C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007444-ENSDARG00000029439 CGP 7955 8:12159602-12262526
GeneTranscriptPositionBiotype
ENSDARG00000007444 (ift81)
intraflagellar transport 81 homolog 		ENSDART00000004288 (ift81-001) 12159602-12199091 protein_coding
ENSDART00000139745 (ift81-002) 12166193-12169909 retained_intron
ENSDARG00000029439 (atp2a2a)
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2a 		ENSDART00000042040 (atp2a2a-001) 12204786-12262526 protein_coding
ENSDART00000145436 (atp2a2a-002) 12204789-12232814 nonsense_mediated_decay
ENSDART00000146241 (atp2a2a-003) 12205118-12258010 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001QG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122970-ENSG00000174437 CGP 9606 12:110124335-110351093
GeneTranscriptPositionBiotype
ENSG00000122970 (IFT81)
intraflagellar transport 81 		ENST00000242591 (IFT81-003) 110124377-110218797 protein_coding
ENST00000361948 (IFT81-001) 110124335-110169182 protein_coding
ENST00000546374 (IFT81-004) 110124392-110163065 protein_coding
ENST00000549009 (IFT81-009) 110136807-110163040 processed_transcript
ENST00000550156 (IFT81-008) 110127473-110218786 nonsense_mediated_decay
ENST00000550748 (IFT81-007) 110203335-110218560 retained_intron
ENST00000551055 (IFT81-006) 110171895-110191061 processed_transcript
ENST00000551273 (IFT81-005) 110132593-110163065 nonsense_mediated_decay
ENST00000552912 (IFT81-002) 110124335-110218775 protein_coding
ENSG00000174437 (ATP2A2)
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 		ENST00000308664 (ATP2A2-001) 110281116-110351090 protein_coding
ENST00000313432 (ATP2A2-011) 110345437-110351093 retained_intron
ENST00000377685 (ATP2A2-002) 110281297-110351057 nonsense_mediated_decay
ENST00000539276 (ATP2A2-003) 110281681-110347326 protein_coding
ENST00000547050 (ATP2A2-008) 110325801-110332632 retained_intron
ENST00000547792 (ATP2A2-010) 110343256-110345247 retained_intron
ENST00000548169 (ATP2A2-006) 110292049-110346621 protein_coding
ENST00000549840 (ATP2A2-007) 110327687-110332143 processed_transcript
ENST00000550248 (ATP2A2-005) 110295991-110323072 processed_transcript
ENST00000550262 (ATP2A2-009) 110329399-110334291 retained_intron
ENST00000552636 (ATP2A2-004) 110280756-110296712 protein_coding
ENST00000553144 (ATP2A2-012) 110346201-110350373 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QG_0001ENSDARG00000007444ENSDART00000004288ENSDART00000139745ENSDARG00000029439ENSDART00000042040ENSDART00000145436ENSDART00000146241CIL_0001QG_0002ENSG00000122970ENST00000242591ENST00000361948ENST00000546374ENST00000549009ENST00000550156ENST00000550748ENST00000551055ENST00000551273ENST00000552912ENSG00000174437ENST00000308664ENST00000313432ENST00000377685ENST00000539276ENST00000547050ENST00000547792ENST00000548169ENST00000549840ENST00000550248ENST00000550262ENST00000552636ENST00000553144
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QG_0001ENSDARG00000007444ENSDART00000004288ENSDARG00000029439ENSDART00000042040ENSDART00000146241CIL_0001QG_0002ENSG00000122970ENST00000242591ENST00000361948ENST00000546374ENST00000550156ENST00000550748ENST00000551273ENST00000552912ENSG00000174437ENST00000308664ENST00000313432ENST00000377685ENST00000539276ENST00000548169
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007444 ENSDART00000004288 N/A N/A N/A 2.373±1.62 N/A N/A 2.582±1.51 3.468±0.91 0.068±0.00 N/A 0.614±0.00 N/A N/A N/A
ENSDART00000139745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029439 ENSDART00000042040 N/A N/A N/A 4.077±0.37 N/A N/A 612.759±455.54 6.986±0.42 1.709±0.00 N/A 89.157±0.00 N/A N/A N/A
ENSDART00000145436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146241 N/A N/A N/A 16.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122970 ENST00000242591 0.342±0.00 N/A N/A 0.601±0.09 0.396±0.00 1.209±0.83 0.274±0.10 0.577±0.00 0.775±0.00 0.781±0.00 N/A 1.072±0.50 0.234±0.13 3.073±0.00
ENST00000361948 0.211±0.00 N/A 0.629±0.00 N/A N/A 0.179±0.00 0.220±0.05 N/A 0.106±0.00 0.311±0.00 0.041±0.00 N/A 0.122±0.00 N/A
ENST00000546374 N/A N/A N/A 0.680±0.00 N/A 0.439±0.00 N/A 1.576±0.00 N/A N/A 0.419±0.00 N/A N/A N/A
ENST00000549009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550156 0.484±0.00 0.842±0.00 N/A N/A N/A N/A N/A 0.688±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550748 N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551273 N/A N/A N/A 1.481±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552912 N/A 0.956±0.00 1.380±0.00 1.511±0.63 1.100±0.00 0.306±0.00 0.561±0.00 0.343±0.00 0.763±0.64 0.670±0.35 0.778±0.00 2.914±0.78 0.722±0.39 19.600±11.47
ENSG00000174437 ENST00000308664 7.323±0.00 9.110±0.00 N/A N/A 29.299±0.00 11.597±0.00 322.690±281.03 N/A 4.920±0.00 8.610±0.00 300.412±84.85 15.407±0.00 N/A 15.925±0.00
ENST00000313432 N/A 4.979±0.00 N/A N/A N/A N/A N/A N/A 8.927±0.00 12.840±0.00 N/A 10.131±1.70 N/A 16.055±0.00
ENST00000377685 N/A N/A 1.304±0.00 N/A 3.331±0.00 N/A N/A 2.873±0.00 N/A N/A N/A 3.235±0.00 N/A N/A
ENST00000539276 10.335±0.00 7.371±0.00 4.249±0.00 15.890±0.00 10.932±0.00 8.766±3.25 N/A 11.531±3.19 17.647±2.49 15.001±3.01 N/A 18.499±10.88 19.061±0.83 38.839±10.71
ENST00000547050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548169 N/A 7.930±0.00 N/A N/A 5.474±0.00 5.719±0.00 N/A N/A N/A 17.711±0.00 N/A 27.350±0.00 12.708±0.00 42.060±0.00
ENST00000549840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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