C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001T9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053459-ENSDARG00000058522 CGP 7955 6:43938009-44092562
GeneTranscriptPositionBiotype
ENSDARG00000053459 (rybpb)
RING1 and YY1 binding protein b
ENSDART00000075497 (rybpb-001) 43938009-43975685 protein_coding
ENSDARG00000058522 (shq1)
SHQ1 homolog (S. cerevisiae)
ENSDART00000035513 (shq1-001) 44020489-44092562 protein_coding
CIL_0001T9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163602-ENSG00000144736 CGP 9606 3:72371825-72861914
GeneTranscriptPositionBiotype
ENSG00000144736 (SHQ1)
SHQ1, H/ACA ribonucleoprotein assembly factor
ENST00000325599 (SHQ1-001) 72749279-72848480 protein_coding
ENST00000444040 (SHQ1-003) 72749279-72848415 nonsense_mediated_decay
ENST00000463369 (SHQ1-004) 72749959-72846363 protein_coding
ENST00000468347 (SHQ1-007) 72814497-72817250 processed_transcript
ENST00000468371 (SHQ1-002) 72749277-72795590 processed_transcript
ENST00000471526 (SHQ1-006) 72841045-72848472 nonsense_mediated_decay
ENST00000475558 (SHQ1-008) 72809620-72817384 processed_transcript
ENST00000482785 (SHQ1-005) 72832369-72861914 protein_coding
ENSG00000163602 (RYBP)
RING1 and YY1 binding protein
ENST00000477973 (RYBP-001) 72371825-72446918 protein_coding
ENSG00000241537 (RP11-624D20.1)
ENST00000495088 (RP11-624D20.1-001) 72772539-72773471 processed_pseudogene
ENSG00000244345 (RP11-654C22.2)
ENST00000478745 (RP11-654C22.2-001) 72504806-72550552 lincRNA
CIL_0001T9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000072872-ENSMUSG00000035378 CGP 10090 6:100228566-100671157
GeneTranscriptPositionBiotype
ENSMUSG00000035378 (Shq1)
SHQ1 homolog (S. cerevisiae)
ENSMUST00000089245 (Shq1-002) 100573083-100671139 protein_coding
ENSMUST00000113312 (Shq1-001) 100573081-100671157 protein_coding
ENSMUST00000162776 (Shq1-003) 100662839-100671133 processed_transcript
ENSMUST00000170667 (Shq1-201) 100573082-100671157 protein_coding
ENSMUSG00000072872 (Rybp)
RING1 and YY1 binding protein
ENSMUST00000101118 (Rybp-201) 100228566-100287441 protein_coding
ENSMUSG00000079224 (Gm6565)
predicted gene 6565
ENSMUST00000121217 (Gm6565-001) 100604683-100605120 processed_pseudogene
ENSMUSG00000087929 (Gm23234)
predicted gene, 23234
ENSMUST00000157304 (Gm23234-201) 100494681-100494814 snoRNA
ENSMUSG00000101553 (RP24-114M8.3)
RIKEN cDNA 1700049E22 gene
ENSMUST00000187986 (RP24-114M8.3-001) 100527400-100533426 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001T9_0001ENSDARG00000053459ENSDART00000075497ENSDARG00000058522ENSDART00000035513CIL_0001T9_0002ENSG00000144736ENST00000325599ENST00000444040ENST00000463369ENST00000468347ENST00000468371ENST00000471526ENST00000475558ENST00000482785ENSG00000163602ENST00000477973ENSG00000241537ENST00000495088ENSG00000244345ENST00000478745CIL_0001T9_0003ENSMUSG00000035378ENSMUST00000089245ENSMUST00000113312ENSMUST00000162776ENSMUST00000170667ENSMUSG00000072872ENSMUST00000101118ENSMUSG00000079224ENSMUST00000121217ENSMUSG00000087929ENSMUST00000157304ENSMUSG00000101553ENSMUST00000187986
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001T9_0001ENSDARG00000053459ENSDART00000075497ENSDARG00000058522ENSDART00000035513CIL_0001T9_0002ENSG00000144736ENST00000325599ENST00000463369ENST00000468371ENST00000471526ENST00000482785ENSG00000163602ENST00000477973ENSG00000241537ENST00000495088ENSG00000244345ENST00000478745CIL_0001T9_0003ENSMUSG00000035378ENSMUST00000089245ENSMUST00000113312ENSMUST00000162776ENSMUST00000170667ENSMUSG00000072872ENSMUST00000101118ENSMUSG00000079224ENSMUST00000121217ENSMUSG00000087929ENSMUST00000157304ENSMUSG00000101553ENSMUST00000187986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053459 ENSDART00000075497 N/A N/A N/A 11.270±2.84 N/A N/A 2.624±0.88 3.191±1.11 0.337±0.00 N/A 1.059±0.00 N/A N/A N/A
ENSDARG00000058522 ENSDART00000035513 N/A N/A N/A 0.773±0.48 N/A N/A 0.912±0.85 1.158±1.14 0.718±0.00 N/A 0.686±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144736 ENST00000325599 2.562±0.00 4.293±0.00 0.180±0.00 0.800±0.11 2.406±0.96 1.955±0.66 2.215±1.03 1.250±0.16 1.598±0.32 1.235±0.27 2.963±0.00 3.667±2.17 2.892±1.04 5.071±2.71
ENST00000444040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463369 N/A N/A 0.231±0.00 N/A N/A N/A 0.468±0.00 N/A N/A N/A N/A 0.384±0.00 N/A N/A
ENST00000468347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468371 N/A N/A N/A N/A 0.778±0.00 0.666±0.00 N/A 0.264±0.00 0.257±0.00 0.625±0.00 N/A N/A N/A N/A
ENST00000471526 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 1.509±0.00 N/A N/A 10.604±0.00
ENST00000475558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482785 N/A N/A N/A 2.737±0.00 N/A N/A N/A N/A N/A N/A 1.578±0.00 N/A N/A N/A
ENSG00000163602 ENST00000477973 4.892±0.00 3.864±0.00 1.098±0.00 3.299±2.51 3.572±0.00 4.114±3.29 1.619±1.19 2.946±1.96 2.441±0.57 7.097±4.20 0.941±0.73 4.588±3.15 6.781±1.79 7.603±1.37
ENSG00000241537 ENST00000495088 N/A 0.045±0.00 N/A N/A 0.174±0.00 N/A 0.020±0.00 N/A 0.027±0.00 0.104±0.00 N/A 0.088±0.11 N/A N/A
ENSG00000244345 ENST00000478745 N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.139±0.00 0.039±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035378 ENSMUST00000089245 0.439±0.14 2.586±1.33 N/A 3.256±0.00 0.397±0.00 1.411±0.93 N/A 0.902±0.04 1.175±0.43 0.858±0.00 0.346±0.29 1.630±1.36 5.217±4.39 4.347±0.00
ENSMUST00000113312 2.017±1.23 2.005±1.34 3.091±0.64 2.949±0.42 1.594±0.61 1.732±1.00 0.984±0.16 1.950±0.56 3.571±2.68 1.682±0.76 0.460±0.19 3.559±1.01 4.576±0.68 3.240±0.76
ENSMUST00000162776 N/A 2.173±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.404±0.00 N/A N/A
ENSMUST00000170667 N/A 0.515±0.09 N/A N/A 0.797±0.48 1.553±0.51 0.397±0.00 1.175±0.00 0.450±0.00 0.442±0.14 0.102±0.00 2.685±0.62 2.182±1.20 0.601±0.00
ENSMUSG00000072872 ENSMUST00000101118 7.471±4.65 1.632±0.72 13.886±0.83 10.487±6.14 3.272±1.70 5.672±0.51 2.356±0.17 4.878±0.87 4.288±2.28 9.740±2.08 1.094±0.20 9.370±1.79 19.984±9.65 6.118±2.55
ENSMUSG00000079224 ENSMUST00000121217 0.202±0.05 N/A 0.130±0.11 0.471±0.45 N/A N/A 0.206±0.06 0.214±0.08 0.620±0.43 0.180±0.00 0.313±0.10 0.565±0.00 0.052±0.00 0.472±0.15
ENSMUSG00000087929 ENSMUST00000157304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.953±0.00 N/A
ENSMUSG00000101553 ENSMUST00000187986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.991±0.87

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