 0.552±0.00 0.409±0.30 0.625±0.07 1.907±0.00 1.404±1.19 0.384±0.00 0.216±0.00 0.715±0.00 2.829±0.51 1.797±0.59 1.067±0.36
ENST00000404744 0.655±0.00 N/A N/A N/A N/A N/A N/A 0.652±0.00 0.269±0.00 N/A N/A N/A N/A 0.421±0.00
ENST00000474256 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A 0.816±0.00 N/A N/A
ENST00000475605 N/A N/A N/A 1.439±0.00 0.998±0.00 N/A N/A N/A N/A 0.190±0.00 0.993±0.00 1.327±0.81 N/A 0.617±0.00
ENSG00000280384 ENST00000624818 0.143±0.00 0.322±0.00 0.168±0.00 0.194±0.00 0.099±0.04 0.270±0.15 0.148±0.05 0.673±0.00 0.142±0.04 0.022±0.00 0.029±0.00 0.152±0.09 0.133±0.00 0.055±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022383 ENSMUST00000057979 N/A 1.161±0.36 N/A 0.266±0.00 N/A 0.741±0.00 N/A N/A 3.536±0.01 0.222±0.00 N/A 0.971±0.18 0.097±0.05 0.248±0.15
ENSMUST00000109422 N/A 1.657±0.64 N/A N/A 0.313±0.11 1.031±0.40 N/A N/A 6.830±0.28 0.291±0.06 0.320±0.00 0.840±0.34 0.079±0.02 0.185±0.11
ENSMUST00000109423 N/A 0.565±0.00 N/A N/A 0.454±0.00 0.894±0.25 N/A N/A N/A N/A N/A 0.640±0.00 0.062±0.02 0.395±0.06
ENSMUST00000134880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136453 N/A N/A N/A N/A N/A N/A N/A N/A 50.176±1.92 N/A N/A N/A N/A N/A
ENSMUST00000138813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.638±0.00 N/A N/A
ENSMUSG00000064284 ENSMUST00000071876 4.716±2.18 3.795±0.74 7.089±1.11 3.648±1.80 3.866±1.20 7.159±1.84 5.480±0.97 6.476±1.13 3.526±1.42 5.106±1.25 15.923±0.60 5.712±3.36 8.085±2.19 5.144±1.22
ENSMUST00000125947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144067 3.670±1.56 2.281±0.00 5.347±1.18 1.275±0.06 2.169±0.05 3.850±0.65 N/A 2.811±0.43 2.659±0.92 2.660±0.29 N/A 3.678±1.30 2.822±0.45 5.466±0.58
ENSMUST00000150995 6.215±1.91 14.508±1.66 N/A 5.288±4.49 5.998±1.31 11.620±1.02 5.648±0.48 10.057±1.80 4.692±1.27 7.304±1.29 N/A 7.087±3.75 10.338±5.77 4.722±0.00
ENSMUST00000154814 8.543±3.26 12.030±2.97 N/A N/A 6.478±1.48 10.372±1.24 7.571±1.48 9.554±1.90 5.837±3.80 8.978±1.38 N/A 9.414±3.04 8.047±0.51 N/A

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