C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068910-ENSDARG00000094526 CGP 7955 5:13188827-13501138
GeneTranscriptPositionBiotype
ENSDARG00000068910 (nos1)
nitric oxide synthase 1 (neuronal) 		ENSDART00000099810 (nos1-201) 13193814-13313998 protein_coding
ENSDART00000099822 (nos1-001) 13188827-13313998 protein_coding
ENSDARG00000093726 (si:ch211-240j18.2)
si:ch211-240j18.2 		ENSDART00000143646 (si:ch211-240j18.2-001) 13366392-13374071 processed_transcript
ENSDARG00000094526 (ksr2)
kinase suppressor of ras 2 		ENSDART00000125291 (ksr2-001) 13379670-13501138 protein_coding
ENSDART00000147300 (ksr2-002) 13447665-13466841 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0001QM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089250-ENSG00000171435 CGP 9606 12:117208142-117968983
GeneTranscriptPositionBiotype
ENSG00000089250 (NOS1)
nitric oxide synthase 1 (neuronal) 		ENST00000317775 (NOS1-001) 117208142-117361777 protein_coding
ENST00000338101 (NOS1-002) 117215259-117331074 protein_coding
ENST00000344089 (NOS1-201) 117215281-117331079 protein_coding
ENST00000477584 (NOS1-003) 117348035-117361629 processed_transcript
ENST00000549189 (NOS1-005) 117331433-117452170 processed_transcript
ENST00000618760 (NOS1-202) 117208144-117361802 protein_coding
ENSG00000171435 (KSR2)
kinase suppressor of ras 2 		ENST00000339824 (KSR2-001) 117453054-117968983 protein_coding
ENST00000425217 (KSR2-201) 117453012-117968223 protein_coding
ENST00000543793 (KSR2-003) 117539472-117555229 retained_intron
ENST00000545002 (KSR2-002) 117517706-117677251 processed_transcript
ENSG00000255686 (RP11-227B21.2)
 ENST00000540161 (RP11-227B21.2-001) 117453012-117456986 lincRNA
ENSG00000256071 (RP11-465L8.1)
 ENST00000544667 (RP11-465L8.1-001) 117889454-117891008 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QM_0001ENSDARG00000068910ENSDART00000099810ENSDART00000099822ENSDARG00000093726ENSDART00000143646ENSDARG00000094526ENSDART00000125291ENSDART00000147300CIL_0001QM_0002ENSG00000089250ENST00000317775ENST00000338101ENST00000344089ENST00000477584ENST00000549189ENST00000618760ENSG00000171435ENST00000339824ENST00000425217ENST00000543793ENST00000545002ENSG00000255686ENST00000540161ENSG00000256071ENST00000544667
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QM_0001ENSDARG00000068910ENSDART00000099810ENSDART00000099822ENSDARG00000093726ENSDART00000143646ENSDARG00000094526ENSDART00000125291ENSDART00000147300CIL_0001QM_0002ENSG00000089250ENST00000317775ENST00000338101ENST00000344089ENST00000618760ENSG00000171435ENST00000339824ENST00000425217ENSG00000255686ENST00000540161ENSG00000256071ENST00000544667
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068910 ENSDART00000099810 N/A N/A N/A N/A N/A N/A 0.021±0.00 0.106±0.00 0.052±0.00 N/A N/A N/A N/A N/A
ENSDART00000099822 N/A N/A N/A 3.560±3.34 N/A N/A 0.982±0.38 0.433±0.00 N/A N/A 0.228±0.00 N/A N/A N/A
ENSDARG00000093726 ENSDART00000143646 N/A N/A N/A 0.402±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094526 ENSDART00000125291 N/A N/A N/A N/A N/A N/A 0.024±0.00 0.170±0.00 0.038±0.00 N/A 0.663±0.00 N/A N/A N/A
ENSDART00000147300 N/A N/A N/A N/A N/A N/A 0.815±0.00 N/A 0.098±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089250 ENST00000317775 0.063±0.00 0.138±0.00 0.070±0.00 0.702±0.39 0.165±0.00 1.657±0.00 0.024±0.02 0.483±0.46 0.063±0.03 0.618±0.00 N/A 0.034±0.03 0.003±0.00 0.481±0.14
ENST00000338101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.013±0.00 N/A N/A N/A
ENST00000344089 N/A N/A 0.424±0.00 0.928±0.00 0.103±0.00 N/A 0.027±0.00 N/A 0.055±0.00 0.291±0.00 3.105±0.00 N/A N/A N/A
ENST00000477584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618760 N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A 1.623±0.00 0.003±0.00 0.001±0.00 N/A
ENSG00000171435 ENST00000339824 N/A N/A 0.247±0.00 1.204±0.54 0.029±0.01 0.094±0.00 N/A 0.105±0.00 N/A N/A N/A 0.028±0.01 0.023±0.00 0.229±0.09
ENST00000425217 0.003±0.00 N/A N/A 0.313±0.00 N/A N/A 0.005±0.00 0.003±0.00 N/A 0.015±0.00 0.002±0.00 0.006±0.00 0.005±0.00 0.130±0.07
ENST00000543793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255686 ENST00000540161 N/A 0.132±0.00 N/A 8.758±0.00 N/A 0.484±0.00 N/A N/A N/A 0.191±0.00 N/A N/A N/A 1.413±0.00
ENSG00000256071 ENST00000544667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00

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