C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136381-ENSG00000188266 CGP 9606 15:78437431-78537372
GeneTranscriptPositionBiotype
ENSG00000136381 (IREB2)
iron-responsive element binding protein 2 		ENST00000258886 (IREB2-001) 78438189-78501456 protein_coding
ENST00000558525 (IREB2-008) 78438228-78471801 nonsense_mediated_decay
ENST00000558570 (IREB2-003) 78438309-78498209 nonsense_mediated_decay
ENST00000559091 (IREB2-009) 78494210-78497338 protein_coding
ENST00000559215 (IREB2-006) 78438176-78466436 nonsense_mediated_decay
ENST00000559427 (IREB2-007) 78465299-78470948 processed_transcript
ENST00000559676 (IREB2-010) 78483420-78488756 retained_intron
ENST00000560440 (IREB2-002) 78438284-78476700 protein_coding
ENST00000560454 (IREB2-005) 78438422-78462944 processed_transcript
ENST00000560840 (IREB2-004) 78437431-78465264 protein_coding
ENSG00000188266 (HYKK)
hydroxylysine kinase 		ENST00000388988 (HYKK-201) 78507564-78533670 protein_coding
ENST00000408962 (HYKK-202) 78507564-78537372 protein_coding
ENST00000563233 (HYKK-002) 78513089-78537372 protein_coding
ENST00000566289 (HYKK-003) 78507582-78528801 nonsense_mediated_decay
ENST00000566332 (HYKK-004) 78507617-78528264 protein_coding
ENST00000569878 (HYKK-001) 78513089-78536645 protein_coding
ENSG00000259474 (RP11-650L12.1)
 ENST00000560094 (RP11-650L12.1-001) 78480057-78481820 antisense
CIL_0001UQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032293-ENSMUSG00000035878 CGP 10090 9:54863755-54949924
GeneTranscriptPositionBiotype
ENSMUSG00000032293 (Ireb2)
iron responsive element binding protein 2 		ENSMUST00000034843 (Ireb2-201) 54863755-54912534 protein_coding
ENSMUSG00000035878 (Hykk)
hydroxylysine kinase 1 		ENSMUST00000039742 (Hykk-001) 54917283-54949924 protein_coding
ENSMUST00000124295 (Hykk-003) 54917312-54938164 retained_intron
ENSMUST00000125983 (Hykk-004) 54917311-54931063 retained_intron
ENSMUST00000135648 (Hykk-002) 54917347-54919240 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UQ_0001ENSG00000136381ENST00000258886ENST00000558525ENST00000558570ENST00000559091ENST00000559215ENST00000559427ENST00000559676ENST00000560440ENST00000560454ENST00000560840ENSG00000188266ENST00000388988ENST00000408962ENST00000563233ENST00000566289ENST00000566332ENST00000569878ENSG00000259474ENST00000560094CIL_0001UQ_0002ENSMUSG00000032293ENSMUST00000034843ENSMUSG00000035878ENSMUST00000039742ENSMUST00000124295ENSMUST00000125983ENSMUST00000135648
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UQ_0001ENSG00000136381ENST00000258886ENST00000558570ENSG00000188266ENST00000388988ENST00000408962ENST00000563233ENST00000566289ENST00000566332ENST00000569878ENSG00000259474ENST00000560094CIL_0001UQ_0002ENSMUSG00000032293ENSMUST00000034843ENSMUSG00000035878ENSMUST00000039742ENSMUST00000124295ENSMUST00000125983ENSMUST00000135648
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136381 ENST00000258886 3.876±0.00 3.490±0.00 2.398±0.00 4.671±0.96 5.699±0.00 4.621±1.81 3.089±1.03 4.557±0.80 3.362±1.45 4.522±1.54 3.285±0.00 4.065±1.22 4.514±1.11 7.457±0.14
ENST00000558525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.510±0.00 N/A N/A
ENST00000559091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188266 ENST00000388988 N/A N/A N/A 0.666±0.00 0.627±0.00 N/A N/A 0.301±0.00 N/A 0.148±0.00 1.196±0.00 0.672±0.01 N/A N/A
ENST00000408962 0.769±0.00 0.829±0.00 N/A N/A N/A 1.783±0.00 0.744±0.00 N/A N/A 0.813±0.00 1.145±0.73 1.568±0.49 N/A N/A
ENST00000563233 N/A N/A 2.331±0.00 N/A 1.098±0.26 0.753±0.00 0.393±0.00 1.931±0.00 0.967±0.00 N/A N/A 1.720±0.23 0.471±0.12 3.785±1.39
ENST00000566289 0.183±0.00 0.427±0.00 N/A 0.270±0.00 0.253±0.03 N/A 0.166±0.00 0.289±0.03 0.452±0.00 0.139±0.00 N/A N/A 0.059±0.00 N/A
ENST00000566332 N/A N/A 0.815±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENST00000569878 N/A 0.308±0.00 0.606±0.00 0.168±0.00 0.225±0.08 0.453±0.00 0.165±0.00 0.530±0.00 0.382±0.08 0.112±0.04 0.109±0.03 0.502±0.07 0.042±0.02 0.424±0.00
ENSG00000259474 ENST00000560094 0.041±0.00 0.538±0.00 N/A 0.084±0.00 0.282±0.00 0.113±0.00 0.074±0.00 N/A 0.208±0.00 N/A N/A 0.204±0.00 N/A 0.102±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032293 ENSMUST00000034843 5.507±2.82 2.709±0.68 6.224±0.88 16.052±8.08 4.162±1.37 2.987±1.13 3.347±0.24 6.796±1.01 8.153±1.49 6.079±0.69 4.287±0.51 6.450±3.73 14.841±2.47 10.972±3.35
ENSMUSG00000035878 ENSMUST00000039742 1.404±0.13 0.602±0.16 0.667±0.04 0.378±0.11 0.822±0.14 1.118±0.29 0.337±0.06 22.986±1.27 5.352±3.90 1.664±0.10 0.168±0.05 0.852±0.33 0.706±0.35 0.094±0.06
ENSMUST00000124295 N/A 0.106±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.103±0.01 N/A 0.039±0.02
ENSMUST00000125983 N/A N/A N/A 0.080±0.00 N/A N/A 0.044±0.00 N/A N/A N/A 0.047±0.00 N/A N/A 0.048±0.02
ENSMUST00000135648 N/A 0.537±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.335±0.00 N/A N/A

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