C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001VP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084112-ENSG00000110887 CGP 9606 12:108778192-108901043
GeneTranscriptPositionBiotype
ENSG00000110887 (DAO)
D-amino-acid oxidase 		ENST00000228476 (DAO-001) 108880030-108901043 protein_coding
ENST00000546552 (DAO-010) 108898472-108900493 retained_intron
ENST00000547122 (DAO-003) 108880091-108901039 nonsense_mediated_decay
ENST00000547166 (DAO-009) 108880351-108894345 protein_coding
ENST00000547768 (DAO-008) 108880109-108899432 protein_coding
ENST00000548052 (DAO-007) 108858932-108883771 processed_transcript
ENST00000549215 (DAO-005) 108880140-108900931 nonsense_mediated_decay
ENST00000551281 (DAO-006) 108858932-108900921 protein_coding
ENSG00000207622 (MIR619)
microRNA 619 		ENST00000384890 (MIR619-201) 108836908-108837006 miRNA
ENSG00000274598 (RP11-423G4.10)
 ENST00000612818 (RP11-423G4.10-001) 108833721-108834384 sense_intronic
CIL_0001VP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042121-ENSMUSG00000042096 CGP 10090 5:113937094-114025449
GeneTranscriptPositionBiotype
ENSMUSG00000042096 (Dao)
D-amino acid oxidase 		ENSMUST00000086599 (Dao-002) 114003884-114025449 protein_coding
ENSMUST00000112292 (Dao-001) 114003703-114025449 protein_coding
ENSMUST00000161610 (Dao-003) 114004808-114025449 protein_coding
ENSMUST00000162214 (Dao-004) 114017092-114020004 retained_intron
ENSMUSG00000042121 (Ssh1)
slingshot homolog 1 (Drosophila) 		ENSMUST00000077689 (Ssh1-003) 113942192-113989743 protein_coding
ENSMUST00000112298 (Ssh1-002) 113939765-113993779 protein_coding
ENSMUST00000159510 (Ssh1-004) 113961393-113993827 nonsense_mediated_decay
ENSMUST00000159592 (Ssh1-001) 113937094-113993894 protein_coding
ENSMUST00000162322 (Ssh1-006) 113966604-113993767 retained_intron
ENSMUST00000162396 (Ssh1-005) 113965602-113966756 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VP_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000207622ENST00000384890ENSG00000274598ENST00000612818CIL_0001VP_0002ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214ENSMUSG00000042121ENSMUST00000077689ENSMUST00000112298ENSMUST00000159510ENSMUST00000159592ENSMUST00000162322ENSMUST00000162396
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VP_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000207622ENST00000384890ENSG00000274598ENST00000612818CIL_0001VP_0002ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214ENSMUSG00000042121ENSMUST00000077689ENSMUST00000112298ENSMUST00000159592
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110887 ENST00000228476 N/A N/A 1.298±0.00 0.358±0.00 N/A N/A N/A 3.663±2.02 6.304±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000546552 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547122 N/A N/A N/A N/A 0.034±0.00 N/A N/A 1.204±0.00 N/A N/A N/A 0.034±0.00 0.183±0.00 0.015±0.00
ENST00000547166 N/A N/A 3.965±0.00 N/A 0.032±0.00 0.281±0.00 N/A N/A N/A N/A N/A 0.205±0.00 N/A 0.174±0.07
ENST00000547768 N/A 0.028±0.00 N/A N/A N/A 0.213±0.00 N/A 18.607±0.00 N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000548052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00
ENST00000549215 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.030±0.00
ENST00000551281 N/A N/A N/A 0.841±0.00 0.081±0.00 N/A N/A 1.090±0.00 4.915±0.00 0.042±0.00 N/A N/A N/A 0.261±0.00
ENSG00000207622 ENST00000384890 N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274598 ENST00000612818 0.288±0.00 0.249±0.00 0.706±0.00 N/A 0.335±0.02 0.363±0.00 0.273±0.23 0.194±0.00 0.075±0.00 0.387±0.13 N/A 0.257±0.18 0.065±0.00 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042096 ENSMUST00000086599 N/A 0.012±0.00 N/A 0.034±0.00 0.095±0.04 N/A 0.023±0.01 N/A 0.009±0.00 0.096±0.04 N/A 0.208±0.11 0.672±0.08 0.090±0.00
ENSMUST00000112292 N/A N/A N/A N/A N/A 0.050±0.00 N/A 139.222±44.90 0.020±0.01 0.089±0.00 N/A 0.499±0.17 0.868±0.44 0.078±0.04
ENSMUST00000161610 0.109±0.03 0.011±0.00 N/A 0.104±0.00 0.021±0.00 N/A N/A N/A 0.008±0.00 N/A N/A 0.184±0.00 1.392±0.64 N/A
ENSMUST00000162214 N/A 0.098±0.00 0.057±0.01 0.086±0.06 N/A 0.109±0.00 0.046±0.00 N/A 0.046±0.03 0.087±0.03 0.094±0.06 0.211±0.11 N/A 0.114±0.04
ENSMUSG00000042121 ENSMUST00000077689 N/A N/A N/A N/A 2.715±0.00 1.224±0.00 N/A N/A 1.331±0.14 N/A 0.432±0.06 N/A 4.660±0.22 N/A
ENSMUST00000112298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.978±0.00 N/A
ENSMUST00000159510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159592 7.589±2.49 2.369±1.92 3.751±0.83 2.644±1.47 6.445±1.30 3.468±1.62 2.530±0.62 4.101±0.51 1.273±0.41 9.233±2.53 0.738±0.06 5.313±3.97 3.108±0.84 1.560±0.12
ENSMUST00000162322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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