C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161920-ENSG00000161921 CGP 9606 17:4731428-4739922
GeneTranscriptPositionBiotype
ENSG00000161920 (MED11)
mediator complex subunit 11 		ENST00000293777 (MED11-001) 4731434-4733610 protein_coding
ENST00000573708 (MED11-002) 4731431-4732433 protein_coding
ENST00000575284 (MED11-003) 4731428-4733312 protein_coding
ENSG00000161921 (CXCL16)
chemokine (C-X-C motif) ligand 16 		ENST00000293778 (CXCL16-001) 4733526-4739819 protein_coding
ENST00000573123 (CXCL16-004) 4735367-4739145 protein_coding
ENST00000574412 (CXCL16-002) 4734286-4739922 protein_coding
ENST00000575168 (CXCL16-005) 4734583-4738539 retained_intron
ENST00000576153 (CXCL16-003) 4733575-4736380 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0001RD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018923-ENSMUSG00000018920 CGP 10090 11:70451919-70459984
GeneTranscriptPositionBiotype
ENSMUSG00000018920 (Cxcl16)
chemokine (C-X-C motif) ligand 16 		ENSMUST00000019064 (Cxcl16-001) 70453983-70459984 protein_coding
ENSMUST00000126391 (Cxcl16-002) 70454238-70459408 nonsense_mediated_decay
ENSMUST00000154475 (Cxcl16-004) 70455190-70459832 retained_intron
ENSMUSG00000018923 (Med11)
mediator complex subunit 11 		ENSMUST00000019067 (Med11-001) 70451919-70453727 protein_coding
ENSMUST00000151013 (Med11-002) 70451919-70453240 protein_coding
ENSMUST00000152348 (Med11-003) 70451932-70453564 retained_intron
ENSMUSG00000040829 (Zmynd15)
zinc finger, MYND-type containing 15 		ENSMUST00000039093 (Zmynd15-001) 70459622-70466202 protein_coding
ENSMUST00000092958 (Zmynd15-002) 70460565-70466090 protein_coding
ENSMUST00000108563 (Zmynd15-005) 70459433-70466202 protein_coding
ENSMUST00000126105 (Zmynd15-004) 70460137-70460896 protein_coding
ENSMUST00000136029 (Zmynd15-006) 70460196-70466199 retained_intron
ENSMUST00000147289 (Zmynd15-003) 70459940-70460862 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RD_0001ENSG00000161920ENST00000293777ENST00000573708ENST00000575284ENSG00000161921ENST00000293778ENST00000573123ENST00000574412ENST00000575168ENST00000576153CIL_0001RD_0002ENSMUSG00000018920ENSMUST00000019064ENSMUST00000126391ENSMUST00000154475ENSMUSG00000018923ENSMUST00000019067ENSMUST00000151013ENSMUST00000152348ENSMUSG00000040829ENSMUST00000039093ENSMUST00000092958ENSMUST00000108563ENSMUST00000126105ENSMUST00000136029ENSMUST00000147289
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RD_0001ENSG00000161920ENST00000293777ENST00000575284ENSG00000161921ENST00000293778ENST00000573123ENST00000574412ENST00000575168ENST00000576153CIL_0001RD_0002ENSMUSG00000018920ENSMUST00000019064ENSMUST00000126391ENSMUSG00000018923ENSMUST00000019067ENSMUST00000152348ENSMUSG00000040829ENSMUST00000039093ENSMUST00000108563ENSMUST00000136029
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161920 ENST00000293777 N/A 14.315±0.00 0.583±0.00 6.352±0.00 8.388±7.50 4.236±3.49 3.220±2.88 11.958±9.13 7.968±6.78 1.805±0.00 5.053±2.23 8.622±4.22 15.356±1.49 8.307±0.00
ENST00000573708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575284 N/A N/A 1.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161921 ENST00000293778 30.555±0.00 14.866±0.00 1.497±0.00 4.622±3.87 19.492±0.00 6.146±0.00 1.414±1.27 8.078±5.10 8.486±7.15 35.078±33.45 1.293±0.00 10.482±4.23 13.224±2.66 17.130±0.16
ENST00000573123 N/A N/A N/A N/A N/A 1.389±0.00 N/A N/A 1.403±0.00 N/A N/A N/A N/A N/A
ENST00000574412 N/A N/A N/A N/A 1.552±0.00 N/A N/A 1.250±0.00 N/A 1.166±0.00 N/A 2.855±2.05 N/A 21.886±1.94
ENST00000575168 N/A N/A N/A N/A 1.950±0.00 1.010±0.00 0.268±0.00 3.552±0.00 N/A 7.056±0.00 N/A N/A N/A 38.340±8.24
ENST00000576153 N/A N/A N/A 3.736±0.00 N/A 1.912±0.00 N/A N/A N/A N/A N/A 7.876±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018920 ENSMUST00000019064 14.157±6.33 12.095±1.28 4.977±0.62 0.670±0.24 28.517±7.90 12.500±2.56 6.092±0.63 30.051±1.69 2.839±2.17 35.734±2.67 0.324±0.27 21.376±8.74 0.778±0.65 N/A
ENSMUST00000126391 11.596±0.00 N/A 9.369±0.02 0.525±0.30 N/A 7.446±0.04 N/A 23.843±2.11 1.633±1.33 N/A 0.508±0.34 8.024±0.60 1.891±1.23 N/A
ENSMUST00000154475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018923 ENSMUST00000019067 10.216±0.88 5.699±0.52 8.614±0.33 10.328±1.07 8.599±1.13 9.312±0.91 3.172±1.23 12.016±0.45 8.811±4.43 11.171±0.84 2.603±0.93 11.306±4.40 20.961±5.76 4.074±0.65
ENSMUST00000151013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152348 1.589±0.41 N/A 1.102±0.00 4.208±0.75 1.538±0.43 1.220±0.00 0.663±0.26 N/A N/A 1.840±0.00 0.709±0.26 1.644±0.38 N/A 0.664±0.00
ENSMUSG00000040829 ENSMUST00000039093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A 70.618±28.76
ENSMUST00000092958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108563 4.027±1.80 2.970±0.56 1.651±0.00 0.213±0.08 7.815±2.31 3.760±0.08 N/A 6.552±0.66 1.019±0.46 9.045±1.92 0.238±0.20 4.455±1.20 0.533±0.37 N/A
ENSMUST00000126105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136029 2.031±0.73 1.024±0.00 1.095±0.00 0.729±0.12 4.322±0.37 N/A 0.948±0.02 N/A 0.305±0.22 N/A 0.076±0.03 1.740±0.43 N/A N/A
ENSMUST00000147289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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