C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152766-ENSG00000138134 CGP 9606 10:88822132-88975153
GeneTranscriptPositionBiotype
ENSG00000107796 (ACTA2)
actin, alpha 2, smooth muscle, aorta 		ENST00000224784 (ACTA2-001) 88935074-88952773 protein_coding
ENST00000415557 (ACTA2-002) 88941785-88991339 protein_coding
ENST00000458159 (ACTA2-003) 88941785-88991288 protein_coding
ENST00000458208 (ACTA2-201) 88935076-88991390 protein_coding
ENST00000480297 (ACTA2-006) 88941001-88952747 processed_transcript
ENST00000482085 (ACTA2-004) 88948242-88952773 processed_transcript
ENST00000488967 (ACTA2-005) 88946820-88952773 processed_transcript
ENSG00000138134 (STAMBPL1)
STAM binding protein-like 1 		ENST00000371922 (STAMBPL1-004) 88912356-88923487 protein_coding
ENST00000371924 (STAMBPL1-003) 88901075-88923487 protein_coding
ENST00000371926 (STAMBPL1-001) 88879734-88923487 protein_coding
ENST00000371927 (STAMBPL1-002) 88879734-88975153 protein_coding
ENST00000461650 (STAMBPL1-005) 88880224-88893913 processed_transcript
ENST00000468698 (STAMBPL1-006) 88882083-88882857 processed_transcript
ENSG00000152766 (ANKRD22)
ankyrin repeat domain 22 		ENST00000371930 (ANKRD22-001) 88822132-88851818 protein_coding
ENST00000476963 (ANKRD22-002) 88822801-88823515 processed_transcript
ENSG00000180139 (ACTA2-AS1)
ACTA2 antisense RNA 1 		ENST00000437930 (ACTA2-AS1-001) 88932643-88940340 antisense
ENST00000596007 (ACTA2-AS1-003) 88939475-88940611 antisense
ENSG00000234256 (PTCD2P2)
pentatricopeptide repeat domain 2 pseudogene 2 		ENST00000415579 (PTCD2P2-001) 88876450-88877544 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001RY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024774-ENSMUSG00000024776 CGP 10090 19:34122549-34240333
GeneTranscriptPositionBiotype
ENSMUSG00000024774 (Ankrd22)
ankyrin repeat domain 22 		ENSMUST00000025686 (Ankrd22-001) 34122549-34166053 protein_coding
ENSMUST00000159887 (Ankrd22-003) 34122925-34160860 processed_transcript
ENSMUST00000160474 (Ankrd22-002) 34122925-34154917 processed_transcript
ENSMUSG00000024776 (Stambpl1)
STAM binding protein like 1 		ENSMUST00000054956 (Stambpl1-001) 34192229-34240333 protein_coding
ENSMUST00000119603 (Stambpl1-003) 34217624-34240331 protein_coding
ENSMUST00000125232 (Stambpl1-002) 34217434-34235862 retained_intron
ENSMUST00000129535 (Stambpl1-004) 34192822-34231442 protein_coding
ENSMUST00000130756 (Stambpl1-005) 34232706-34234299 processed_transcript
ENSMUSG00000056078 (Lipm)
lipase, family member M 		ENSMUST00000025685 (Lipm-201) 34100943-34122687 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RY_0001ENSG00000107796ENST00000224784ENST00000415557ENST00000458159ENST00000458208ENST00000480297ENST00000482085ENST00000488967ENSG00000138134ENST00000371922ENST00000371924ENST00000371926ENST00000371927ENST00000461650ENST00000468698ENSG00000152766ENST00000371930ENST00000476963ENSG00000180139ENST00000437930ENST00000596007ENSG00000234256ENST00000415579CIL_0001RY_0002ENSMUSG00000024774ENSMUST00000025686ENSMUST00000159887ENSMUST00000160474ENSMUSG00000024776ENSMUST00000054956ENSMUST00000119603ENSMUST00000125232ENSMUST00000129535ENSMUST00000130756ENSMUSG00000056078ENSMUST00000025685
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RY_0001ENSG00000107796ENST00000224784ENST00000480297ENSG00000138134ENST00000371922ENST00000371924ENST00000371926ENST00000371927ENSG00000152766ENST00000371930ENST00000476963ENSG00000180139ENST00000437930ENSG00000234256ENST00000415579CIL_0001RY_0002ENSMUSG00000024774ENSMUST00000025686ENSMUST00000159887ENSMUST00000160474ENSMUSG00000024776ENSMUST00000054956ENSMUST00000119603ENSMUST00000125232ENSMUST00000130756ENSMUSG00000056078ENSMUST00000025685
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107796 ENST00000224784 247.266±0.00 1046.020±0.00 14.679±0.00 21.065±13.70 256.316±74.65 443.515±313.59 48.897±26.26 132.740±125.46 306.229±258.71 392.149±335.37 102.044±65.32 502.267±427.23 766.020±366.91 547.593±435.83
ENST00000415557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480297 N/A N/A 12.879±0.00 2.085±0.00 N/A N/A N/A N/A N/A N/A 18.514±0.00 25.434±0.00 N/A N/A
ENST00000482085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138134 ENST00000371922 0.080±0.00 1.267±0.00 N/A 0.716±0.00 1.888±0.00 0.298±0.00 0.172±0.00 0.194±0.02 N/A 0.845±0.00 0.118±0.04 1.506±0.25 0.220±0.00 N/A
ENST00000371924 N/A N/A N/A N/A 0.203±0.00 0.986±0.00 N/A N/A 0.399±0.00 1.228±0.00 N/A 1.483±0.00 N/A N/A
ENST00000371926 0.389±0.00 2.484±0.00 0.157±0.00 3.085±0.33 0.893±0.00 1.448±0.00 0.358±0.00 0.366±0.00 0.404±0.00 2.130±0.00 N/A 9.753±6.92 1.230±0.68 17.672±10.47
ENST00000371927 0.050±0.00 N/A 0.069±0.00 N/A 0.121±0.00 N/A 0.073±0.01 0.048±0.00 0.239±0.00 N/A 0.016±0.00 N/A N/A N/A
ENST00000461650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152766 ENST00000371930 0.319±0.00 0.221±0.00 N/A 0.182±0.00 0.220±0.19 0.834±0.43 0.150±0.00 0.852±0.58 0.119±0.07 0.510±0.25 N/A 3.330±3.06 0.269±0.07 0.036±0.00
ENST00000476963 N/A N/A N/A N/A 0.062±0.00 N/A 0.149±0.00 N/A 0.215±0.00 N/A N/A 0.260±0.00 N/A N/A
ENSG00000180139 ENST00000437930 N/A N/A N/A 0.742±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234256 ENST00000415579 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.244±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024774 ENSMUST00000025686 N/A N/A 5.539±1.05 0.036±0.02 0.094±0.02 0.583±0.38 N/A N/A 0.416±0.61 0.447±0.28 0.026±0.00 0.012±0.00 0.245±0.17 0.400±0.18
ENSMUST00000159887 0.024±0.00 N/A 2.818±0.50 0.022±0.00 0.117±0.08 0.502±0.13 0.026±0.01 0.049±0.04 0.168±0.24 0.035±0.00 N/A 0.074±0.04 0.025±0.00 0.347±0.21
ENSMUST00000160474 0.024±0.00 N/A 2.818±0.50 0.022±0.00 0.117±0.08 0.502±0.13 0.026±0.01 0.049±0.04 0.168±0.24 0.035±0.00 N/A 0.074±0.04 0.025±0.00 0.347±0.21
ENSMUSG00000024776 ENSMUST00000054956 3.408±0.58 1.941±0.63 N/A 1.619±0.11 4.403±2.01 2.970±0.71 0.801±0.31 0.595±0.04 0.821±0.52 2.477±0.51 0.174±0.04 2.102±0.98 1.968±0.42 N/A
ENSMUST00000119603 N/A N/A N/A 3.147±0.00 4.658±0.00 N/A 0.853±0.00 0.379±0.00 0.292±0.21 N/A 0.233±0.11 1.920±0.84 2.267±0.94 7.926±3.68
ENSMUST00000125232 N/A N/A N/A N/A 0.653±0.00 N/A N/A 0.083±0.01 0.087±0.03 N/A 0.019±0.01 0.209±0.05 N/A N/A
ENSMUST00000129535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A
ENSMUSG00000056078 ENSMUST00000025685 N/A N/A N/A 0.056±0.04 0.181±0.04 N/A N/A N/A 0.013±0.01 1.341±0.08 0.065±0.02 0.008±0.00 0.023±0.00 N/A

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